RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 PCNAP12004 261 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 KRT32Q14532 448 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 UNC45BQ8IWX7 931 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 SCAIQ8N9R8 606 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 OSBP2Q969R2 916 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 E2F7Q96AV8 911 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 CLIP3Q96DZ5 547 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 ZNF285Q96NJ3 590 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 HERC2P3Q9BVR0 1158 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 RHOBTB2Q9BYZ6 727 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 N4BP3O15049 544 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 SSX5O60225 188 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 CBFA2T3O75081 653 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 GDI1P31150 447 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 COPB1P53618 953 aaKnown RBP6.74□□□□□ -1.33
CLCN3-204ENST00000504131 IST1P53990 364 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 GRIK3Q13003 919 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 IFIT5Q13325 482 aaKnown RBP6.74□□□□□ -1.33
CLCN3-204ENST00000504131 TAF1CQ15572 869 aaPredicted RBP6.74□□□□□ -1.33
CLCN3-204ENST00000504131 PROSER3Q2NL68 480 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 TRIM60Q495X7 471 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 NSMCE1Q8WV22 266 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 GDAP1L1Q96MZ0 367 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 RAB3IPQ96QF0 476 aaPredicted RBP6.74□□□□□ -1.33
CLCN3-204ENST00000504131 PCDH18Q9HCL0 1135 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 PTPRHQ9HD43 1115 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 WDR6Q9NNW5 1121 aaKnown RBP6.74□□□□□ -1.33
CLCN3-204ENST00000504131 BTBD7Q9P203 1132 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 MTRRQ9UBK8 725 aa6.74□□□□□ -1.33
CLCN3-204ENST00000504131 EIF2B4Q9UI10 523 aaKnown RBP6.74□□□□□ -1.33
CLCN3-204ENST00000504131 SCAF8Q9UPN6 1271 aaKnown RBP6.74□□□□□ -1.33
CLCN3-204ENST00000504131 TTC34A8MYJ7 566 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 MYL6BP14649 208 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 ATP4AP20648 1035 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 PTGS1P23219 599 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 EEF1GP26641 437 aaKnown RBP6.73□□□□□ -1.33
CLCN3-204ENST00000504131 TUBB4BP68371 445 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 PSME1Q06323 249 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 MINDY4Q4G0A6 757 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 CCDC138Q96M89 665 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 MNTQ99583 582 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 APOL5Q9BWW9 433 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 TMEM245Q9H330 911 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 NUP155O75694 1391 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 ARIH2O95376 493 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 HOXD12P35452 270 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 SKIV2L2P42285 1042 aaKnown RBP6.73□□□□□ -1.33
CLCN3-204ENST00000504131 MAGEA10P43363 369 aaPredicted RBP6.73□□□□□ -1.33
CLCN3-204ENST00000504131 AMPHP49418 695 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 COPAP53621 1224 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 MRPS9P82933 396 aaKnown RBP6.73□□□□□ -1.33
CLCN3-204ENST00000504131 DNAJC3Q13217 504 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 MAPRE1Q15691 268 aaKnown RBP6.73□□□□□ -1.33
CLCN3-204ENST00000504131 SLFNL1Q499Z3 407 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 MDH1BQ5I0G3 518 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 PDXDC1Q6P996 788 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 LARGE2Q8N3Y3 721 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 HDAC7Q8WUI4 952 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 RMDN1Q96DB5 314 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 MAML3Q96JK9 1138 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 CNDP1Q96KN2 507 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 PIF1Q9H611 641 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 PSD3Q9NYI0 1048 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 ARHGEF11O15085 1522 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 ARHGAP5Q13017 1502 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 MEN1O00255 615 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 ATP9AO75110 1047 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 KCNH1O95259 989 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 THEGLP0DJG4 465 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 BCRP11274 1271 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 ADCY8P40145 1251 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 AGR3Q8TD06 166 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 EHD1Q9H4M9 534 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 SLC45A1Q9Y2W3 748 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 TELO2Q9Y4R8 837 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 IPPQ9Y573 584 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.73□□□□□ -1.33
CLCN3-204ENST00000504131 CTAGE15A4D2H0 777 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 E7EVH7 732 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 KCNQ3O43525 872 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 MAP3K6O95382 1288 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 TUBBP07437 444 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 CTAGE8P0CG41 777 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 HMOX2P30519 316 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 SERPINB4P48594 390 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 YARSP54577 528 aaKnown RBP6.73□□□□□ -1.33
CLCN3-204ENST00000504131 DEPDC1Q5TB30 811 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 HIBCHQ6NVY1 386 aaPredicted RBP6.73□□□□□ -1.33
CLCN3-204ENST00000504131 CABP7Q86V35 215 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 MCF2L2Q86YR7 1114 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 CTAGE4Q8IX94 777 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 ARFGAP2Q8N6H7 521 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 PHF21AQ96BD5 680 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 RBM14Q96PK6 669 aaKnown RBP6.73□□□□□ -1.33
CLCN3-204ENST00000504131 NUP88Q99567 741 aaPredicted RBP6.73□□□□□ -1.33
CLCN3-204ENST00000504131 CRNKL1Q9BZJ0 848 aaKnown RBP6.73□□□□□ -1.33
CLCN3-204ENST00000504131 KLHL25Q9H0H3 589 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 CCDC177Q9NQR7 707 aaPredicted RBP6.73□□□□□ -1.33
CLCN3-204ENST00000504131 CCDC87Q9NVE4 849 aa6.73□□□□□ -1.33
CLCN3-204ENST00000504131 ATAD3AQ9NVI7 634 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms