RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 AKT3Q9Y243 479 aa3.66□□□□□ -1.82
HMGB3P17-201ENST00000504195 CUTAO60888 179 aa3.65□□□□□ -1.83
HMGB3P17-201ENST00000504195 KNG1P01042 644 aa3.65□□□□□ -1.83
HMGB3P17-201ENST00000504195 GCP02774 474 aa3.65□□□□□ -1.83
HMGB3P17-201ENST00000504195 INF2Q27J81 1249 aa3.65□□□□□ -1.83
HMGB3P17-201ENST00000504195 ZMAT1Q5H9K5 638 aa3.65□□□□□ -1.83
HMGB3P17-201ENST00000504195 FBXW10Q5XX13 1052 aa3.65□□□□□ -1.83
HMGB3P17-201ENST00000504195 TMC5Q6UXY8 1006 aa3.65□□□□□ -1.83
HMGB3P17-201ENST00000504195 Q6ZPA2 131 aa3.65□□□□□ -1.83
HMGB3P17-201ENST00000504195 GAREM2Q75VX8 874 aa3.65□□□□□ -1.83
HMGB3P17-201ENST00000504195 RPUSD2Q8IZ73 545 aaKnown RBP3.65□□□□□ -1.83
HMGB3P17-201ENST00000504195 DTX3Q8N9I9 347 aa3.65□□□□□ -1.83
HMGB3P17-201ENST00000504195 TTLL11Q8NHH1 800 aa3.65□□□□□ -1.83
HMGB3P17-201ENST00000504195 FGD4Q96M96 766 aa3.65□□□□□ -1.83
HMGB3P17-201ENST00000504195 CARD11Q9BXL7 1154 aa3.65□□□□□ -1.83
HMGB3P17-201ENST00000504195 SMOC1Q9H4F8 434 aa3.65□□□□□ -1.83
HMGB3P17-201ENST00000504195 GPRC5CQ9NQ84 441 aa3.65□□□□□ -1.83
HMGB3P17-201ENST00000504195 CYP26B1Q9NR63 512 aa3.65□□□□□ -1.83
HMGB3P17-201ENST00000504195 OAZ3Q9UMX2 235 aa3.65□□□□□ -1.83
HMGB3P17-201ENST00000504195 H0Y858 1186 aa3.64□□□□□ -1.83
HMGB3P17-201ENST00000504195 NOP56O00567 594 aaKnown RBP3.64□□□□□ -1.83
HMGB3P17-201ENST00000504195 CDC14BO60729 498 aa3.64□□□□□ -1.83
HMGB3P17-201ENST00000504195 NAT2P11245 290 aa3.64□□□□□ -1.83
HMGB3P17-201ENST00000504195 HHEXQ03014 270 aa3.64□□□□□ -1.83
HMGB3P17-201ENST00000504195 KCNAB2Q13303 367 aa3.64□□□□□ -1.83
HMGB3P17-201ENST00000504195 COLEC12Q5KU26 742 aa3.64□□□□□ -1.83
HMGB3P17-201ENST00000504195 STRIP1Q5VSL9 837 aa3.64□□□□□ -1.83
HMGB3P17-201ENST00000504195 ADGRG3Q86Y34 549 aa3.64□□□□□ -1.83
HMGB3P17-201ENST00000504195 C19orf47Q8N9M1 422 aaKnown RBP3.64□□□□□ -1.83
HMGB3P17-201ENST00000504195 GIPC2Q8TF65 315 aa3.64□□□□□ -1.83
HMGB3P17-201ENST00000504195 NTN5Q8WTR8 489 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P17-201ENST00000504195 TLR9Q9NR96 1032 aa3.64□□□□□ -1.83
HMGB3P17-201ENST00000504195 WASF3Q9UPY6 502 aa3.64□□□□□ -1.83
HMGB3P17-201ENST00000504195 EMC9Q9Y3B6 208 aa3.64□□□□□ -1.83
HMGB3P17-201ENST00000504195 ANKRD34BA5PLL1 514 aa3.63□□□□□ -1.83
HMGB3P17-201ENST00000504195 ZAR1LA6NP61 321 aa3.63□□□□□ -1.83
HMGB3P17-201ENST00000504195 KRIT1O00522 736 aa3.63□□□□□ -1.83
HMGB3P17-201ENST00000504195 CYP27B1O15528 508 aa3.63□□□□□ -1.83
HMGB3P17-201ENST00000504195 DGKIO75912 1065 aa3.63□□□□□ -1.83
HMGB3P17-201ENST00000504195 CKMP06732 381 aa3.63□□□□□ -1.83
HMGB3P17-201ENST00000504195 BCL6P41182 706 aa3.63□□□□□ -1.83
HMGB3P17-201ENST00000504195 COL9A2Q14055 689 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P17-201ENST00000504195 MRPL58Q14197 206 aaKnown RBP3.63□□□□□ -1.83
HMGB3P17-201ENST00000504195 RUFY4Q6ZNE9 571 aa3.63□□□□□ -1.83
HMGB3P17-201ENST00000504195 GPR150Q8NGU9 434 aa3.63□□□□□ -1.83
HMGB3P17-201ENST00000504195 DIO2Q92813 273 aa3.63□□□□□ -1.83
HMGB3P17-201ENST00000504195 SCYL1Q96KG9 808 aa3.63□□□□□ -1.83
HMGB3P17-201ENST00000504195 CRBNQ96SW2 442 aa3.63□□□□□ -1.83
HMGB3P17-201ENST00000504195 GZF1Q9H116 711 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P17-201ENST00000504195 EPB41L1Q9H4G0 881 aa3.63□□□□□ -1.83
HMGB3P17-201ENST00000504195 MYOTQ9UBF9 498 aa3.63□□□□□ -1.83
HMGB3P17-201ENST00000504195 GIT1Q9Y2X7 761 aa3.63□□□□□ -1.83
