RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-222ENST00000495071 KCNH2Q12809 1159 aa14.74□□□□□ -0.05
SUPT20H-222ENST00000495071 CCDC88AQ3V6T2 1871 aa14.74□□□□□ -0.05
SUPT20H-222ENST00000495071 FAM182BQ5T319 152 aa14.74□□□□□ -0.05
SUPT20H-222ENST00000495071 GOLPH3Q9H4A6 298 aa14.74□□□□□ -0.05
SUPT20H-222ENST00000495071 USP17L15C9J2P7 530 aa14.74□□□□□ -0.05
SUPT20H-222ENST00000495071 USP17L10C9JJH3 530 aa14.74□□□□□ -0.05
SUPT20H-222ENST00000495071 USP17L13C9JLJ4 530 aa14.74□□□□□ -0.05
SUPT20H-222ENST00000495071 USP17L11C9JVI0 530 aa14.74□□□□□ -0.05
SUPT20H-222ENST00000495071 USP17L18D6R9N7 530 aa14.74□□□□□ -0.05
SUPT20H-222ENST00000495071 USP17L22D6RA61 530 aa14.74□□□□□ -0.05
SUPT20H-222ENST00000495071 USP17L17D6RBQ6 530 aa14.74□□□□□ -0.05
SUPT20H-222ENST00000495071 USP17L19D6RCP7 530 aa14.74□□□□□ -0.05
SUPT20H-222ENST00000495071 USP17L20D6RJB6 530 aa14.74□□□□□ -0.05
SUPT20H-222ENST00000495071 TTLL1O95922 423 aa14.74□□□□□ -0.05
SUPT20H-222ENST00000495071 ACTN1P12814 892 aa14.74□□□□□ -0.05
SUPT20H-222ENST00000495071 GTF2IP78347 998 aa14.74□□□□□ -0.05
SUPT20H-222ENST00000495071 USP17L24Q0WX57 530 aa14.74□□□□□ -0.05
SUPT20H-222ENST00000495071 CEP85LQ5SZL2 805 aa14.74□□□□□ -0.05
SUPT20H-222ENST00000495071 PPP4R3AQ6IN85 833 aa14.74□□□□□ -0.05
SUPT20H-222ENST00000495071 USP17L6PQ6QN14 398 aa14.74□□□□□ -0.05
SUPT20H-222ENST00000495071 SYN2Q92777 582 aaPredicted RBP14.74□□□□□ -0.05
SUPT20H-222ENST00000495071 RHBDL3P58872 404 aa14.74□□□□□ -0.05
SUPT20H-222ENST00000495071 TRAPPC3LQ5T215 181 aa14.74□□□□□ -0.05
SUPT20H-222ENST00000495071 HAS1Q92839 578 aa14.74□□□□□ -0.05
SUPT20H-222ENST00000495071 BCCIPQ9P287 314 aaKnown RBP eCLIP14.74□□□□□ -0.05
SUPT20H-222ENST00000495071 A6NNZ2 444 aa14.73□□□□□ -0.05
SUPT20H-222ENST00000495071 STAT3P40763 770 aa14.73□□□□□ -0.05
SUPT20H-222ENST00000495071 GTF2A1P52655 376 aaPredicted RBP14.73□□□□□ -0.05
SUPT20H-222ENST00000495071 TUBB8Q3ZCM7 444 aa14.73□□□□□ -0.05
SUPT20H-222ENST00000495071 TRIM59Q8IWR1 403 aa14.73□□□□□ -0.05
SUPT20H-222ENST00000495071 CASKIN2Q8WXE0 1202 aa14.73□□□□□ -0.05
SUPT20H-222ENST00000495071 ARMCX3Q9UH62 379 aaPredicted RBP14.73□□□□□ -0.05
SUPT20H-222ENST00000495071 RREB1Q92766 1687 aa14.73□□□□□ -0.05
SUPT20H-222ENST00000495071 IRS2Q9Y4H2 1338 aa14.73□□□□□ -0.05
SUPT20H-222ENST00000495071 RIMBP2O15034 1052 aa14.73□□□□□ -0.05
SUPT20H-222ENST00000495071 HOXA7P31268 230 aaPredicted RBP14.73□□□□□ -0.05
SUPT20H-222ENST00000495071 GUCY1A3Q02108 690 aa14.73□□□□□ -0.05
SUPT20H-222ENST00000495071 PDE4CQ08493 712 aa14.73□□□□□ -0.05
SUPT20H-222ENST00000495071 ZNF543Q08ER8 600 aa14.73□□□□□ -0.05
SUPT20H-222ENST00000495071 ZCWPW2Q504Y3 356 aa14.73□□□□□ -0.05
SUPT20H-222ENST00000495071 RC3H1Q5TC82 1133 aaKnown RBP14.73□□□□□ -0.05
SUPT20H-222ENST00000495071 BARGINQ6ZT62 677 aa14.73□□□□□ -0.05
SUPT20H-222ENST00000495071 DNAAF5Q86Y56 855 aa14.73□□□□□ -0.05
SUPT20H-222ENST00000495071 HDAC9Q9UKV0 1011 aa14.73□□□□□ -0.05
SUPT20H-222ENST00000495071 RAD51CO43502 376 aa14.73□□□□□ -0.05
SUPT20H-222ENST00000495071 EPB41P11171 864 aaKnown RBP14.73□□□□□ -0.05
SUPT20H-222ENST00000495071 GCFC2P16383 781 aaKnown RBP14.73□□□□□ -0.05
SUPT20H-222ENST00000495071 NR1D1P20393 614 aa14.73□□□□□ -0.05
SUPT20H-222ENST00000495071 ATP2B4P23634 1241 aa14.73□□□□□ -0.05
SUPT20H-222ENST00000495071 IFI16Q16666 785 aaKnown RBP14.73□□□□□ -0.05
SUPT20H-222ENST00000495071 ODF2Q5BJF6 829 aa14.73□□□□□ -0.05
SUPT20H-222ENST00000495071 B4GALNT4Q76KP1 1039 aa14.73□□□□□ -0.05
SUPT20H-222ENST00000495071 GDF3Q9NR23 364 aa14.73□□□□□ -0.05
SUPT20H-222ENST00000495071 GRID2IPA4D2P6 1211 aa14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 POTEFA5A3E0 1075 aa14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 RBAK-RBAKDNI3L0D1 243 aa14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 TULP1O00294 542 aaPredicted RBP14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 MEIS1O00470 390 aa14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 POTEIP0CG38 1075 aa14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 IKQ13123 557 aaPredicted RBP14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 PABPC4Q13310 644 aaKnown RBP eCLIP14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 TRADDQ15628 312 aa14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 MEI1Q5TIA1 1274 aa14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 POTEGQ6S5H5 508 aa14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 POTEEQ6S8J3 1075 aa14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 VPS36Q86VN1 386 aa14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 OTUD6BQ8N6M0 293 aa14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 TBC1D22AQ8WUA7 517 aa14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 SCFD1Q8WVM8 642 aa14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 AP1M1Q9BXS5 423 aa14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 TNFRSF8P28908 595 aa14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 PTK2Q05397 1052 aa14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 ARHGAP27Q6ZUM4 889 aa14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 WHAMMQ8TF30 809 aa14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 RNPC3Q96LT9 517 aaKnown RBP14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 SERPINB13Q9UIV8 391 aa14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 GRIN2DO15399 1336 aa14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 FAM170AA1A519 330 aa14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 SLC9A1P19634 815 aa14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 CDC37Q16543 378 aaPredicted RBP14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 EXOC3L4Q17RC7 722 aa14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 RNF187Q5TA31 235 aaPredicted RBP14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 AMIGO3Q86WK7 504 aa14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 PROCA1Q8NCQ7 364 aaPredicted RBP14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 PLAAQ9Y263 795 aa14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 DAGLAQ9Y4D2 1042 aa14.72□□□□□ -0.05
SUPT20H-222ENST00000495071 ZNF233A6NK53 670 aa14.71□□□□□ -0.05
SUPT20H-222ENST00000495071 ZBTB5O15062 677 aa14.71□□□□□ -0.05
SUPT20H-222ENST00000495071 EDIL3O43854 480 aa14.71□□□□□ -0.05
SUPT20H-222ENST00000495071 XRCC5P13010 732 aaKnown RBP14.71□□□□□ -0.05
SUPT20H-222ENST00000495071 USP38Q8NB14 1042 aa14.71□□□□□ -0.05
SUPT20H-222ENST00000495071 PCDHGC5Q9Y5F6 944 aa14.71□□□□□ -0.05
SUPT20H-222ENST00000495071 PCDHA1Q9Y5I3 950 aa14.71□□□□□ -0.05
SUPT20H-222ENST00000495071 ROBO1Q9Y6N7 1651 aa14.71□□□□□ -0.05
SUPT20H-222ENST00000495071 RGL2O15211 777 aa14.71□□□□□ -0.05
SUPT20H-222ENST00000495071 PPP1R11O60927 126 aaPredicted RBP14.71□□□□□ -0.05
SUPT20H-222ENST00000495071 PRR16Q569H4 304 aa14.71□□□□□ -0.05
SUPT20H-222ENST00000495071 ICE2Q659A1 982 aa14.71□□□□□ -0.05
SUPT20H-222ENST00000495071 PPP1R18Q6NYC8 613 aa14.71□□□□□ -0.05
SUPT20H-222ENST00000495071 CYP11B2P19099 503 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms