RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 PCYT2Q99447 389 aa21.99■■□□□ 1.11
HDAC4-212ENST00000495497 NAP1L4Q99733 375 aaKnown RBP21.99■■□□□ 1.11
HDAC4-212ENST00000495497 KCNMB3Q9NPA1 279 aa21.99■■□□□ 1.11
HDAC4-212ENST00000495497 HAS3O00219 553 aa21.98■■□□□ 1.11
HDAC4-212ENST00000495497 CHMP2AO43633 222 aa21.98■■□□□ 1.11
HDAC4-212ENST00000495497 GAS7O60861 476 aa21.98■■□□□ 1.11
HDAC4-212ENST00000495497 PSMD10O75832 226 aa21.98■■□□□ 1.11
HDAC4-212ENST00000495497 F2P00734 622 aa21.98■■□□□ 1.11
HDAC4-212ENST00000495497 ZNF174Q15697 407 aa21.98■■□□□ 1.11
HDAC4-212ENST00000495497 KIAA0753Q2KHM9 967 aa21.98■■□□□ 1.11
HDAC4-212ENST00000495497 FAM47CQ5HY64 1035 aa21.98■■□□□ 1.11
HDAC4-212ENST00000495497 RIT2Q99578 217 aa21.98■■□□□ 1.11
HDAC4-212ENST00000495497 TEKT3Q9BXF9 490 aa21.98■■□□□ 1.11
HDAC4-212ENST00000495497 UNC45AQ9H3U1 944 aa21.98■■□□□ 1.11
HDAC4-212ENST00000495497 ALPK3Q96L96 1907 aa21.98■■□□□ 1.11
HDAC4-212ENST00000495497 H3BRB1 525 aa21.97■■□□□ 1.11
HDAC4-212ENST00000495497 ATG7O95352 703 aa21.97■■□□□ 1.11
HDAC4-212ENST00000495497 PDCP20941 246 aa21.97■■□□□ 1.11
HDAC4-212ENST00000495497 MCM7P33993 719 aa21.97■■□□□ 1.11
HDAC4-212ENST00000495497 TOB1P50616 345 aaPredicted RBP21.97■■□□□ 1.11
HDAC4-212ENST00000495497 TTC38Q5R3I4 469 aa21.97■■□□□ 1.11
HDAC4-212ENST00000495497 ABHD15Q6UXT9 468 aa21.97■■□□□ 1.11
HDAC4-212ENST00000495497 FERMT3Q86UX7 667 aa21.97■■□□□ 1.11
HDAC4-212ENST00000495497 TRPV6Q9H1D0 765 aa21.97■■□□□ 1.11
HDAC4-212ENST00000495497 TUT1Q9H6E5 874 aaKnown RBP21.97■■□□□ 1.11
HDAC4-212ENST00000495497 TNRC18O15417 2968 aaPredicted RBP21.97■■□□□ 1.11
HDAC4-212ENST00000495497 MARCH6O60337 910 aa21.96■■□□□ 1.11
HDAC4-212ENST00000495497 SYN1P17600 705 aa21.96■■□□□ 1.11
HDAC4-212ENST00000495497 MARK3P27448 753 aa21.96■■□□□ 1.11
HDAC4-212ENST00000495497 KRT76Q01546 638 aa21.96■■□□□ 1.11
HDAC4-212ENST00000495497 ZNF746Q6NUN9 644 aaPredicted RBP21.96■■□□□ 1.11
HDAC4-212ENST00000495497 ANKRD33Q7Z3H0 272 aa21.96■■□□□ 1.11
HDAC4-212ENST00000495497 SH3RF1Q7Z6J0 888 aa21.96■■□□□ 1.11
HDAC4-212ENST00000495497 FAM126BQ8IXS8 530 aa21.96■■□□□ 1.11
HDAC4-212ENST00000495497 GLG1Q92896 1179 aa21.96■■□□□ 1.11
HDAC4-212ENST00000495497 KATNAL1Q9BW62 490 aa21.96■■□□□ 1.11
HDAC4-212ENST00000495497 TMEM60Q9H2L4 133 aa21.96■■□□□ 1.11
HDAC4-212ENST00000495497 TRMT13Q9NUP7 481 aaKnown RBP21.96■■□□□ 1.11
HDAC4-212ENST00000495497 HDAC6Q9UBN7 1215 aa21.96■■□□□ 1.11
HDAC4-212ENST00000495497 ZMYND8Q9ULU4 1186 aaPredicted RBP21.96■■□□□ 1.11
HDAC4-212ENST00000495497 NOL7Q9UMY1 257 aaKnown RBP21.96■■□□□ 1.11
HDAC4-212ENST00000495497 B4GALT4O60513 344 aa21.95■■□□□ 1.1
HDAC4-212ENST00000495497 NEMFO60524 1076 aa21.95■■□□□ 1.1
HDAC4-212ENST00000495497 LGR5O75473 907 aa21.95■■□□□ 1.1
HDAC4-212ENST00000495497 SUPT20HL2P0C7V6 817 aa21.95■■□□□ 1.1
HDAC4-212ENST00000495497 FAAP100Q0VG06 881 aa21.95■■□□□ 1.1
HDAC4-212ENST00000495497 CALCRLQ16602 461 aa21.95■■□□□ 1.1
HDAC4-212ENST00000495497 SWSAP1Q6NVH7 229 aa21.95■■□□□ 1.1
HDAC4-212ENST00000495497 NFRKBQ6P4R8 1299 aa21.95■■□□□ 1.1
HDAC4-212ENST00000495497 CCDC60Q8IWA6 550 aaPredicted RBP21.95■■□□□ 1.1
HDAC4-212ENST00000495497 TOX2Q96NM4 488 aa21.95■■□□□ 1.1
HDAC4-212ENST00000495497 RNPEPQ9H4A4 650 aa21.95■■□□□ 1.1
HDAC4-212ENST00000495497 PRDM5Q9NQX1 630 aaPredicted RBP21.95■■□□□ 1.1
HDAC4-212ENST00000495497 TCEAL9Q9UHQ7 104 aa21.95■■□□□ 1.1
HDAC4-212ENST00000495497 SAMM50Q9Y512 469 aa21.95■■□□□ 1.1
HDAC4-212ENST00000495497 PCDHB6Q9Y5E3 794 aa21.95■■□□□ 1.1
HDAC4-212ENST00000495497 DCDC2CA8MYV0 355 aa21.94■■□□□ 1.1
HDAC4-212ENST00000495497 BACH1O14867 736 aa21.94■■□□□ 1.1
HDAC4-212ENST00000495497 TBX3O15119 743 aa21.94■■□□□ 1.1
HDAC4-212ENST00000495497 HIC1Q14526 733 aa21.94■■□□□ 1.1
HDAC4-212ENST00000495497 MIS18BP1Q6P0N0 1132 aa21.94■■□□□ 1.1
HDAC4-212ENST00000495497 B3GNT9Q6UX72 402 aa21.94■■□□□ 1.1
HDAC4-212ENST00000495497 C7orf31Q8N865 590 aa21.94■■□□□ 1.1
HDAC4-212ENST00000495497 FAM20AQ96MK3 541 aa21.94■■□□□ 1.1
HDAC4-212ENST00000495497 SMARCAD1Q9H4L7 1026 aa21.94■■□□□ 1.1
HDAC4-212ENST00000495497 AZI2Q9H6S1 392 aa21.94■■□□□ 1.1
HDAC4-212ENST00000495497 PDLIM7Q9NR12 457 aa21.94■■□□□ 1.1
HDAC4-212ENST00000495497 DISC1Q9NRI5 854 aa21.94■■□□□ 1.1
HDAC4-212ENST00000495497 VAV3Q9UKW4 847 aa21.94■■□□□ 1.1
HDAC4-212ENST00000495497 ZNF215Q9UL58 517 aaPredicted RBP21.94■■□□□ 1.1
HDAC4-212ENST00000495497 MTMR6Q9Y217 621 aa21.94■■□□□ 1.1
HDAC4-212ENST00000495497 SCN10AQ9Y5Y9 1956 aa21.94■■□□□ 1.1
HDAC4-212ENST00000495497 IGKV6D-21A0A0A0MT36 114 aa21.93■■□□□ 1.1
HDAC4-212ENST00000495497 TRIM43BA6NCK2 446 aa21.93■■□□□ 1.1
HDAC4-212ENST00000495497 STX6O43752 255 aa21.93■■□□□ 1.1
HDAC4-212ENST00000495497 BAG4O95429 457 aaKnown RBP21.93■■□□□ 1.1
HDAC4-212ENST00000495497 CD4P01730 458 aa21.93■■□□□ 1.1
HDAC4-212ENST00000495497 CLTBP09497 229 aa21.93■■□□□ 1.1
HDAC4-212ENST00000495497 SMIM10L2AP0DMW4 78 aa21.93■■□□□ 1.1
HDAC4-212ENST00000495497 SMIM10L2BP0DMW5 78 aa21.93■■□□□ 1.1
HDAC4-212ENST00000495497 TRAPPC10P48553 1259 aa21.93■■□□□ 1.1
HDAC4-212ENST00000495497 STAT5BP51692 787 aa21.93■■□□□ 1.1
HDAC4-212ENST00000495497 ZNF200P98182 395 aaPredicted RBP21.93■■□□□ 1.1
HDAC4-212ENST00000495497 MROH7Q68CQ1 1323 aa21.93■■□□□ 1.1
HDAC4-212ENST00000495497 GDF6Q6KF10 455 aaPredicted RBP21.93■■□□□ 1.1
HDAC4-212ENST00000495497 MIER3Q7Z3K6 550 aa21.93■■□□□ 1.1
HDAC4-212ENST00000495497 EMSYQ7Z589 1322 aa21.93■■□□□ 1.1
HDAC4-212ENST00000495497 SMAP1Q8IYB5 467 aaPredicted RBP21.93■■□□□ 1.1
HDAC4-212ENST00000495497 TRIM43Q96BQ3 446 aaPredicted RBP21.93■■□□□ 1.1
HDAC4-212ENST00000495497 MTMR9Q96QG7 549 aa21.93■■□□□ 1.1
HDAC4-212ENST00000495497 ZNF302Q9NR11 478 aa21.93■■□□□ 1.1
HDAC4-212ENST00000495497 PCDHA10Q9Y5I2 948 aa21.93■■□□□ 1.1
HDAC4-212ENST00000495497 NR2E3Q9Y5X4 410 aa21.93■■□□□ 1.1
HDAC4-212ENST00000495497 WDR64B1ANS9 1081 aa21.92■■□□□ 1.1
HDAC4-212ENST00000495497 H0YGN5 161 aa21.92■■□□□ 1.1
HDAC4-212ENST00000495497 EML1O00423 815 aa21.92■■□□□ 1.1
HDAC4-212ENST00000495497 TLR3O15455 904 aaKnown RBP21.92■■□□□ 1.1
HDAC4-212ENST00000495497 PSAPP07602 524 aa21.92■■□□□ 1.1
HDAC4-212ENST00000495497 TXKP42681 527 aa21.92■■□□□ 1.1
HDAC4-212ENST00000495497 PTPN11Q06124 597 aaPredicted RBP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms