RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	NYAP2	Q9P242	653 aa		6.58	□□□□□ -1.36
UBE3C-208	ENST00000497368	ATG2A	Q2TAZ0	1938 aa		6.58	□□□□□ -1.36
UBE3C-208	ENST00000497368	DOCK5	Q9H7D0	1870 aa		6.58	□□□□□ -1.36
UBE3C-208	ENST00000497368	SI	P14410	1827 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	XIRP2	A4UGR9	3374 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	SYNRG	Q9UMZ2	1314 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	ADARB2-AS1	A8MUL3	147 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	MINDY4B	A8MYZ0	360 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368		F5H6K3	240 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	DNM1L	O00429	736 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	OPLAH	O14841	1288 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	SEPT4	O43236	478 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	SNAI1	O95863	264 aa	Predicted RBP	6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	NFKB1	P19838	968 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	MX1	P20591	662 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	ADH7	P40394	386 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	ARSD	P51689	593 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	EPHB4	P54760	987 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	RTP1	P59025	263 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	CCNA1	P78396	465 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	KLRC3	Q07444	240 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	LRRC41	Q15345	812 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	TRIM60	Q495X7	471 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	FAM26D	Q5JW98	314 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	C9orf50	Q5SZB4	431 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	TMEM63B	Q5T3F8	832 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	NCAPG2	Q86XI2	1143 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	TREML1	Q86YW5	311 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	TBC1D10C	Q8IV04	446 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	MB21D1	Q8N884	522 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	MKL1	Q969V6	931 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	FAM227B	Q96M60	508 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	KANSL2	Q9H9L4	492 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	SLC38A10	Q9HBR0	1119 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	MTMR4	Q9NYA4	1195 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	NR2E3	Q9Y5X4	410 aa		6.57	□□□□□ -1.36
UBE3C-208	ENST00000497368	CARNS1	A5YM72	827 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	TRIM43B	A6NCK2	446 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	ATP2A1	O14983	1001 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	GLRX3	O76003	335 aa	Known RBP	6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	FGR	P09769	529 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	EPB42	P16452	691 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	ALAS2	P22557	587 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	COL8A1	P27658	744 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	SCNN1A	P37088	669 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	PDE1A	P54750	535 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	ATP2B2	Q01814	1243 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	PPARA	Q07869	468 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	HDAC1	Q13547	482 aa	Predicted RBP	6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	CCIN	Q13939	588 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	LRIT3	Q3SXY7	679 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	MFSD14C	Q5VZR4	134 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	ZSCAN25	Q6NSZ9	544 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	C16orf46	Q6P387	395 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	KRT25	Q7Z3Z0	450 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	ETFBKMT	Q8IXQ9	262 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	SMC5	Q8IY18	1101 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	TDH	Q8IZJ6	230 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	GMCL1P1	Q8NEA9	526 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	KLHDC9	Q8NEP7	349 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	COL26A1	Q96A83	441 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	TRIM43	Q96BQ3	446 aa	Predicted RBP	6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	VWCE	Q96DN2	955 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	GUCD1	Q96NT3	240 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	PNMA5	Q96PV4	448 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	MMP19	Q99542	508 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	SLF1	Q9BQI6	1058 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	TINF2	Q9BSI4	451 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	SENP6	Q9GZR1	1112 aa	Predicted RBP	6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	MROH8	Q9H579	483 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	HOXC10	Q9NYD6	342 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	STARD13	Q9Y3M8	1113 aa		6.56	□□□□□ -1.36
UBE3C-208	ENST00000497368	CUL9	Q8IWT3	2517 aa		6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	ZMYM6	O95789	1325 aa		6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	NEDD4	P46934	1319 aa		6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	PATL2	C9JE40	543 aa	Known RBP	6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	TNFRSF10B	O14763	440 aa		6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	GNB5	O14775	395 aa		6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	STRN	O43815	780 aa		6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	SLC25A27	O95847	323 aa		6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	PGK1	P00558	417 aa		6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	IGHD	P01880	384 aa		6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	ZFY	P08048	801 aa	Predicted RBP	6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	STAT3	P40763	770 aa		6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	TDO2	P48775	406 aa		6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	SNAP25	P60880	206 aa		6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	NMI	Q13287	307 aa	Predicted RBP	6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	PLS1	Q14651	629 aa		6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	MUM1L1	Q5H9M0	696 aa		6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	SNRNP48	Q6IEG0	339 aa	Known RBP	6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	RCSD1	Q6JBY9	416 aa		6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	MAMDC4	Q6UXC1	1216 aa		6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	SLC39A5	Q6ZMH5	540 aa		6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	C8orf86	Q6ZUL3	223 aa		6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	DPP9	Q86TI2	863 aa		6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	RGL4	Q8IZJ4	473 aa		6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	FAM133A	Q8N9E0	248 aa		6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	ARID3A	Q99856	593 aa		6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	FSD1	Q9BTV5	496 aa		6.55	□□□□□ -1.36

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