HMGB3P17-201ENST00000504195 KCNH1O95259 989 aa3.62□□□□□ -1.83
HMGB3P17-201ENST00000504195 ZNF143P52747 638 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P17-201ENST00000504195 CRHR2Q13324 411 aa3.62□□□□□ -1.83
HMGB3P17-201ENST00000504195 LSAMPQ13449 338 aa3.62□□□□□ -1.83
HMGB3P17-201ENST00000504195 NLRP10Q86W26 655 aa3.62□□□□□ -1.83
HMGB3P17-201ENST00000504195 THEMISQ8N1K5 641 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P17-201ENST00000504195 TMEM87AQ8NBN3 555 aa3.62□□□□□ -1.83
HMGB3P17-201ENST00000504195 BVESQ8NE79 360 aa3.62□□□□□ -1.83
HMGB3P17-201ENST00000504195 NPLOC4Q8TAT6 608 aa3.62□□□□□ -1.83
HMGB3P17-201ENST00000504195 FRS2Q8WU20 508 aa3.62□□□□□ -1.83
HMGB3P17-201ENST00000504195 BBC3Q96PG8 261 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P17-201ENST00000504195 APBA2Q99767 749 aa3.62□□□□□ -1.83
HMGB3P17-201ENST00000504195 KCND1Q9NSA2 647 aa3.62□□□□□ -1.83
HMGB3P17-201ENST00000504195 CEP72Q9P209 647 aa3.62□□□□□ -1.83
HMGB3P17-201ENST00000504195 ARHGAP20Q9P2F6 1191 aa3.62□□□□□ -1.83
HMGB3P17-201ENST00000504195 ASH2LQ9UBL3 628 aa3.62□□□□□ -1.83
HMGB3P17-201ENST00000504195 NUB1Q9Y5A7 615 aa3.62□□□□□ -1.83
HMGB3P17-201ENST00000504195 ENO2P09104 434 aaPredicted RBP3.61□□□□□ -1.83
HMGB3P17-201ENST00000504195 POLD1P28340 1107 aa3.61□□□□□ -1.83
HMGB3P17-201ENST00000504195 ZNF76P36508 570 aa3.61□□□□□ -1.83
HMGB3P17-201ENST00000504195 TESK1Q15569 626 aa3.61□□□□□ -1.83
HMGB3P17-201ENST00000504195 ADGRE4PQ86SQ3 457 aa3.61□□□□□ -1.83
HMGB3P17-201ENST00000504195 PROSER1Q86XN7 944 aa3.61□□□□□ -1.83
HMGB3P17-201ENST00000504195 TMPRSS6Q8IU80 811 aa3.61□□□□□ -1.83
HMGB3P17-201ENST00000504195 OR6P1Q8NGX9 317 aa3.61□□□□□ -1.83
HMGB3P17-201ENST00000504195 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.61□□□□□ -1.83
HMGB3P17-201ENST00000504195 DPYSL5Q9BPU6 564 aa3.61□□□□□ -1.83
HMGB3P17-201ENST00000504195 NKX2-4Q9H2Z4 354 aa3.61□□□□□ -1.83
HMGB3P17-201ENST00000504195 C12orf65Q9H3J6 166 aaKnown RBP3.61□□□□□ -1.83
HMGB3P17-201ENST00000504195 NELFAQ9H3P2 528 aa3.61□□□□□ -1.83
HMGB3P17-201ENST00000504195 ZFP69BQ9UJL9 534 aa3.61□□□□□ -1.83
HMGB3P17-201ENST00000504195 KRTAP23-1A1A580 65 aa3.6□□□□□ -1.83
HMGB3P17-201ENST00000504195 MEFVO15553 781 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P17-201ENST00000504195 ZNF888P0CJ79 500 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P17-201ENST00000504195 PROZP22891 400 aa3.6□□□□□ -1.83
HMGB3P17-201ENST00000504195 NFYCQ13952 458 aa3.6□□□□□ -1.83
HMGB3P17-201ENST00000504195 SKIDA1Q1XH10 827 aa3.6□□□□□ -1.83
HMGB3P17-201ENST00000504195 ACBD5Q5T8D3 534 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P17-201ENST00000504195 GTF2IRD2BQ6EKJ0 949 aa3.6□□□□□ -1.83
HMGB3P17-201ENST00000504195 DPP8Q6V1X1 898 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P17-201ENST00000504195 GTF2IRD2Q86UP8 949 aa3.6□□□□□ -1.83
HMGB3P17-201ENST00000504195 SGMS1Q86VZ5 419 aa3.6□□□□□ -1.83
HMGB3P17-201ENST00000504195 TRIM59Q8IWR1 403 aa3.6□□□□□ -1.83
HMGB3P17-201ENST00000504195 ZNF513Q8N8E2 541 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P17-201ENST00000504195 MICAL1Q8TDZ2 1067 aa3.6□□□□□ -1.83
HMGB3P17-201ENST00000504195 CHAMP1Q96JM3 812 aa3.6□□□□□ -1.83
HMGB3P17-201ENST00000504195 PLA2G12BQ9BX93 195 aa3.6□□□□□ -1.83
HMGB3P17-201ENST00000504195 KRTAP1-5Q9BYS1 174 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms