RNA–Protein interactions for RNA: ENST00000495082.5

SLC13A3-211, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 1,887 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-211ENST00000495082 NEDD9Q14511 834 aa12.91□□□□□ -0.34
SLC13A3-211ENST00000495082 ZRSR1Q15695 479 aaKnown RBP12.91□□□□□ -0.34
SLC13A3-211ENST00000495082 OLFML2BQ68BL8 750 aa12.91□□□□□ -0.34
SLC13A3-211ENST00000495082 MIER3Q7Z3K6 550 aa12.91□□□□□ -0.34
SLC13A3-211ENST00000495082 SMAP1Q8IYB5 467 aaPredicted RBP12.91□□□□□ -0.34
SLC13A3-211ENST00000495082 SCFD2Q8WU76 684 aa12.91□□□□□ -0.34
SLC13A3-211ENST00000495082 PAGE5Q96GU1 130 aa12.91□□□□□ -0.34
SLC13A3-211ENST00000495082 KATNBL1Q9H079 304 aa12.91□□□□□ -0.34
SLC13A3-211ENST00000495082 KBTBD4Q9NVX7 518 aa12.91□□□□□ -0.34
SLC13A3-211ENST00000495082 SAGE1Q9NXZ1 904 aa12.91□□□□□ -0.34
SLC13A3-211ENST00000495082 WDR64B1ANS9 1081 aa12.9□□□□□ -0.34
SLC13A3-211ENST00000495082 DDX39AO00148 427 aaKnown RBP12.9□□□□□ -0.34
SLC13A3-211ENST00000495082 SNAI1O95863 264 aaPredicted RBP12.9□□□□□ -0.34
SLC13A3-211ENST00000495082 CCNE2O96020 404 aa12.9□□□□□ -0.34
SLC13A3-211ENST00000495082 IGHA2P01877 340 aa12.9□□□□□ -0.34
SLC13A3-211ENST00000495082 MYL1P05976 194 aa12.9□□□□□ -0.34
SLC13A3-211ENST00000495082 XRCC5P13010 732 aaKnown RBP12.9□□□□□ -0.34
SLC13A3-211ENST00000495082 HSPA6P17066 643 aa12.9□□□□□ -0.34
SLC13A3-211ENST00000495082 PSMC4P43686 418 aa12.9□□□□□ -0.34
SLC13A3-211ENST00000495082 POSTNQ15063 836 aa12.9□□□□□ -0.34
SLC13A3-211ENST00000495082 ECM1Q16610 540 aa12.9□□□□□ -0.34
SLC13A3-211ENST00000495082 CCDC62Q6P9F0 684 aa12.9□□□□□ -0.34
SLC13A3-211ENST00000495082 EEPD1Q7L9B9 569 aa12.9□□□□□ -0.34
SLC13A3-211ENST00000495082 FBXO16Q8IX29 292 aaPredicted RBP12.9□□□□□ -0.34
SLC13A3-211ENST00000495082 CKAP2LQ8IYA6 745 aa12.9□□□□□ -0.34
SLC13A3-211ENST00000495082 LRRC15Q8TF66 581 aa12.9□□□□□ -0.34
SLC13A3-211ENST00000495082 TRIM47Q96LD4 638 aa12.9□□□□□ -0.34
SLC13A3-211ENST00000495082 BLOC1S4Q9NUP1 217 aa12.9□□□□□ -0.34
SLC13A3-211ENST00000495082 KIAA1468Q9P260 1216 aa12.9□□□□□ -0.34
SLC13A3-211ENST00000495082 SLC9A2Q9UBY0 812 aa12.9□□□□□ -0.34
SLC13A3-211ENST00000495082 DDX41Q9UJV9 622 aaKnown RBP12.9□□□□□ -0.34
SLC13A3-211ENST00000495082 PLXNA1Q9UIW2 1896 aa12.9□□□□□ -0.34
SLC13A3-211ENST00000495082 POTEB3A0JP26 581 aa12.89□□□□□ -0.35
SLC13A3-211ENST00000495082 SLITRK3O94933 977 aa12.89□□□□□ -0.35
SLC13A3-211ENST00000495082 XRCC6P12956 609 aaKnown RBP eCLIP12.89□□□□□ -0.35
SLC13A3-211ENST00000495082 TTLL4Q14679 1199 aa12.89□□□□□ -0.35
SLC13A3-211ENST00000495082 KIF22Q14807 665 aa12.89□□□□□ -0.35
SLC13A3-211ENST00000495082 TAPT1Q6NXT6 567 aa12.89□□□□□ -0.35
SLC13A3-211ENST00000495082 POTEBQ6S5H4 581 aa12.89□□□□□ -0.35
SLC13A3-211ENST00000495082 LARP4BQ92615 738 aaKnown RBP12.89□□□□□ -0.35
SLC13A3-211ENST00000495082 RAD54LQ92698 747 aa12.89□□□□□ -0.35
SLC13A3-211ENST00000495082 PLIN2Q99541 437 aa12.89□□□□□ -0.35
SLC13A3-211ENST00000495082 MTRQ99707 1265 aa12.89□□□□□ -0.35
SLC13A3-211ENST00000495082 ABHD16BQ9H3Z7 469 aa12.89□□□□□ -0.35
SLC13A3-211ENST00000495082 GRPEL1Q9HAV7 217 aa12.89□□□□□ -0.35
SLC13A3-211ENST00000495082 KIAA1024Q9UPX6 916 aa12.89□□□□□ -0.35
SLC13A3-211ENST00000495082 PCDHA10Q9Y5I2 948 aa12.89□□□□□ -0.35
SLC13A3-211ENST00000495082 FOXN1O15353 648 aa12.89□□□□□ -0.35
SLC13A3-211ENST00000495082 FARP2O94887 1054 aaPredicted RBP12.89□□□□□ -0.35
SLC13A3-211ENST00000495082 ARIH2O95376 493 aa12.89□□□□□ -0.35
SLC13A3-211ENST00000495082 P4HBP07237 508 aaKnown RBP12.89□□□□□ -0.35
SLC13A3-211ENST00000495082 NT5DC1Q5TFE4 455 aa12.89□□□□□ -0.35
SLC13A3-211ENST00000495082 LRSAM1Q6UWE0 723 aa12.89□□□□□ -0.35
SLC13A3-211ENST00000495082 METTL7BQ6UX53 244 aa12.89□□□□□ -0.35
SLC13A3-211ENST00000495082 KCNK18Q7Z418 384 aa12.89□□□□□ -0.35
SLC13A3-211ENST00000495082 SPATA20Q8TB22 786 aa12.89□□□□□ -0.35
SLC13A3-211ENST00000495082 DYDC2Q96IM9 177 aa12.89□□□□□ -0.35
SLC13A3-211ENST00000495082 FUCA2Q9BTY2 467 aa12.89□□□□□ -0.35
SLC13A3-211ENST00000495082 ARHGAP39Q9C0H5 1083 aa12.89□□□□□ -0.35
SLC13A3-211ENST00000495082 RGL1Q9NZL6 768 aa12.89□□□□□ -0.35
SLC13A3-211ENST00000495082 TUBE1Q9UJT0 475 aa12.89□□□□□ -0.35
SLC13A3-211ENST00000495082 KIAA1217Q5T5P2 1943 aa12.88□□□□□ -0.35
SLC13A3-211ENST00000495082 POTEFA5A3E0 1075 aa12.88□□□□□ -0.35
SLC13A3-211ENST00000495082 GTPBP6O43824 516 aaPredicted RBP12.88□□□□□ -0.35
SLC13A3-211ENST00000495082 ATG7O95352 703 aa12.88□□□□□ -0.35
SLC13A3-211ENST00000495082 LYPLA2O95372 231 aa12.88□□□□□ -0.35
SLC13A3-211ENST00000495082 C1QTNF8P60827 252 aa12.88□□□□□ -0.35
SLC13A3-211ENST00000495082 ACTR2P61160 394 aa12.88□□□□□ -0.35
SLC13A3-211ENST00000495082 AMPD3Q01432 767 aa12.88□□□□□ -0.35
SLC13A3-211ENST00000495082 CYP4A11Q02928 519 aa12.88□□□□□ -0.35
SLC13A3-211ENST00000495082 PNOCQ13519 176 aa12.88□□□□□ -0.35
SLC13A3-211ENST00000495082 POTEGQ6S5H5 508 aa12.88□□□□□ -0.35
SLC13A3-211ENST00000495082 CYFIP1Q7L576 1253 aa12.88□□□□□ -0.35
SLC13A3-211ENST00000495082 GRAMD1CQ8IYS0 662 aa12.88□□□□□ -0.35
SLC13A3-211ENST00000495082 BCAS3Q9H6U6 928 aa12.88□□□□□ -0.35
SLC13A3-211ENST00000495082 ZSWIM4Q9H7M6 989 aa12.88□□□□□ -0.35
SLC13A3-211ENST00000495082 DNM3Q9UQ16 869 aa12.88□□□□□ -0.35
SLC13A3-211ENST00000495082 SAMM50Q9Y512 469 aa12.88□□□□□ -0.35
SLC13A3-211ENST00000495082 GPR25O00155 361 aa12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 GGPS1O95749 300 aa12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 PSAPP07602 524 aa12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 CCDC192P0DO97 292 aa12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 TXNP10599 105 aaKnown RBP12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 CYP2B6P20813 491 aa12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 AFMP43652 599 aa12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 QARSP47897 775 aaKnown RBP12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 SARSP49591 514 aaKnown RBP12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 DPYDQ12882 1025 aa12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 ACVR2BQ13705 512 aa12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 CTTNQ14247 550 aaKnown RBP12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 LY6KQ17RY6 165 aa12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 CELF3Q5SZQ8 465 aaKnown RBP12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 MIS18BP1Q6P0N0 1132 aa12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 CNNM4Q6P4Q7 775 aa12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 ABHD15Q6UXT9 468 aa12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 SV2BQ7L1I2 683 aa12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 TPH2Q8IWU9 490 aa12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 NACC1Q96RE7 527 aa12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 LXNQ9BS40 222 aa12.87□□□□□ -0.35
SLC13A3-211ENST00000495082 LRRC27Q9C0I9 530 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms