RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 NR5A1Q13285 461 aa12.16□□□□□ -0.46
UBE2D3-212ENST00000502563 PRR16Q569H4 304 aa12.16□□□□□ -0.46
UBE2D3-212ENST00000502563 PRPF38BQ5VTL8 546 aaKnown RBP12.16□□□□□ -0.46
UBE2D3-212ENST00000502563 PIK3AP1Q6ZUJ8 805 aa12.16□□□□□ -0.46
UBE2D3-212ENST00000502563 PLPPR4Q7Z2D5 763 aa12.16□□□□□ -0.46
UBE2D3-212ENST00000502563 NOSTRINQ8IVI9 506 aa12.16□□□□□ -0.46
UBE2D3-212ENST00000502563 AFAP1L1Q8TED9 768 aa12.16□□□□□ -0.46
UBE2D3-212ENST00000502563 SLC5A5Q92911 643 aa12.16□□□□□ -0.46
UBE2D3-212ENST00000502563 ZNF577Q9BSK1 485 aa12.16□□□□□ -0.46
UBE2D3-212ENST00000502563 GJB4Q9NTQ9 266 aa12.16□□□□□ -0.46
UBE2D3-212ENST00000502563 SMC3Q9UQE7 1217 aa12.16□□□□□ -0.46
UBE2D3-212ENST00000502563 DNAH12Q6ZR08 3092 aa12.15□□□□□ -0.46
UBE2D3-212ENST00000502563 H3BRB1 525 aa12.15□□□□□ -0.46
UBE2D3-212ENST00000502563 TLR3O15455 904 aaKnown RBP12.15□□□□□ -0.46
UBE2D3-212ENST00000502563 MSH4O15457 936 aa12.15□□□□□ -0.46
UBE2D3-212ENST00000502563 PSMD10O75832 226 aa12.15□□□□□ -0.46
UBE2D3-212ENST00000502563 MYL3P08590 195 aa12.15□□□□□ -0.46
UBE2D3-212ENST00000502563 CLTBP09497 229 aa12.15□□□□□ -0.46
UBE2D3-212ENST00000502563 PTGS1P23219 599 aa12.15□□□□□ -0.46
UBE2D3-212ENST00000502563 FAAP100Q0VG06 881 aa12.15□□□□□ -0.46
UBE2D3-212ENST00000502563 INF2Q27J81 1249 aa12.15□□□□□ -0.46
UBE2D3-212ENST00000502563 TRIM60Q495X7 471 aa12.15□□□□□ -0.46
UBE2D3-212ENST00000502563 SLFN12Q8IYM2 578 aa12.15□□□□□ -0.46
UBE2D3-212ENST00000502563 DPF3Q92784 378 aa12.15□□□□□ -0.46
UBE2D3-212ENST00000502563 FERMT2Q96AC1 680 aa12.15□□□□□ -0.46
UBE2D3-212ENST00000502563 SMARCAD1Q9H4L7 1026 aa12.15□□□□□ -0.46
UBE2D3-212ENST00000502563 TUT1Q9H6E5 874 aaKnown RBP12.15□□□□□ -0.46
UBE2D3-212ENST00000502563 ERAP1Q9NZ08 941 aa12.15□□□□□ -0.46
UBE2D3-212ENST00000502563 DDX25Q9UHL0 483 aaKnown RBP12.15□□□□□ -0.46
UBE2D3-212ENST00000502563 GTF2IRD1Q9UHL9 959 aa12.15□□□□□ -0.46
UBE2D3-212ENST00000502563 TBX21Q9UL17 535 aa12.15□□□□□ -0.46
UBE2D3-212ENST00000502563 GSTTP1A0A1W2PQM5 241 aa12.14□□□□□ -0.47
UBE2D3-212ENST00000502563 WDR64B1ANS9 1081 aa12.14□□□□□ -0.47
UBE2D3-212ENST00000502563 BMP8BP34820 402 aa12.14□□□□□ -0.47
UBE2D3-212ENST00000502563 TCF7P36402 384 aaPredicted RBP12.14□□□□□ -0.47
UBE2D3-212ENST00000502563 PSEN2P49810 448 aa12.14□□□□□ -0.47
UBE2D3-212ENST00000502563 JAK3P52333 1124 aa12.14□□□□□ -0.47
UBE2D3-212ENST00000502563 ATN1P54259 1190 aaPredicted RBP12.14□□□□□ -0.47
UBE2D3-212ENST00000502563 ACTR2P61160 394 aa12.14□□□□□ -0.47
UBE2D3-212ENST00000502563 TLE2Q04725 743 aa12.14□□□□□ -0.47
UBE2D3-212ENST00000502563 PPP2R5CQ13362 524 aa12.14□□□□□ -0.47
UBE2D3-212ENST00000502563 MFSD10Q14728 455 aa12.14□□□□□ -0.47
UBE2D3-212ENST00000502563 LETM2Q2VYF4 491 aa12.14□□□□□ -0.47
UBE2D3-212ENST00000502563 NBPF20Q3BBV1 942 aa12.14□□□□□ -0.47
UBE2D3-212ENST00000502563 EARS2Q5JPH6 523 aaKnown RBP12.14□□□□□ -0.47
UBE2D3-212ENST00000502563 ABHD15Q6UXT9 468 aa12.14□□□□□ -0.47
UBE2D3-212ENST00000502563 ZFP91Q96JP5 570 aaPredicted RBP12.14□□□□□ -0.47
UBE2D3-212ENST00000502563 PDLIM7Q9NR12 457 aa12.14□□□□□ -0.47
UBE2D3-212ENST00000502563 TCEAL9Q9UHQ7 104 aa12.14□□□□□ -0.47
UBE2D3-212ENST00000502563 NRCAMQ92823 1304 aa12.13□□□□□ -0.47
UBE2D3-212ENST00000502563 A0A1W2PPC1 479 aa12.13□□□□□ -0.47
UBE2D3-212ENST00000502563 LAD1O00515 517 aa12.13□□□□□ -0.47
UBE2D3-212ENST00000502563 CCNT1O60563 726 aaKnown RBP12.13□□□□□ -0.47
UBE2D3-212ENST00000502563 CAND2O75155 1236 aa12.13□□□□□ -0.47
UBE2D3-212ENST00000502563 PARNO95453 639 aaKnown RBP12.13□□□□□ -0.47
UBE2D3-212ENST00000502563 TDP2O95551 362 aa12.13□□□□□ -0.47
UBE2D3-212ENST00000502563 CCNE2O96020 404 aa12.13□□□□□ -0.47
UBE2D3-212ENST00000502563 GNAT1P11488 350 aa12.13□□□□□ -0.47
UBE2D3-212ENST00000502563 ADAM17P78536 824 aa12.13□□□□□ -0.47
UBE2D3-212ENST00000502563 KIAA0753Q2KHM9 967 aa12.13□□□□□ -0.47
UBE2D3-212ENST00000502563 RILPL1Q5EBL4 403 aa12.13□□□□□ -0.47
UBE2D3-212ENST00000502563 MIS18BP1Q6P0N0 1132 aa12.13□□□□□ -0.47
UBE2D3-212ENST00000502563 FAM43BQ6ZT52 329 aaPredicted RBP12.13□□□□□ -0.47
UBE2D3-212ENST00000502563 RPAINQ86UA6 219 aa12.13□□□□□ -0.47
UBE2D3-212ENST00000502563 HSCBQ8IWL3 235 aa12.13□□□□□ -0.47
UBE2D3-212ENST00000502563 CAGE1Q8TC20 777 aa12.13□□□□□ -0.47
UBE2D3-212ENST00000502563 VTI1AQ96AJ9 217 aa12.13□□□□□ -0.47
UBE2D3-212ENST00000502563 TEKT3Q9BXF9 490 aa12.13□□□□□ -0.47
UBE2D3-212ENST00000502563 AZI2Q9H6S1 392 aa12.13□□□□□ -0.47
UBE2D3-212ENST00000502563 BCAS3Q9H6U6 928 aa12.13□□□□□ -0.47
UBE2D3-212ENST00000502563 PRKAG2Q9UGJ0 569 aa12.13□□□□□ -0.47
UBE2D3-212ENST00000502563 PCDHA10Q9Y5I2 948 aa12.13□□□□□ -0.47
UBE2D3-212ENST00000502563 MAFBQ9Y5Q3 323 aaPredicted RBP12.13□□□□□ -0.47
UBE2D3-212ENST00000502563 IGSF9BQ9UPX0 1349 aa12.12□□□□□ -0.47
UBE2D3-212ENST00000502563 LTBP2Q14767 1821 aa12.12□□□□□ -0.47
UBE2D3-212ENST00000502563 SLC37A4O43826 429 aa12.12□□□□□ -0.47
UBE2D3-212ENST00000502563 B4GALT4O60513 344 aa12.12□□□□□ -0.47
UBE2D3-212ENST00000502563 GAS7O60861 476 aa12.12□□□□□ -0.47
UBE2D3-212ENST00000502563 PSAPP07602 524 aa12.12□□□□□ -0.47
UBE2D3-212ENST00000502563 LRCH2Q5VUJ6 765 aa12.12□□□□□ -0.47
UBE2D3-212ENST00000502563 FAM160B1Q5W0V3 765 aa12.12□□□□□ -0.47
UBE2D3-212ENST00000502563 LARP1BQ659C4 914 aaKnown RBP12.12□□□□□ -0.47
UBE2D3-212ENST00000502563 BRAPQ7Z569 592 aa12.12□□□□□ -0.47
UBE2D3-212ENST00000502563 C7orf61Q8IZ16 206 aa12.12□□□□□ -0.47
UBE2D3-212ENST00000502563 C7orf31Q8N865 590 aa12.12□□□□□ -0.47
UBE2D3-212ENST00000502563 HAS1Q92839 578 aa12.12□□□□□ -0.47
UBE2D3-212ENST00000502563 DCBLD2Q96PD2 775 aa12.12□□□□□ -0.47
UBE2D3-212ENST00000502563 MTMR9Q96QG7 549 aa12.12□□□□□ -0.47
UBE2D3-212ENST00000502563 PCYT2Q99447 389 aa12.12□□□□□ -0.47
UBE2D3-212ENST00000502563 PRO3102Q9H379 93 aa12.12□□□□□ -0.47
UBE2D3-212ENST00000502563 NOL7Q9UMY1 257 aaKnown RBP12.12□□□□□ -0.47
UBE2D3-212ENST00000502563 ATP11BQ9Y2G3 1177 aa12.12□□□□□ -0.47
UBE2D3-212ENST00000502563 DOCK5Q9H7D0 1870 aa12.11□□□□□ -0.47
UBE2D3-212ENST00000502563 COL1A2P08123 1366 aa12.11□□□□□ -0.47
UBE2D3-212ENST00000502563 MBLAC1A4D2B0 266 aaPredicted RBP12.11□□□□□ -0.47
UBE2D3-212ENST00000502563 RRN3P2A6NIE6 340 aa12.11□□□□□ -0.47
UBE2D3-212ENST00000502563 H3BQV1 296 aa12.11□□□□□ -0.47
UBE2D3-212ENST00000502563 NEMFO60524 1076 aa12.11□□□□□ -0.47
UBE2D3-212ENST00000502563 PQBP1O60828 265 aaKnown RBP12.11□□□□□ -0.47
UBE2D3-212ENST00000502563 BAG4O95429 457 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms