RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 RPN1P04843 607 aaKnown RBP9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 PRR29P0C7W0 189 aa9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 PLA2G4BP0C869 781 aa9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 SPATA31C1P0DKV0 1188 aa9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 XRCC6P12956 609 aaKnown RBP eCLIP9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 ERCC5P28715 1186 aaPredicted RBP9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 ASIC1P78348 528 aa9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 CNTN2Q02246 1040 aa9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 PSMD2Q13200 908 aa9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 IRF5Q13568 498 aa9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 ZNF658Q5TYW1 1059 aaPredicted RBP9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 UNC13DQ70J99 1090 aa9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 GPR142Q7Z601 462 aa9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 PLEKHH3Q7Z736 793 aa9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 GRAMD1CQ8IYS0 662 aa9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 SYT2Q8N9I0 419 aaPredicted RBP9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 GJA10Q969M2 543 aa9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 PLIN2Q99541 437 aa9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 MTRQ99707 1265 aa9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 UNC45AQ9H3U1 944 aa9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 EFCC1Q9HA90 598 aa9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 CBX8Q9HC52 389 aa9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 JPH1Q9HDC5 661 aaPredicted RBP9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 CREBZFQ9NS37 354 aa9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 EXOC1Q9NV70 894 aa9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 SAMM50Q9Y512 469 aa9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 PCDHA10Q9Y5I2 948 aa9.08□□□□□ -0.96
TOPBP1-202ENST00000503338 ADGRA2Q96PE1 1338 aa9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 POTEB3A0JP26 581 aa9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 EML1O00423 815 aa9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 IGF2BP3O00425 579 aaKnown RBP eCLIP9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 BIN1O00499 593 aa9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 CA12O43570 354 aa9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 CHMP2AO43633 222 aa9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 SLITRK3O94933 977 aa9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 KIF20AO95235 890 aa9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 PSAPP07602 524 aa9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 KCNA2P16389 499 aa9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 ADORA2AP29274 412 aa9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 QARSP47897 775 aaKnown RBP9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 PSMC5P62195 406 aa9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 ITGB3BPQ13352 177 aaPredicted RBP9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 CUL4BQ13620 913 aa9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 GRB14Q14449 540 aa9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 MCM6Q14566 821 aa9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 ZNF792Q3KQV3 632 aa9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 DPCR1Q3MIW9 517 aa9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 COBLL1Q53SF7 1204 aa9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 MIS18BP1Q6P0N0 1132 aa9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 POTEBQ6S5H4 581 aa9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 TPH2Q8IWU9 490 aa9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 CCDC65Q8IXS2 484 aa9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 C4orf19Q8IY42 314 aa9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 RNF214Q8ND24 703 aa9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 DDX12PQ92771 950 aa9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 ERCC4Q92889 916 aaPredicted RBP9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 ATP6V0A1Q93050 837 aa9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 PURBQ96QR8 312 aaKnown RBP9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 NUDT12Q9BQG2 462 aa9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 TIPINQ9BVW5 301 aa9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 PORCNQ9H237 461 aa9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 SLC9A2Q9UBY0 812 aa9.07□□□□□ -0.96
TOPBP1-202ENST00000503338 POTEFA5A3E0 1075 aa9.06□□□□□ -0.96
TOPBP1-202ENST00000503338 RASSF10A6NK89 507 aa9.06□□□□□ -0.96
TOPBP1-202ENST00000503338 RGS20O76081 388 aa9.06□□□□□ -0.96
TOPBP1-202ENST00000503338 DEKP35659 375 aaKnown RBP9.06□□□□□ -0.96
TOPBP1-202ENST00000503338 SLC12A3P55017 1021 aa9.06□□□□□ -0.96
TOPBP1-202ENST00000503338 MYL5Q02045 173 aa9.06□□□□□ -0.96
TOPBP1-202ENST00000503338 TTLL4Q14679 1199 aa9.06□□□□□ -0.96
TOPBP1-202ENST00000503338 IQCB1Q15051 598 aa9.06□□□□□ -0.96
TOPBP1-202ENST00000503338 ECM1Q16610 540 aa9.06□□□□□ -0.96
TOPBP1-202ENST00000503338 KMT5BQ4FZB7 885 aa9.06□□□□□ -0.96
TOPBP1-202ENST00000503338 POTEGQ6S5H5 508 aa9.06□□□□□ -0.96
TOPBP1-202ENST00000503338 C17orf99Q6UX52 265 aa9.06□□□□□ -0.96
TOPBP1-202ENST00000503338 MAMDC4Q6UXC1 1216 aa9.06□□□□□ -0.96
TOPBP1-202ENST00000503338 C11orf57Q6ZUT1 292 aaPredicted RBP9.06□□□□□ -0.96
TOPBP1-202ENST00000503338 PAXIP1Q6ZW49 1069 aaPredicted RBP9.06□□□□□ -0.96
TOPBP1-202ENST00000503338 OTUD6AQ7L8S5 288 aa9.06□□□□□ -0.96
TOPBP1-202ENST00000503338 DPP9Q86TI2 863 aa9.06□□□□□ -0.96
TOPBP1-202ENST00000503338 GPBP1Q86WP2 473 aa9.06□□□□□ -0.96
TOPBP1-202ENST00000503338 ENOX1Q8TC92 643 aaKnown RBP9.06□□□□□ -0.96
TOPBP1-202ENST00000503338 SOCS4Q8WXH5 440 aa9.06□□□□□ -0.96
TOPBP1-202ENST00000503338 DYDC2Q96IM9 177 aa9.06□□□□□ -0.96
TOPBP1-202ENST00000503338 LXNQ9BS40 222 aa9.06□□□□□ -0.96
TOPBP1-202ENST00000503338 BLZF1Q9H2G9 400 aa9.06□□□□□ -0.96
TOPBP1-202ENST00000503338 VTA1Q9NP79 307 aa9.06□□□□□ -0.96
TOPBP1-202ENST00000503338 DBR1Q9UK59 544 aaKnown RBP9.06□□□□□ -0.96
TOPBP1-202ENST00000503338 ASTN1O14525 1302 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 SYNGAP1Q96PV0 1343 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 BICDL2A1A5D9 508 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 ARHGEF35A5YM69 484 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 MYMKA6NI61 221 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 E9PMD0 336 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 DDX39AO00148 427 aaKnown RBP9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 PSMA7O14818 248 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 KLRC4O43908 158 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 PEX10O60683 326 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 ATP9AO75110 1047 aa9.05□□□□□ -0.96
TOPBP1-202ENST00000503338 ATG7O95352 703 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms