RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 NEUROD2Q15784 382 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 WASHC4Q2M389 1173 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 ANO6Q4KMQ2 910 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 NUTM2GQ5VZR2 741 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 ALS2CLQ60I27 953 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 CCDC102BQ68D86 513 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 RUFY4Q6ZNE9 571 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 COPS6Q7L5N1 327 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 CNGA4Q8IV77 575 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 LMNTD2Q8IXW0 634 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 CHCHD4Q8N4Q1 142 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 XAGE3Q8WTP9 111 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 DYDC1Q8WWB3 177 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 IFT74Q96LB3 600 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 ALS2CR12Q96Q35 445 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 AP1M1Q9BXS5 423 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 UBA5Q9GZZ9 404 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 VCXQ9H320 206 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 PDRG1Q9NUG6 133 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 TUBA8Q9NY65 449 aaPredicted RBP3.09□□□□□ -1.92
NEDD4-204ENST00000503468 LARSQ9P2J5 1176 aaKnown RBP3.09□□□□□ -1.92
NEDD4-204ENST00000503468 AKAP2Q9Y2D5 859 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 SF3B1O75533 1304 aaKnown RBP eCLIP3.09□□□□□ -1.92
NEDD4-204ENST00000503468 GBF1Q92538 1859 aa3.09□□□□□ -1.92
NEDD4-204ENST00000503468 ANO9A1A5B4 782 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 NUTM2FA1L443 756 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 HNRNPH1P31943 449 aaKnown RBP3.08□□□□□ -1.92
NEDD4-204ENST00000503468 MYL5Q02045 173 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 ZNF33AQ06730 810 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 CUL3Q13618 768 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 DBN1Q16643 649 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 TXNRD1Q16881 649 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 TRIM71Q2Q1W2 868 aaKnown RBP3.08□□□□□ -1.92
NEDD4-204ENST00000503468 HGSNATQ68CP4 663 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 OLFM4Q6UX06 510 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 RGS9BPQ6ZS82 235 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 CCDC121Q6ZUS5 278 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 SH2D5Q6ZV89 423 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 RTL10Q7L3V2 364 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 CCDC146Q8IYE0 955 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 CBARPQ8N350 705 aaPredicted RBP3.08□□□□□ -1.92
NEDD4-204ENST00000503468 SH2D3CQ8N5H7 860 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 PRPF38AQ8NAV1 312 aaKnown RBP3.08□□□□□ -1.92
NEDD4-204ENST00000503468 ZNF483Q8TF39 744 aaPredicted RBP3.08□□□□□ -1.92
NEDD4-204ENST00000503468 TSR2Q969E8 191 aaKnown RBP3.08□□□□□ -1.92
NEDD4-204ENST00000503468 FAF2Q96CS3 445 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 GSDMAQ96QA5 445 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 C7orf25Q9BPX7 421 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 NYXQ9GZU5 481 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 KCTD10Q9H3F6 313 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 HAUS4Q9H6D7 363 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 NRDE2Q9H7Z3 1164 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 PPP1R1BQ9UD71 204 aaPredicted RBP3.08□□□□□ -1.92
NEDD4-204ENST00000503468 SSUH2Q9Y2M2 353 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 PPP1R12BO60237 982 aaPredicted RBP3.08□□□□□ -1.92
NEDD4-204ENST00000503468 ATP2B4P23634 1241 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 VAV2P52735 878 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 COPAP53621 1224 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 CNTN2Q02246 1040 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 GRIK3Q13003 919 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 DNAJC14Q6Y2X3 702 aaPredicted RBP3.08□□□□□ -1.92
NEDD4-204ENST00000503468 SYNE3Q6ZMZ3 975 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 RSRC2Q7L4I2 434 aaKnown RBP3.08□□□□□ -1.92
NEDD4-204ENST00000503468 PACS2Q86VP3 889 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 CNNM3Q8NE01 707 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 COG1Q8WTW3 980 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 CCDC114Q96M63 670 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 GDAP1L1Q96MZ0 367 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 RBM42Q9BTD8 480 aaKnown RBP3.08□□□□□ -1.92
NEDD4-204ENST00000503468 KCNF1Q9H3M0 494 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 FAM198AQ9UFP1 575 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 DBR1Q9UK59 544 aaKnown RBP3.08□□□□□ -1.92
NEDD4-204ENST00000503468 PCDHGC5Q9Y5F6 944 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 ANKRD36A6QL64 1941 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 GOLGA6CA6NDK9 693 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 E7ENQ6 273 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 MEIS2O14770 477 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 CDKL5O76039 1030 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 FESP07332 822 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 GSTA1P08263 222 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 GSTA2P09210 222 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 PAEPP09466 180 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 GOLGA6DP0CG33 693 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 NPEPPSP55786 919 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 LRMPQ12912 555 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 CASP8Q14790 479 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 BEND6Q5SZJ8 279 aaPredicted RBP3.08□□□□□ -1.92
NEDD4-204ENST00000503468 NUTM2DQ5VT03 806 aaPredicted RBP3.08□□□□□ -1.92
NEDD4-204ENST00000503468 TRIM65Q6PJ69 517 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 BLOC1S2Q6QNY1 142 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 TTC6Q86TZ1 520 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 TMTC1Q8IUR5 882 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 NUTM2AQ8IVF1 878 aaPredicted RBP3.08□□□□□ -1.92
NEDD4-204ENST00000503468 TBC1D16Q8TBP0 767 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 FNIP1Q8TF40 1166 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 MRPS27Q92552 414 aaKnown RBP3.08□□□□□ -1.92
NEDD4-204ENST00000503468 RUSC1Q9BVN2 902 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 ZNF446Q9NWS9 450 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 GOLGA6AQ9NYA3 693 aa3.08□□□□□ -1.92
NEDD4-204ENST00000503468 RGL1Q9NZL6 768 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms