RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 SOX1O00570 391 aaPredicted RBP7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 NRDCO43847 1150 aa7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 FBXO24O75426 580 aa7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 IL1R1P14778 569 aa7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 CDC25BP30305 580 aa7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 CD68P34810 354 aaPredicted RBP7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 EPS15P42566 896 aa7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 RFX5P48382 616 aaPredicted RBP7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 NEK2P51955 445 aa7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 RPS26P62854 115 aaKnown RBP7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 CHRNDQ07001 517 aa7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 RAPGEF1Q13905 1077 aa7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 LRRC41Q15345 812 aa7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 PPP2R5EQ16537 467 aa7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 STRIP1Q5VSL9 837 aa7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 TXNDC11Q6PKC3 985 aa7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 LMBR1LQ6UX01 489 aa7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 AGMOQ6ZNB7 445 aa7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 C14orf80Q86SX3 495 aa7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 REXO1Q8N1G1 1221 aaKnown RBP7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 C19orf47Q8N9M1 422 aaKnown RBP7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 JARID2Q92833 1246 aaPredicted RBP7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 ZC3H12CQ9C0D7 883 aaKnown RBP7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 C9orf78Q9NZ63 289 aaPredicted RBP7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 ZIM2Q9NZV7 527 aa7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 ANAPC4Q9UJX5 808 aa7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 HDAC5Q9UQL6 1122 aa7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 CNTNAP1P78357 1384 aa7.08□□□□□ -1.28
TMEM39A-212ENST00000497993 FAM205AQ6ZU69 1335 aa7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 MROH5Q6ZUA9 1318 aa7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 TM4SF5O14894 197 aa7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 TLR3O15455 904 aaKnown RBP7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 ESRRAP11474 423 aaPredicted RBP7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 TRIM27P14373 513 aa7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 SELPP16109 830 aa7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 CD53P19397 219 aa7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 GMPSP49915 693 aaPredicted RBP7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 RAB27AP51159 221 aa7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 HNRNPUQ00839 825 aaKnown RBP eCLIP7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 PCDH1Q08174 1060 aa7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 C19orf57Q0VDD7 668 aa7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 SUZ12Q15022 739 aaKnown RBP7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 CCDC57Q2TAC2 916 aa7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 TTBK2Q6IQ55 1244 aa7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 SLC4A10Q6U841 1118 aa7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 ATF7IPQ6VMQ6 1270 aa7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 KRBA2Q6ZNG9 492 aa7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 NECAB2Q7Z6G3 386 aa7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 RNF180Q86T96 592 aa7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 TRIM42Q8IWZ5 723 aa7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 GPATCH11Q8N954 259 aa7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 RBBP8NLQ8NC74 664 aaPredicted RBP7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 GALNT11Q8NCW6 608 aa7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 SVIPQ8NHG7 77 aa7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 TTC8Q8TAM2 541 aa7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 RIN3Q8TB24 985 aa7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 ZBED3Q96IU2 234 aaPredicted RBP7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 HHIPL1Q96JK4 782 aa7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 ZNF512BQ96KM6 892 aaPredicted RBP7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 MPHOSPH8Q99549 860 aa7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 MRPL18Q9H0U6 180 aaKnown RBP7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 TNKS2Q9H2K2 1166 aa7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 ZNF576Q9H609 170 aa7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 BICC1Q9H694 974 aaKnown RBP7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 DBNDD1Q9H9R9 158 aa7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 FBXO9Q9UK97 447 aaPredicted RBP7.07□□□□□ -1.28
TMEM39A-212ENST00000497993 RASSF10A6NK89 507 aa7.06□□□□□ -1.28
TMEM39A-212ENST00000497993 IPO8O15397 1037 aaKnown RBP7.06□□□□□ -1.28
TMEM39A-212ENST00000497993 AKAP10O43572 662 aa7.06□□□□□ -1.28
TMEM39A-212ENST00000497993 CIAO1O76071 339 aa7.06□□□□□ -1.28
TMEM39A-212ENST00000497993 FGAP02671 866 aa7.06□□□□□ -1.28
TMEM39A-212ENST00000497993 TFE3P19532 575 aaPredicted RBP7.06□□□□□ -1.28
TMEM39A-212ENST00000497993 FGFR2P21802 821 aa7.06□□□□□ -1.28
TMEM39A-212ENST00000497993 PABPC4Q13310 644 aaKnown RBP eCLIP7.06□□□□□ -1.28
TMEM39A-212ENST00000497993 MPP2Q14168 576 aa7.06□□□□□ -1.28
TMEM39A-212ENST00000497993 PLA2G4EQ3MJ16 856 aa7.06□□□□□ -1.28
TMEM39A-212ENST00000497993 DACT2Q5SW24 774 aa7.06□□□□□ -1.28
TMEM39A-212ENST00000497993 EEPD1Q7L9B9 569 aa7.06□□□□□ -1.28
TMEM39A-212ENST00000497993 PCGF5Q86SE9 256 aa7.06□□□□□ -1.28
TMEM39A-212ENST00000497993 TXNRD3Q86VQ6 643 aa7.06□□□□□ -1.28
TMEM39A-212ENST00000497993 LSRQ86X29 649 aaPredicted RBP7.06□□□□□ -1.28
TMEM39A-212ENST00000497993 FAM178BQ8IXR5 827 aa7.06□□□□□ -1.28
TMEM39A-212ENST00000497993 TMEM130Q8N3G9 435 aa7.06□□□□□ -1.28
TMEM39A-212ENST00000497993 PAF1Q8N7H5 531 aa7.06□□□□□ -1.28
TMEM39A-212ENST00000497993 SLC7A3Q8WY07 619 aa7.06□□□□□ -1.28
TMEM39A-212ENST00000497993 KLHDC7BQ96G42 594 aa7.06□□□□□ -1.28
TMEM39A-212ENST00000497993 NOB1Q9ULX3 412 aaKnown RBP7.06□□□□□ -1.28
TMEM39A-212ENST00000497993 AK9Q5TCS8 1911 aa7.05□□□□□ -1.28
TMEM39A-212ENST00000497993 PDS5AQ29RF7 1337 aaKnown RBP7.05□□□□□ -1.28
TMEM39A-212ENST00000497993 WTIPA6NIX2 430 aaPredicted RBP7.05□□□□□ -1.28
TMEM39A-212ENST00000497993 C1QTNF9BB2RNN3 333 aa7.05□□□□□ -1.28
TMEM39A-212ENST00000497993 BCAR3O75815 825 aa7.05□□□□□ -1.28
TMEM39A-212ENST00000497993 RAD17O75943 681 aa7.05□□□□□ -1.28
TMEM39A-212ENST00000497993 B3GALT4O96024 378 aa7.05□□□□□ -1.28
TMEM39A-212ENST00000497993 ZNF423Q2M1K9 1284 aa7.05□□□□□ -1.28
TMEM39A-212ENST00000497993 LDHAL6AQ6ZMR3 332 aa7.05□□□□□ -1.28
TMEM39A-212ENST00000497993 CD163Q86VB7 1156 aa7.05□□□□□ -1.28
TMEM39A-212ENST00000497993 PASD1Q8IV76 773 aa7.05□□□□□ -1.28
TMEM39A-212ENST00000497993 AMOTL1Q8IY63 956 aa7.05□□□□□ -1.28
TMEM39A-212ENST00000497993 CNTROBQ8N137 903 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms