RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 TOB2Q14106 344 aaPredicted RBP17.95■□□□□ 0.46
HDAC4-213ENST00000496347 HIC1Q14526 733 aa17.95■□□□□ 0.46
HDAC4-213ENST00000496347 CNKSR3Q6P9H4 555 aa17.95■□□□□ 0.46
HDAC4-213ENST00000496347 TRAF7Q6Q0C0 670 aa17.95■□□□□ 0.46
HDAC4-213ENST00000496347 NIPA1Q7RTP0 329 aa17.95■□□□□ 0.46
HDAC4-213ENST00000496347 PHOSPHO2Q8TCD6 241 aa17.95■□□□□ 0.46
HDAC4-213ENST00000496347 MYLIPQ8WY64 445 aa17.95■□□□□ 0.46
HDAC4-213ENST00000496347 WNT8BQ93098 351 aa17.95■□□□□ 0.46
HDAC4-213ENST00000496347 C6orf50Q9HD87 102 aa17.95■□□□□ 0.46
HDAC4-213ENST00000496347 ERAP1Q9NZ08 941 aa17.95■□□□□ 0.46
HDAC4-213ENST00000496347 VCANP13611 3396 aa17.95■□□□□ 0.46
HDAC4-213ENST00000496347 NRCAMQ92823 1304 aa17.95■□□□□ 0.46
HDAC4-213ENST00000496347 NBNO60934 754 aa17.94■□□□□ 0.46
HDAC4-213ENST00000496347 EFCAB14O75071 495 aa17.94■□□□□ 0.46
HDAC4-213ENST00000496347 GNA11P29992 359 aa17.94■□□□□ 0.46
HDAC4-213ENST00000496347 PDIA3P30101 505 aaKnown RBP17.94■□□□□ 0.46
HDAC4-213ENST00000496347 ARHGAP4P98171 946 aa17.94■□□□□ 0.46
HDAC4-213ENST00000496347 ZNF200P98182 395 aaPredicted RBP17.94■□□□□ 0.46
HDAC4-213ENST00000496347 GRIN2CQ14957 1233 aa17.94■□□□□ 0.46
HDAC4-213ENST00000496347 NTRK3Q16288 839 aa17.94■□□□□ 0.46
HDAC4-213ENST00000496347 PKN1Q16512 942 aa17.94■□□□□ 0.46
HDAC4-213ENST00000496347 UTP14CQ5TAP6 766 aaKnown RBP17.94■□□□□ 0.46
HDAC4-213ENST00000496347 TRIM22Q8IYM9 498 aa17.94■□□□□ 0.46
HDAC4-213ENST00000496347 MAFAQ8NHW3 353 aaPredicted RBP17.94■□□□□ 0.46
HDAC4-213ENST00000496347 BICD2Q8TD16 824 aa17.94■□□□□ 0.46
HDAC4-213ENST00000496347 LMBR1Q8WVP7 490 aa17.94■□□□□ 0.46
HDAC4-213ENST00000496347 SEPT1Q8WYJ6 367 aa17.94■□□□□ 0.46
HDAC4-213ENST00000496347 PHKBQ93100 1093 aa17.94■□□□□ 0.46
HDAC4-213ENST00000496347 PGBD1Q96JS3 809 aa17.94■□□□□ 0.46
HDAC4-213ENST00000496347 SDF4Q9BRK5 362 aa17.94■□□□□ 0.46
HDAC4-213ENST00000496347 PKD2L1Q9P0L9 805 aa17.94■□□□□ 0.46
HDAC4-213ENST00000496347 YBX2Q9Y2T7 364 aaKnown RBP17.94■□□□□ 0.46
HDAC4-213ENST00000496347 SIP14410 1827 aa17.93■□□□□ 0.46
HDAC4-213ENST00000496347 EIF5BO60841 1220 aaKnown RBP17.93■□□□□ 0.46
HDAC4-213ENST00000496347 THPOP40225 353 aa17.93■□□□□ 0.46
HDAC4-213ENST00000496347 KCNJ6P48051 423 aa17.93■□□□□ 0.46
HDAC4-213ENST00000496347 SETQ01105 290 aaPredicted RBP17.93■□□□□ 0.46
HDAC4-213ENST00000496347 GPNMBQ14956 572 aa17.93■□□□□ 0.46
HDAC4-213ENST00000496347 ZNF618Q5T7W0 954 aa17.93■□□□□ 0.46
HDAC4-213ENST00000496347 SLC17A8Q8NDX2 589 aa17.93■□□□□ 0.46
HDAC4-213ENST00000496347 CRYGNQ8WXF5 182 aa17.93■□□□□ 0.46
HDAC4-213ENST00000496347 UPF3BQ9BZI7 483 aaKnown RBP17.93■□□□□ 0.46
HDAC4-213ENST00000496347 RNPEPQ9H4A4 650 aa17.93■□□□□ 0.46
HDAC4-213ENST00000496347 SLC28A3Q9HAS3 691 aa17.93■□□□□ 0.46
HDAC4-213ENST00000496347 TMEM260Q9NX78 707 aa17.93■□□□□ 0.46
HDAC4-213ENST00000496347 SLC9A2Q9UBY0 812 aa17.93■□□□□ 0.46
HDAC4-213ENST00000496347 TELO2Q9Y4R8 837 aa17.93■□□□□ 0.46
HDAC4-213ENST00000496347 ABHD14A-ACY1A0A1B0GW23 586 aa17.92■□□□□ 0.46
HDAC4-213ENST00000496347 MEIS1O00470 390 aa17.92■□□□□ 0.46
HDAC4-213ENST00000496347 TREHO43280 583 aa17.92■□□□□ 0.46
HDAC4-213ENST00000496347 CYP3A4P08684 503 aa17.92■□□□□ 0.46
HDAC4-213ENST00000496347 ANAPC15P60006 121 aa17.92■□□□□ 0.46
HDAC4-213ENST00000496347 WDR5P61964 334 aaKnown RBP17.92■□□□□ 0.46
HDAC4-213ENST00000496347 ADAM17P78536 824 aa17.92■□□□□ 0.46
HDAC4-213ENST00000496347 PPFIA1Q13136 1202 aa17.92■□□□□ 0.46
HDAC4-213ENST00000496347 MBTPS1Q14703 1052 aa17.92■□□□□ 0.46
HDAC4-213ENST00000496347 PPP2R2DQ66LE6 453 aa17.92■□□□□ 0.46
HDAC4-213ENST00000496347 TAF2Q6P1X5 1199 aa17.92■□□□□ 0.46
HDAC4-213ENST00000496347 FAM177A1Q8N128 213 aaPredicted RBP17.92■□□□□ 0.46
HDAC4-213ENST00000496347 CYP2W1Q8TAV3 490 aa17.92■□□□□ 0.46
HDAC4-213ENST00000496347 GLG1Q92896 1179 aa17.92■□□□□ 0.46
HDAC4-213ENST00000496347 ZNF274Q96GC6 653 aaPredicted RBP17.92■□□□□ 0.46
HDAC4-213ENST00000496347 SLC26A6Q9BXS9 759 aa17.92■□□□□ 0.46
HDAC4-213ENST00000496347 NKX2-4Q9H2Z4 354 aa17.92■□□□□ 0.46
HDAC4-213ENST00000496347 SMARCAD1Q9H4L7 1026 aa17.92■□□□□ 0.46
HDAC4-213ENST00000496347 NCOA5Q9HCD5 579 aaKnown RBP17.92■□□□□ 0.46
HDAC4-213ENST00000496347 AGO4Q9HCK5 861 aaKnown RBP17.92■□□□□ 0.46
HDAC4-213ENST00000496347 SH3GLB2Q9NR46 395 aa17.92■□□□□ 0.46
HDAC4-213ENST00000496347 GSTTP1A0A1W2PQM5 241 aa17.91■□□□□ 0.46
HDAC4-213ENST00000496347 RSPH10B2B2RC85 870 aa17.91■□□□□ 0.46
HDAC4-213ENST00000496347 CPLX1O14810 134 aa17.91■□□□□ 0.46
HDAC4-213ENST00000496347 LGR5O75473 907 aa17.91■□□□□ 0.46
HDAC4-213ENST00000496347 RPLP2P05387 115 aaKnown RBP17.91■□□□□ 0.46
HDAC4-213ENST00000496347 RSPH10BP0C881 870 aa17.91■□□□□ 0.46
HDAC4-213ENST00000496347 RABGGTBP53611 331 aa17.91■□□□□ 0.46
HDAC4-213ENST00000496347 CCT2P78371 535 aaKnown RBP17.91■□□□□ 0.46
HDAC4-213ENST00000496347 JAKMIP3Q5VZ66 844 aa17.91■□□□□ 0.46
HDAC4-213ENST00000496347 HERC6Q8IVU3 1022 aa17.91■□□□□ 0.46
HDAC4-213ENST00000496347 GAS2L1Q99501 681 aaPredicted RBP17.91■□□□□ 0.46
HDAC4-213ENST00000496347 AZI2Q9H6S1 392 aa17.91■□□□□ 0.46
HDAC4-213ENST00000496347 SETD4Q9NVD3 440 aa17.91■□□□□ 0.46
HDAC4-213ENST00000496347 MYH9P35579 1960 aaKnown RBP17.91■□□□□ 0.46
HDAC4-213ENST00000496347 ZNF76P36508 570 aa17.9■□□□□ 0.46
HDAC4-213ENST00000496347 ACTR2P61160 394 aa17.9■□□□□ 0.46
HDAC4-213ENST00000496347 ITGB3BPQ13352 177 aaPredicted RBP17.9■□□□□ 0.46
HDAC4-213ENST00000496347 CPLX2Q6PUV4 134 aaKnown RBP17.9■□□□□ 0.46
HDAC4-213ENST00000496347 RPAINQ86UA6 219 aa17.9■□□□□ 0.46
HDAC4-213ENST00000496347 PDRG1Q9NUG6 133 aa17.9■□□□□ 0.46
HDAC4-213ENST00000496347 TUBE1Q9UJT0 475 aa17.9■□□□□ 0.46
HDAC4-213ENST00000496347 WDR81Q562E7 1941 aa17.9■□□□□ 0.46
HDAC4-213ENST00000496347 TTC28Q96AY4 2481 aa17.9■□□□□ 0.46
HDAC4-213ENST00000496347 COL4A4P53420 1690 aaPredicted RBP17.9■□□□□ 0.46
HDAC4-213ENST00000496347 REV3LO60673 3130 aa17.89■□□□□ 0.45
HDAC4-213ENST00000496347 IGLV3-22A0A075B6J6 115 aa17.89■□□□□ 0.45
HDAC4-213ENST00000496347 MBLAC1A4D2B0 266 aaPredicted RBP17.89■□□□□ 0.45
HDAC4-213ENST00000496347 KIF28PB7ZC32 967 aa17.89■□□□□ 0.45
HDAC4-213ENST00000496347 FAM86B1E9PN63 330 aa17.89■□□□□ 0.45
HDAC4-213ENST00000496347 FAM86B2P0C5J1 330 aa17.89■□□□□ 0.45
HDAC4-213ENST00000496347 ARP10275 920 aa17.89■□□□□ 0.45
HDAC4-213ENST00000496347 MARK3P27448 753 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms