RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	TBC1D22B	Q9NU19	505 aa		13.67	□□□□□ -0.22
MATR3-231	ENST00000502394	USP25	Q9UHP3	1055 aa		13.67	□□□□□ -0.22
MATR3-231	ENST00000502394	RBM47	A0AV96	593 aa	Known RBP	13.66	□□□□□ -0.22
MATR3-231	ENST00000502394	GAS7	O60861	476 aa		13.66	□□□□□ -0.22
MATR3-231	ENST00000502394	TXLNA	P40222	546 aa		13.66	□□□□□ -0.22
MATR3-231	ENST00000502394	LACTB	P83111	547 aa	Predicted RBP	13.66	□□□□□ -0.22
MATR3-231	ENST00000502394	MDM2	Q00987	491 aa	Predicted RBP	13.66	□□□□□ -0.22
MATR3-231	ENST00000502394	CAP1	Q01518	475 aa		13.66	□□□□□ -0.22
MATR3-231	ENST00000502394	ECM1	Q16610	540 aa		13.66	□□□□□ -0.22
MATR3-231	ENST00000502394	ZSCAN23	Q3MJ62	389 aa		13.66	□□□□□ -0.22
MATR3-231	ENST00000502394	PDXDC2P	Q6P474	469 aa		13.66	□□□□□ -0.22
MATR3-231	ENST00000502394	ARMCX2	Q7L311	632 aa		13.66	□□□□□ -0.22
MATR3-231	ENST00000502394	MSL3	Q8N5Y2	521 aa	Known RBP	13.66	□□□□□ -0.22
MATR3-231	ENST00000502394	SNX29	Q8TEQ0	813 aa		13.66	□□□□□ -0.22
MATR3-231	ENST00000502394	MPHOSPH6	Q99547	160 aa	Known RBP	13.66	□□□□□ -0.22
MATR3-231	ENST00000502394	SERTAD1	Q9UHV2	236 aa		13.66	□□□□□ -0.22
MATR3-231	ENST00000502394	KIAA1217	Q5T5P2	1943 aa		13.66	□□□□□ -0.22
MATR3-231	ENST00000502394	SYNGAP1	Q96PV0	1343 aa		13.65	□□□□□ -0.22
MATR3-231	ENST00000502394	MGAM	O43451	1857 aa		13.65	□□□□□ -0.22
MATR3-231	ENST00000502394	ZSWIM8	A7E2V4	1837 aa		13.65	□□□□□ -0.22
MATR3-231	ENST00000502394	MED24	O75448	989 aa		13.65	□□□□□ -0.22
MATR3-231	ENST00000502394	TBC1D8	O95759	1140 aa		13.65	□□□□□ -0.22
MATR3-231	ENST00000502394	SNAI1	O95863	264 aa	Predicted RBP	13.65	□□□□□ -0.22
MATR3-231	ENST00000502394	SLFN14	P0C7P3	912 aa		13.65	□□□□□ -0.22
MATR3-231	ENST00000502394	SPATA31C1	P0DKV0	1188 aa		13.65	□□□□□ -0.22
MATR3-231	ENST00000502394	TGFB3	P10600	412 aa		13.65	□□□□□ -0.22
MATR3-231	ENST00000502394	HSPA6	P17066	643 aa		13.65	□□□□□ -0.22
MATR3-231	ENST00000502394	PLCG1	P19174	1290 aa		13.65	□□□□□ -0.22
MATR3-231	ENST00000502394	SP2	Q02086	613 aa		13.65	□□□□□ -0.22
MATR3-231	ENST00000502394	IRF5	Q13568	498 aa		13.65	□□□□□ -0.22
MATR3-231	ENST00000502394	EPHA7	Q15375	998 aa		13.65	□□□□□ -0.22
MATR3-231	ENST00000502394	KRT79	Q5XKE5	535 aa		13.65	□□□□□ -0.22
MATR3-231	ENST00000502394	NCAPH2	Q6IBW4	605 aa		13.65	□□□□□ -0.22
MATR3-231	ENST00000502394	GPR153	Q6NV75	609 aa		13.65	□□□□□ -0.22
MATR3-231	ENST00000502394	CCDC62	Q6P9F0	684 aa		13.65	□□□□□ -0.22
MATR3-231	ENST00000502394	DPP9	Q86TI2	863 aa		13.65	□□□□□ -0.22
MATR3-231	ENST00000502394	PDILT	Q8N807	584 aa		13.65	□□□□□ -0.22
MATR3-231	ENST00000502394	IQUB	Q8NA54	791 aa		13.65	□□□□□ -0.22
MATR3-231	ENST00000502394	TMC2	Q8TDI7	906 aa		13.65	□□□□□ -0.22
MATR3-231	ENST00000502394	SOCS4	Q8WXH5	440 aa		13.65	□□□□□ -0.22
MATR3-231	ENST00000502394	TRIM47	Q96LD4	638 aa		13.65	□□□□□ -0.22
MATR3-231	ENST00000502394	MTR	Q99707	1265 aa		13.65	□□□□□ -0.22
MATR3-231	ENST00000502394	HSD17B14	Q9BPX1	270 aa		13.65	□□□□□ -0.22
MATR3-231	ENST00000502394	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.65	□□□□□ -0.22
MATR3-231	ENST00000502394	BLOC1S4	Q9NUP1	217 aa		13.65	□□□□□ -0.22
MATR3-231	ENST00000502394	MCM3AP	O60318	1980 aa		13.65	□□□□□ -0.22
MATR3-231	ENST00000502394	KDM3A	Q9Y4C1	1321 aa		13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	TNPO2	O14787	897 aa	Known RBP	13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	CTAGE5	O15320	804 aa		13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	ARIH2	O95376	493 aa		13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	CCNE2	O96020	404 aa		13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	MUT	P22033	750 aa		13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	UBA1	P22314	1058 aa	Known RBP	13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	RPA1	P27694	616 aa		13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	ZNF445	P59923	1031 aa		13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	OLFML2B	Q68BL8	750 aa		13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	HAUS3	Q68CZ6	603 aa		13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	TAPT1	Q6NXT6	567 aa		13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	KCNK18	Q7Z418	384 aa		13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	FBXO16	Q8IX29	292 aa	Predicted RBP	13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	RDM1	Q8NG50	284 aa		13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	DHX58	Q96C10	678 aa		13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	APBA2	Q99767	749 aa		13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	TINF2	Q9BSI4	451 aa		13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	PANK2	Q9BZ23	570 aa		13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	ARHGAP39	Q9C0H5	1083 aa		13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	CRISPLD2	Q9H0B8	497 aa		13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	CUEDC2	Q9H467	287 aa		13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	BCAS3	Q9H6U6	928 aa		13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	VTA1	Q9NP79	307 aa		13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	SAGE1	Q9NXZ1	904 aa		13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	SLC5A4	Q9NY91	659 aa		13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	PKD2L1	Q9P0L9	805 aa		13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	CCDC39	Q9UFE4	941 aa		13.64	□□□□□ -0.23
MATR3-231	ENST00000502394	POTEB3	A0JP26	581 aa		13.63	□□□□□ -0.23
MATR3-231	ENST00000502394	FOXN1	O15353	648 aa		13.63	□□□□□ -0.23
MATR3-231	ENST00000502394	TRPA1	O75762	1119 aa		13.63	□□□□□ -0.23
MATR3-231	ENST00000502394	CCT6A	P40227	531 aa	Known RBP	13.63	□□□□□ -0.23
MATR3-231	ENST00000502394	RGS2	P41220	211 aa		13.63	□□□□□ -0.23
MATR3-231	ENST00000502394	PSMC4	P43686	418 aa		13.63	□□□□□ -0.23
MATR3-231	ENST00000502394	FCGRT	P55899	365 aa		13.63	□□□□□ -0.23
MATR3-231	ENST00000502394	KRT76	Q01546	638 aa		13.63	□□□□□ -0.23
MATR3-231	ENST00000502394	SP3	Q02447	781 aa		13.63	□□□□□ -0.23
MATR3-231	ENST00000502394	CAMK4	Q16566	473 aa		13.63	□□□□□ -0.23
MATR3-231	ENST00000502394	RRAGB	Q5VZM2	374 aa		13.63	□□□□□ -0.23
MATR3-231	ENST00000502394	KCNV1	Q6PIU1	500 aa		13.63	□□□□□ -0.23
MATR3-231	ENST00000502394	POTEB	Q6S5H4	581 aa		13.63	□□□□□ -0.23
MATR3-231	ENST00000502394	SEPT14	Q6ZU15	432 aa		13.63	□□□□□ -0.23
MATR3-231	ENST00000502394	CATSPER3	Q86XQ3	398 aa		13.63	□□□□□ -0.23
MATR3-231	ENST00000502394	KCTD17	Q8N5Z5	321 aa		13.63	□□□□□ -0.23
MATR3-231	ENST00000502394	CNNM3	Q8NE01	707 aa		13.63	□□□□□ -0.23
MATR3-231	ENST00000502394	ERMN	Q8TAM6	284 aa		13.63	□□□□□ -0.23
MATR3-231	ENST00000502394	NEK9	Q8TD19	979 aa		13.63	□□□□□ -0.23
MATR3-231	ENST00000502394	CALML4	Q96GE6	196 aa		13.63	□□□□□ -0.23
MATR3-231	ENST00000502394	FUCA2	Q9BTY2	467 aa		13.63	□□□□□ -0.23
MATR3-231	ENST00000502394	NT5C3A	Q9H0P0	336 aa		13.63	□□□□□ -0.23
MATR3-231	ENST00000502394	GZF1	Q9H116	711 aa	Predicted RBP	13.63	□□□□□ -0.23

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