RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 POLR2BP30876 1174 aaKnown RBP5.34□□□□□ -1.55
VPS52-222ENST00000495981 NF2P35240 595 aa5.34□□□□□ -1.55
VPS52-222ENST00000495981 PSMC4P43686 418 aa5.34□□□□□ -1.55
VPS52-222ENST00000495981 GSTM4Q03013 218 aa5.34□□□□□ -1.55
VPS52-222ENST00000495981 PRKCZQ05513 592 aa5.34□□□□□ -1.55
VPS52-222ENST00000495981 PABPC4Q13310 644 aaKnown RBP eCLIP5.34□□□□□ -1.553e-6■■■□□ 15.2
VPS52-222ENST00000495981 CCL15Q16663 113 aa5.34□□□□□ -1.55
VPS52-222ENST00000495981 YOD1Q5VVQ6 348 aaPredicted RBP5.34□□□□□ -1.55
VPS52-222ENST00000495981 KIAA1211LQ6NV74 962 aa5.34□□□□□ -1.55
VPS52-222ENST00000495981 C17orf99Q6UX52 265 aa5.34□□□□□ -1.55
VPS52-222ENST00000495981 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.34□□□□□ -1.55
VPS52-222ENST00000495981 TXNRD3Q86VQ6 643 aa5.34□□□□□ -1.55
VPS52-222ENST00000495981 DDX42Q86XP3 938 aaKnown RBP eCLIP5.34□□□□□ -1.55
VPS52-222ENST00000495981 FMNL3Q8IVF7 1028 aa5.34□□□□□ -1.55
VPS52-222ENST00000495981 MICALL1Q8N3F8 863 aa5.34□□□□□ -1.55
VPS52-222ENST00000495981 TSR2Q969E8 191 aaKnown RBP5.34□□□□□ -1.55
VPS52-222ENST00000495981 CLUHP3Q96NS8 147 aa5.34□□□□□ -1.55
VPS52-222ENST00000495981 DEFB118Q96PH6 123 aa5.34□□□□□ -1.55
VPS52-222ENST00000495981 NCOA5Q9HCD5 579 aaKnown RBP5.34□□□□□ -1.55
VPS52-222ENST00000495981 AVENQ9NQS1 362 aaPredicted RBP5.34□□□□□ -1.55
VPS52-222ENST00000495981 ARHGEF4Q9NR80 690 aa5.34□□□□□ -1.55
VPS52-222ENST00000495981 KRT82Q9NSB4 513 aa5.34□□□□□ -1.55
VPS52-222ENST00000495981 HOMER2Q9NSB8 354 aa5.34□□□□□ -1.55
VPS52-222ENST00000495981 ZNF214Q9UL59 606 aaPredicted RBP5.34□□□□□ -1.55
VPS52-222ENST00000495981 STARD13Q9Y3M8 1113 aa5.34□□□□□ -1.55
VPS52-222ENST00000495981 PCDHGC5Q9Y5F6 944 aa5.34□□□□□ -1.55
VPS52-222ENST00000495981 SLC12A7Q9Y666 1083 aa5.34□□□□□ -1.55
VPS52-222ENST00000495981 ZFHX4Q86UP3 3567 aa5.34□□□□□ -1.55
VPS52-222ENST00000495981 DOCK2Q92608 1830 aa5.34□□□□□ -1.55
VPS52-222ENST00000495981 MYO3BQ8WXR4 1341 aa5.33□□□□□ -1.56
VPS52-222ENST00000495981 FANCIQ9NVI1 1328 aa5.33□□□□□ -1.56
VPS52-222ENST00000495981 CCDC194A0A1B0GVG4 234 aa5.33□□□□□ -1.56
VPS52-222ENST00000495981 CHURC1-FNTBB4DL54 471 aa5.33□□□□□ -1.56
VPS52-222ENST00000495981 TFRCP02786 760 aaKnown RBP5.33□□□□□ -1.56
VPS52-222ENST00000495981 PLCG1P19174 1290 aa5.33□□□□□ -1.56
VPS52-222ENST00000495981 CDC25BP30305 580 aa5.33□□□□□ -1.56
VPS52-222ENST00000495981 L1CAMP32004 1257 aa5.33□□□□□ -1.56
VPS52-222ENST00000495981 RING1Q06587 406 aa5.33□□□□□ -1.56
VPS52-222ENST00000495981 DDX10Q13206 875 aaKnown RBP5.33□□□□□ -1.56
VPS52-222ENST00000495981 TAF7LQ5H9L4 462 aa5.33□□□□□ -1.56
VPS52-222ENST00000495981 OTUD7BQ6GQQ9 843 aa5.33□□□□□ -1.56
VPS52-222ENST00000495981 GDF6Q6KF10 455 aaPredicted RBP5.33□□□□□ -1.56
VPS52-222ENST00000495981 PSAPL1Q6NUJ1 521 aa5.33□□□□□ -1.56
VPS52-222ENST00000495981 TXNDC11Q6PKC3 985 aa5.33□□□□□ -1.56
VPS52-222ENST00000495981 G2E3Q7L622 706 aa5.33□□□□□ -1.56
VPS52-222ENST00000495981 PPFIBP1Q86W92 1011 aa5.33□□□□□ -1.56
VPS52-222ENST00000495981 ANKRD18AQ8IVF6 992 aa5.33□□□□□ -1.56
VPS52-222ENST00000495981 CERS5Q8N5B7 392 aa5.33□□□□□ -1.56
VPS52-222ENST00000495981 TTLL11Q8NHH1 800 aa5.33□□□□□ -1.56
VPS52-222ENST00000495981 ACSF2Q96CM8 615 aaPredicted RBP5.33□□□□□ -1.56
VPS52-222ENST00000495981 SGSM3Q96HU1 749 aa5.33□□□□□ -1.56
VPS52-222ENST00000495981 CDC5LQ99459 802 aaKnown RBP5.33□□□□□ -1.56
VPS52-222ENST00000495981 PLA2G12BQ9BX93 195 aa5.33□□□□□ -1.56
VPS52-222ENST00000495981 EPN3Q9H201 632 aa5.33□□□□□ -1.56
VPS52-222ENST00000495981 BSDC1Q9NW68 430 aaPredicted RBP5.33□□□□□ -1.56
VPS52-222ENST00000495981 GABBR1Q9UBS5 961 aa5.33□□□□□ -1.56
VPS52-222ENST00000495981 MINPP1Q9UNW1 487 aa5.33□□□□□ -1.56
VPS52-222ENST00000495981 MAP3K2Q9Y2U5 619 aa5.33□□□□□ -1.56
VPS52-222ENST00000495981 COL2A1P02458 1487 aaPredicted RBP5.32□□□□□ -1.56
VPS52-222ENST00000495981 PFASO15067 1338 aa5.32□□□□□ -1.56
VPS52-222ENST00000495981 ADGRA2Q96PE1 1338 aa5.32□□□□□ -1.56
VPS52-222ENST00000495981 USP34Q70CQ2 3546 aa5.32□□□□□ -1.56
VPS52-222ENST00000495981 A0A1W2PQU0 124 aa5.32□□□□□ -1.56
VPS52-222ENST00000495981 CLRN2A0PK11 232 aa5.32□□□□□ -1.56
VPS52-222ENST00000495981 PI4KAP2A4QPH2 592 aa5.32□□□□□ -1.56
VPS52-222ENST00000495981 DCDC2CA8MYV0 355 aa5.32□□□□□ -1.56
VPS52-222ENST00000495981 ELL2O00472 640 aaPredicted RBP5.32□□□□□ -1.56
VPS52-222ENST00000495981 BMP4P12644 408 aa5.32□□□□□ -1.56
VPS52-222ENST00000495981 SNRPBP14678 240 aaKnown RBP5.32□□□□□ -1.56
VPS52-222ENST00000495981 MAOBP27338 520 aa5.32□□□□□ -1.56
VPS52-222ENST00000495981 CCT4P50991 539 aaKnown RBP5.32□□□□□ -1.56
VPS52-222ENST00000495981 GNAI1P63096 354 aa5.32□□□□□ -1.56
VPS52-222ENST00000495981 EXOSC10Q01780 885 aaKnown RBP5.32□□□□□ -1.56
VPS52-222ENST00000495981 GAS6Q14393 721 aa5.32□□□□□ -1.56
VPS52-222ENST00000495981 CCDC184Q52MB2 194 aa5.32□□□□□ -1.56
VPS52-222ENST00000495981 ZC3H12AQ5D1E8 599 aaKnown RBP5.32□□□□□ -1.56
VPS52-222ENST00000495981 ZC3H12BQ5HYM0 836 aaKnown RBP5.32□□□□□ -1.56
VPS52-222ENST00000495981 FAM209AQ5JX71 171 aa5.32□□□□□ -1.56
VPS52-222ENST00000495981 C9orf50Q5SZB4 431 aa5.32□□□□□ -1.56
VPS52-222ENST00000495981 STRIP1Q5VSL9 837 aa5.32□□□□□ -1.56
VPS52-222ENST00000495981 DIEXFQ68CQ4 756 aaKnown RBP5.32□□□□□ -1.56
VPS52-222ENST00000495981 HDXQ7Z353 690 aa5.32□□□□□ -1.56
VPS52-222ENST00000495981 UBE3BQ7Z3V4 1068 aa5.32□□□□□ -1.56
VPS52-222ENST00000495981 LRRC47Q8N1G4 583 aaKnown RBP5.32□□□□□ -1.56
VPS52-222ENST00000495981 AFAP1L2Q8N4X5 818 aa5.32□□□□□ -1.56
VPS52-222ENST00000495981 UBR7Q8N806 425 aa5.32□□□□□ -1.56
VPS52-222ENST00000495981 ZNF513Q8N8E2 541 aaPredicted RBP5.32□□□□□ -1.56
VPS52-222ENST00000495981 PI4KAP1Q8N8J0 262 aa5.32□□□□□ -1.56
VPS52-222ENST00000495981 RAET1EQ8TD07 263 aa5.32□□□□□ -1.56
VPS52-222ENST00000495981 CHAC2Q8WUX2 184 aa5.32□□□□□ -1.56
VPS52-222ENST00000495981 LRFN3Q9BTN0 628 aa5.32□□□□□ -1.56
VPS52-222ENST00000495981 EPHX3Q9H6B9 360 aa5.32□□□□□ -1.56
VPS52-222ENST00000495981 CAAP1Q9H8G2 361 aa5.32□□□□□ -1.56
VPS52-222ENST00000495981 PAK6Q9NQU5 681 aaPredicted RBP5.32□□□□□ -1.56
VPS52-222ENST00000495981 PTPRFP10586 1907 aa5.32□□□□□ -1.56
VPS52-222ENST00000495981 ZNF804BA4D1E1 1349 aa5.31□□□□□ -1.56
VPS52-222ENST00000495981 IL16Q14005 1332 aa5.31□□□□□ -1.56
VPS52-222ENST00000495981 MYPNQ86TC9 1320 aa5.31□□□□□ -1.56
VPS52-222ENST00000495981 DDX58O95786 925 aaKnown RBP5.31□□□□□ -1.56
VPS52-222ENST00000495981 DLGAP3O95886 979 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms