RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 HAND2P61296 217 aa8.88□□□□□ -0.99
RPGR-210ENST00000494841 POU4F3Q15319 338 aa8.88□□□□□ -0.99
RPGR-210ENST00000494841 TAF1CQ15572 869 aaPredicted RBP8.88□□□□□ -0.99
RPGR-210ENST00000494841 SUPT20HL1Q3ZLR7 823 aa8.88□□□□□ -0.99
RPGR-210ENST00000494841 C12orf60Q5U649 245 aa8.88□□□□□ -0.99
RPGR-210ENST00000494841 GIMAP6Q6P9H5 292 aa8.88□□□□□ -0.99
RPGR-210ENST00000494841 SV2BQ7L1I2 683 aa8.88□□□□□ -0.99
RPGR-210ENST00000494841 SULF2Q8IWU5 870 aa8.88□□□□□ -0.99
RPGR-210ENST00000494841 AGGF1Q8N302 714 aaeCLIP8.88□□□□□ -0.99
RPGR-210ENST00000494841 TMEM130Q8N3G9 435 aa8.88□□□□□ -0.99
RPGR-210ENST00000494841 MRRFQ96E11 262 aaKnown RBP8.88□□□□□ -0.99
RPGR-210ENST00000494841 NACAP1Q9BZK3 213 aa8.88□□□□□ -0.99
RPGR-210ENST00000494841 LSG1Q9H089 658 aaKnown RBP8.88□□□□□ -0.99
RPGR-210ENST00000494841 NAPBQ9H115 298 aa8.88□□□□□ -0.99
RPGR-210ENST00000494841 PI4KBQ9UBF8 816 aa8.88□□□□□ -0.99
RPGR-210ENST00000494841 PPP2R3BQ9Y5P8 575 aa8.88□□□□□ -0.99
RPGR-210ENST00000494841 SIPA1L1O43166 1804 aa8.88□□□□□ -0.99
RPGR-210ENST00000494841 SSC5DA1L4H1 1573 aa8.87□□□□□ -0.99
RPGR-210ENST00000494841 RAD50Q92878 1312 aa8.87□□□□□ -0.99
RPGR-210ENST00000494841 PASKQ96RG2 1323 aa8.87□□□□□ -0.99
RPGR-210ENST00000494841 UBE2Q2LH0YL09 131 aa8.87□□□□□ -0.99
RPGR-210ENST00000494841 RECKO95980 971 aa8.87□□□□□ -0.99
RPGR-210ENST00000494841 NME2P22392 152 aa8.87□□□□□ -0.99
RPGR-210ENST00000494841 NOS3P29474 1203 aa8.87□□□□□ -0.99
RPGR-210ENST00000494841 FSTL1Q12841 308 aa8.87□□□□□ -0.99
RPGR-210ENST00000494841 RRP1BQ14684 758 aaKnown RBP8.87□□□□□ -0.99
RPGR-210ENST00000494841 ALX1Q15699 326 aa8.87□□□□□ -0.99
RPGR-210ENST00000494841 CCDC85BQ15834 202 aaPredicted RBP8.87□□□□□ -0.99
RPGR-210ENST00000494841 SBK1Q52WX2 424 aa8.87□□□□□ -0.99
RPGR-210ENST00000494841 Q6ZS46 218 aa8.87□□□□□ -0.99
RPGR-210ENST00000494841 TTC6Q86TZ1 520 aa8.87□□□□□ -0.99
RPGR-210ENST00000494841 PDZD3Q86UT5 571 aa8.87□□□□□ -0.99
RPGR-210ENST00000494841 FOXP4Q8IVH2 680 aaPredicted RBP8.87□□□□□ -0.99
RPGR-210ENST00000494841 SLC44A5Q8NCS7 719 aa8.87□□□□□ -0.99
RPGR-210ENST00000494841 MAP4K1Q92918 833 aa8.87□□□□□ -0.99
RPGR-210ENST00000494841 DSCC1Q9BVC3 393 aa8.87□□□□□ -0.99
RPGR-210ENST00000494841 DHX36Q9H2U1 1008 aaKnown RBP8.87□□□□□ -0.99
RPGR-210ENST00000494841 AKTIPQ9H8T0 292 aa8.87□□□□□ -0.99
RPGR-210ENST00000494841 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.87□□□□□ -0.99
RPGR-210ENST00000494841 ANGEL1Q9UNK9 670 aaKnown RBP8.87□□□□□ -0.99
RPGR-210ENST00000494841 TACC3Q9Y6A5 838 aa8.87□□□□□ -0.99
RPGR-210ENST00000494841 ATRNL1Q5VV63 1379 aa8.86□□□□□ -0.99
RPGR-210ENST00000494841 RPAP1Q9BWH6 1393 aaPredicted RBP8.86□□□□□ -0.99
RPGR-210ENST00000494841 DDX60LQ5H9U9 1706 aaKnown RBP8.86□□□□□ -0.99
RPGR-210ENST00000494841 ZNF213O14771 459 aa8.86□□□□□ -0.99
RPGR-210ENST00000494841 ALX3O95076 343 aa8.86□□□□□ -0.99
RPGR-210ENST00000494841 HLA-DOAP06340 250 aa8.86□□□□□ -0.99
RPGR-210ENST00000494841 NF2P35240 595 aa8.86□□□□□ -0.99
RPGR-210ENST00000494841 PPARAQ07869 468 aa8.86□□□□□ -0.99
RPGR-210ENST00000494841 SHROOM1Q2M3G4 852 aaPredicted RBP8.86□□□□□ -0.99
RPGR-210ENST00000494841 RASIP1Q5U651 963 aa8.86□□□□□ -0.99
RPGR-210ENST00000494841 CRACR2BQ8N4Y2 399 aaPredicted RBP8.86□□□□□ -0.99
RPGR-210ENST00000494841 WFDC12Q8WWY7 111 aa8.86□□□□□ -0.99
RPGR-210ENST00000494841 ZKSCAN4Q969J2 545 aaPredicted RBP8.86□□□□□ -0.99
RPGR-210ENST00000494841 CORO1BQ9BR76 489 aa8.86□□□□□ -0.99
RPGR-210ENST00000494841 RUSC1Q9BVN2 902 aa8.86□□□□□ -0.99
RPGR-210ENST00000494841 DNAJC18Q9H819 358 aa8.86□□□□□ -0.99
RPGR-210ENST00000494841 ARPP21Q9UBL0 812 aaPredicted RBP8.86□□□□□ -0.99
RPGR-210ENST00000494841 SERPINB13Q9UIV8 391 aa8.86□□□□□ -0.99
RPGR-210ENST00000494841 RBM8AQ9Y5S9 174 aaKnown RBP8.86□□□□□ -0.99
RPGR-210ENST00000494841 TAF6LQ9Y6J9 622 aa8.86□□□□□ -0.99
RPGR-210ENST00000494841 PRDM1O75626 825 aa8.85□□□□□ -0.99
RPGR-210ENST00000494841 CYP21A2P08686 494 aa8.85□□□□□ -0.99
RPGR-210ENST00000494841 GSTP1P09211 210 aaKnown RBP8.85□□□□□ -0.99
RPGR-210ENST00000494841 ARNTP27540 789 aa8.85□□□□□ -0.99
RPGR-210ENST00000494841 SHMT1P34896 483 aa8.85□□□□□ -0.99
RPGR-210ENST00000494841 IREB2P48200 963 aaKnown RBP8.85□□□□□ -0.99
RPGR-210ENST00000494841 CDK8P49336 464 aa8.85□□□□□ -0.99
RPGR-210ENST00000494841 JAG1P78504 1218 aa8.85□□□□□ -0.99
RPGR-210ENST00000494841 HTRA3P83110 453 aa8.85□□□□□ -0.99
RPGR-210ENST00000494841 GABPAQ06546 454 aa8.85□□□□□ -0.99
RPGR-210ENST00000494841 METTL16Q86W50 562 aaKnown RBP8.85□□□□□ -0.99
RPGR-210ENST00000494841 AMOTL1Q8IY63 956 aa8.85□□□□□ -0.99
RPGR-210ENST00000494841 C2orf69Q8N8R5 385 aa8.85□□□□□ -0.99
RPGR-210ENST00000494841 NOC4LQ9BVI4 516 aaKnown RBP8.85□□□□□ -0.99
RPGR-210ENST00000494841 ZNF341Q9BYN7 854 aa8.85□□□□□ -0.99
RPGR-210ENST00000494841 BACH2Q9BYV9 841 aa8.85□□□□□ -0.99
RPGR-210ENST00000494841 GBA2Q9HCG7 927 aaPredicted RBP8.85□□□□□ -0.99
RPGR-210ENST00000494841 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.85□□□□□ -0.99
RPGR-210ENST00000494841 CTNNA3Q9UI47 895 aa8.85□□□□□ -0.99
RPGR-210ENST00000494841 COL2A1P02458 1487 aaPredicted RBP8.84□□□□□ -0.99
RPGR-210ENST00000494841 LAMB1P07942 1786 aa8.84□□□□□ -0.99
RPGR-210ENST00000494841 MYH8P13535 1937 aa8.84□□□□□ -0.99
RPGR-210ENST00000494841 BMP6P22004 513 aa8.84□□□□□ -0.99
RPGR-210ENST00000494841 ZNF252P-AS1Q0IIN9 211 aa8.84□□□□□ -0.99
RPGR-210ENST00000494841 NECTIN1Q15223 517 aa8.84□□□□□ -0.99
RPGR-210ENST00000494841 IMMTQ16891 758 aaKnown RBP8.84□□□□□ -0.99
RPGR-210ENST00000494841 PCNX4Q63HM2 1172 aa8.84□□□□□ -0.99
RPGR-210ENST00000494841 DCAF15Q66K64 600 aa8.84□□□□□ -0.99
RPGR-210ENST00000494841 CREB3L3Q68CJ9 461 aa8.84□□□□□ -0.99
RPGR-210ENST00000494841 TATDN1Q6P1N9 297 aa8.84□□□□□ -0.99
RPGR-210ENST00000494841 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.84□□□□□ -0.99
RPGR-210ENST00000494841 C16orf86Q6ZW13 317 aa8.84□□□□□ -0.99
RPGR-210ENST00000494841 ARMC9Q7Z3E5 817 aa8.84□□□□□ -0.99
RPGR-210ENST00000494841 TBC1D10CQ8IV04 446 aa8.84□□□□□ -0.99
RPGR-210ENST00000494841 HOOK2Q96ED9 719 aa8.84□□□□□ -0.99
RPGR-210ENST00000494841 CLMNQ96JQ2 1002 aa8.84□□□□□ -0.99
RPGR-210ENST00000494841 WRNIP1Q96S55 665 aa8.84□□□□□ -0.99
RPGR-210ENST00000494841 TMPRSS13Q9BYE2 586 aa8.84□□□□□ -0.99
RPGR-210ENST00000494841 RNF208Q9H0X6 261 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms