RNA–Protein interactions for RNA: ENST00000495484.5

PCDH15-223, Transcript of protocadherin related 15, human

TSL 5 BASIC

Gene PCDH15, Length 1,896 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-223	ENST00000495484	SAMM50	Q9Y512	469 aa		10.34	□□□□□ -0.75
PCDH15-223	ENST00000495484	PCDHA10	Q9Y5I2	948 aa		10.34	□□□□□ -0.75
PCDH15-223	ENST00000495484	SYCE3	A1L190	88 aa		10.34	□□□□□ -0.75
PCDH15-223	ENST00000495484	DDX39A	O00148	427 aa	Known RBP	10.34	□□□□□ -0.75
PCDH15-223	ENST00000495484	EML1	O00423	815 aa		10.34	□□□□□ -0.75
PCDH15-223	ENST00000495484	SLITRK3	O94933	977 aa		10.34	□□□□□ -0.75
PCDH15-223	ENST00000495484	GNRH1	P01148	92 aa		10.34	□□□□□ -0.75
PCDH15-223	ENST00000495484	CCDC192	P0DO97	292 aa		10.34	□□□□□ -0.75
PCDH15-223	ENST00000495484	HSPA6	P17066	643 aa		10.34	□□□□□ -0.75
PCDH15-223	ENST00000495484	MDM2	Q00987	491 aa	Predicted RBP	10.34	□□□□□ -0.75
PCDH15-223	ENST00000495484	MAP2K1	Q02750	393 aa	Predicted RBP	10.34	□□□□□ -0.75
PCDH15-223	ENST00000495484	NAALADL2	Q58DX5	795 aa		10.34	□□□□□ -0.75
PCDH15-223	ENST00000495484	MIS18BP1	Q6P0N0	1132 aa		10.34	□□□□□ -0.75
PCDH15-223	ENST00000495484	LRSAM1	Q6UWE0	723 aa		10.34	□□□□□ -0.75
PCDH15-223	ENST00000495484	EEPD1	Q7L9B9	569 aa		10.34	□□□□□ -0.75
PCDH15-223	ENST00000495484	SH3RF1	Q7Z6J0	888 aa		10.34	□□□□□ -0.75
PCDH15-223	ENST00000495484	TRMT44	Q8IYL2	757 aa	Known RBP	10.34	□□□□□ -0.75
PCDH15-223	ENST00000495484	LARP4B	Q92615	738 aa	Known RBP	10.34	□□□□□ -0.75
PCDH15-223	ENST00000495484	PNMA5	Q96PV4	448 aa		10.34	□□□□□ -0.75
PCDH15-223	ENST00000495484	NACC1	Q96RE7	527 aa		10.34	□□□□□ -0.75
PCDH15-223	ENST00000495484	ZSWIM4	Q9H7M6	989 aa		10.34	□□□□□ -0.75
PCDH15-223	ENST00000495484	BMP2K	Q9NSY1	1161 aa	Predicted RBP	10.34	□□□□□ -0.75
PCDH15-223	ENST00000495484	DDX41	Q9UJV9	622 aa	Known RBP	10.34	□□□□□ -0.75
PCDH15-223	ENST00000495484	KIAA1024	Q9UPX6	916 aa		10.34	□□□□□ -0.75
PCDH15-223	ENST00000495484	RBM47	A0AV96	593 aa	Known RBP	10.33	□□□□□ -0.76
PCDH15-223	ENST00000495484	GTPBP6	O43824	516 aa	Predicted RBP	10.33	□□□□□ -0.76
PCDH15-223	ENST00000495484	MED24	O75448	989 aa		10.33	□□□□□ -0.76
PCDH15-223	ENST00000495484	PSAP	P07602	524 aa		10.33	□□□□□ -0.76
PCDH15-223	ENST00000495484	SPATA31C1	P0DKV0	1188 aa		10.33	□□□□□ -0.76
PCDH15-223	ENST00000495484	XRCC6	P12956	609 aa	Known RBP eCLIP	10.33	□□□□□ -0.76
PCDH15-223	ENST00000495484	QARS	P47897	775 aa	Known RBP	10.33	□□□□□ -0.76
PCDH15-223	ENST00000495484	CCDC62	Q6P9F0	684 aa		10.33	□□□□□ -0.76
PCDH15-223	ENST00000495484	METTL7B	Q6UX53	244 aa		10.33	□□□□□ -0.76
PCDH15-223	ENST00000495484	CYFIP1	Q7L576	1253 aa		10.33	□□□□□ -0.76
PCDH15-223	ENST00000495484	TPH2	Q8IWU9	490 aa		10.33	□□□□□ -0.76
PCDH15-223	ENST00000495484	CKAP2L	Q8IYA6	745 aa		10.33	□□□□□ -0.76
PCDH15-223	ENST00000495484	NPLOC4	Q8TAT6	608 aa		10.33	□□□□□ -0.76
PCDH15-223	ENST00000495484	RAD54L	Q92698	747 aa		10.33	□□□□□ -0.76
PCDH15-223	ENST00000495484	SMARCE1	Q969G3	411 aa		10.33	□□□□□ -0.76
PCDH15-223	ENST00000495484	PLIN2	Q99541	437 aa		10.33	□□□□□ -0.76
PCDH15-223	ENST00000495484	BEGAIN	Q9BUH8	593 aa		10.33	□□□□□ -0.76
PCDH15-223	ENST00000495484	MLXIP	Q9HAP2	919 aa		10.33	□□□□□ -0.76
PCDH15-223	ENST00000495484	KBTBD4	Q9NVX7	518 aa		10.33	□□□□□ -0.76
PCDH15-223	ENST00000495484	NRBP1	Q9UHY1	535 aa		10.33	□□□□□ -0.76
PCDH15-223	ENST00000495484	POTEB3	A0JP26	581 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	NKRF	O15226	690 aa	Known RBP eCLIP	10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	LYPLA2	O95372	231 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	CAVIN2	O95810	425 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	SNAI1	O95863	264 aa	Predicted RBP	10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	CCNE2	O96020	404 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	TXN	P10599	105 aa	Known RBP	10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	CYP2B6	P20813	491 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	UBA1	P22314	1058 aa	Known RBP	10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	AFM	P43652	599 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	PSMC5	P62195	406 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	HTRA3	P83110	453 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	ACVR2B	Q13705	512 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	CELF3	Q5SZQ8	465 aa	Known RBP	10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	IQSEC1	Q6DN90	963 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	POTEB	Q6S5H4	581 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	FBXO16	Q8IX29	292 aa	Predicted RBP	10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	DHX37	Q8IY37	1157 aa	Known RBP	10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	ATP6V0A1	Q93050	837 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	CCDC47	Q96A33	483 aa	Known RBP	10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	DYDC2	Q96IM9	177 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	TRIM47	Q96LD4	638 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	GSDMA	Q96QA5	445 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	GTPBP4	Q9BZE4	634 aa	Known RBP	10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	RGL1	Q9NZL6	768 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	TUBE1	Q9UJT0	475 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	GPR25	O00155	361 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	FARP2	O94887	1054 aa	Predicted RBP	10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	ATG7	O95352	703 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	GGPS1	O95749	300 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	C1QTNF8	P60827	252 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	ACTR2	P61160	394 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	SP2	Q02086	613 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	CYP4A11	Q02928	519 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	PNOC	Q13519	176 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	LAMC2	Q13753	1193 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	ECM1	Q16610	540 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	LY6K	Q17RY6	165 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	NT5DC1	Q5TFE4	455 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	TAPT1	Q6NXT6	567 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	C4orf19	Q8IY42	314 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	TRIML1	Q8N9V2	468 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	SPATA20	Q8TB22	786 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	SEPT1	Q8WYJ6	367 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	ERO1A	Q96HE7	468 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	LXN	Q9BS40	222 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	BLOC1S4	Q9NUP1	217 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	RMND1	Q9NWS8	449 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	PCDHA5	Q9Y5H7	936 aa		10.32	□□□□□ -0.76
PCDH15-223	ENST00000495484	POTEF	A5A3E0	1075 aa		10.31	□□□□□ -0.76
PCDH15-223	ENST00000495484	NOP56	O00567	594 aa	Known RBP	10.31	□□□□□ -0.76
PCDH15-223	ENST00000495484	EYA4	O95677	639 aa		10.31	□□□□□ -0.76
PCDH15-223	ENST00000495484	GH1	P01241	217 aa		10.31	□□□□□ -0.76
PCDH15-223	ENST00000495484	PLA2G4B	P0C869	781 aa		10.31	□□□□□ -0.76
PCDH15-223	ENST00000495484	DPYD	Q12882	1025 aa		10.31	□□□□□ -0.76
PCDH15-223	ENST00000495484	CTTN	Q14247	550 aa	Known RBP	10.31	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms