RNA–Protein interactions for RNA: ENST00000494620.1

SCRN1-209, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-209ENST00000494620 TYW1BQ6NUM6 668 aa12.54□□□□□ -0.4
SCRN1-209ENST00000494620 NIPA1Q7RTP0 329 aa12.54□□□□□ -0.4
SCRN1-209ENST00000494620 PLA2G4DQ86XP0 818 aa12.54□□□□□ -0.4
SCRN1-209ENST00000494620 FAM177A1Q8N128 213 aaPredicted RBP12.54□□□□□ -0.4
SCRN1-209ENST00000494620 PGBD1Q96JS3 809 aa12.54□□□□□ -0.4
SCRN1-209ENST00000494620 SLC9A7Q96T83 725 aa12.54□□□□□ -0.4
SCRN1-209ENST00000494620 CDX2Q99626 313 aaPredicted RBP12.54□□□□□ -0.4
SCRN1-209ENST00000494620 ZNF576Q9H609 170 aa12.54□□□□□ -0.4
SCRN1-209ENST00000494620 BCAS3Q9H6U6 928 aa12.54□□□□□ -0.4
SCRN1-209ENST00000494620 CXXC1Q9P0U4 656 aaPredicted RBP12.54□□□□□ -0.4
SCRN1-209ENST00000494620 EMSYQ7Z589 1322 aa12.54□□□□□ -0.4
SCRN1-209ENST00000494620 ABHD14A-ACY1A0A1B0GW23 586 aa12.53□□□□□ -0.4
SCRN1-209ENST00000494620 RRN3P2A6NIE6 340 aa12.53□□□□□ -0.4
SCRN1-209ENST00000494620 RPLP2P05387 115 aaKnown RBP12.53□□□□□ -0.4
SCRN1-209ENST00000494620 CYP3A4P08684 503 aa12.53□□□□□ -0.4
SCRN1-209ENST00000494620 ZNF200P98182 395 aaPredicted RBP12.53□□□□□ -0.4
SCRN1-209ENST00000494620 SETQ01105 290 aaPredicted RBP12.53□□□□□ -0.4
SCRN1-209ENST00000494620 STK3Q13188 491 aa12.53□□□□□ -0.4
SCRN1-209ENST00000494620 TOB2Q14106 344 aaPredicted RBP12.53□□□□□ -0.4
SCRN1-209ENST00000494620 NTRK3Q16288 839 aa12.53□□□□□ -0.4
SCRN1-209ENST00000494620 GALNT17Q6IS24 598 aa12.53□□□□□ -0.4
SCRN1-209ENST00000494620 TAF2Q6P1X5 1199 aa12.53□□□□□ -0.4
SCRN1-209ENST00000494620 CNKSR3Q6P9H4 555 aa12.53□□□□□ -0.4
SCRN1-209ENST00000494620 SERINC5Q86VE9 423 aa12.53□□□□□ -0.4
SCRN1-209ENST00000494620 GAS2L1Q99501 681 aaPredicted RBP12.53□□□□□ -0.4
SCRN1-209ENST00000494620 ZBED2Q9BTP6 218 aa12.53□□□□□ -0.4
SCRN1-209ENST00000494620 PBX4Q9BYU1 374 aa12.53□□□□□ -0.4
SCRN1-209ENST00000494620 TBC1D22BQ9NU19 505 aa12.53□□□□□ -0.4
SCRN1-209ENST00000494620 SETD4Q9NVD3 440 aa12.53□□□□□ -0.4
SCRN1-209ENST00000494620 TMEM260Q9NX78 707 aa12.53□□□□□ -0.4
SCRN1-209ENST00000494620 PCDHA11Q9Y5I1 949 aa12.53□□□□□ -0.4
SCRN1-209ENST00000494620 NFASCO94856 1347 aa12.53□□□□□ -0.4
SCRN1-209ENST00000494620 LRRC37A2A6NM11 1700 aa12.53□□□□□ -0.4
SCRN1-209ENST00000494620 SCN10AQ9Y5Y9 1956 aa12.52□□□□□ -0.4
SCRN1-209ENST00000494620 GSTTP1A0A1W2PQM5 241 aa12.52□□□□□ -0.41
SCRN1-209ENST00000494620 GRXCR1A8MXD5 290 aa12.52□□□□□ -0.41
SCRN1-209ENST00000494620 BACH1O14867 736 aa12.52□□□□□ -0.41
SCRN1-209ENST00000494620 TREHO43280 583 aa12.52□□□□□ -0.41
SCRN1-209ENST00000494620 ARP10275 920 aa12.52□□□□□ -0.41
SCRN1-209ENST00000494620 CLK2P49760 499 aaKnown RBP12.52□□□□□ -0.41
SCRN1-209ENST00000494620 SLC26A2P50443 739 aa12.52□□□□□ -0.41
SCRN1-209ENST00000494620 STAT5BP51692 787 aa12.52□□□□□ -0.41
SCRN1-209ENST00000494620 PPFIA1Q13136 1202 aa12.52□□□□□ -0.41
SCRN1-209ENST00000494620 PKN1Q16512 942 aa12.52□□□□□ -0.41
SCRN1-209ENST00000494620 ZNF618Q5T7W0 954 aa12.52□□□□□ -0.41
SCRN1-209ENST00000494620 FAM160B1Q5W0V3 765 aa12.52□□□□□ -0.41
SCRN1-209ENST00000494620 MIS18BP1Q6P0N0 1132 aa12.52□□□□□ -0.41
SCRN1-209ENST00000494620 WASF1Q92558 559 aa12.52□□□□□ -0.41
SCRN1-209ENST00000494620 NCOA5Q9HCD5 579 aaKnown RBP12.52□□□□□ -0.41
SCRN1-209ENST00000494620 AGO4Q9HCK5 861 aaKnown RBP12.52□□□□□ -0.41
SCRN1-209ENST00000494620 NID2Q14112 1375 aa12.52□□□□□ -0.41
SCRN1-209ENST00000494620 PPFIA3O75145 1194 aa12.51□□□□□ -0.41
SCRN1-209ENST00000494620 LGR5O75473 907 aa12.51□□□□□ -0.41
SCRN1-209ENST00000494620 FOSL2P15408 326 aa12.51□□□□□ -0.41
SCRN1-209ENST00000494620 MARK3P27448 753 aa12.51□□□□□ -0.41
SCRN1-209ENST00000494620 USP11P51784 963 aa12.51□□□□□ -0.41
SCRN1-209ENST00000494620 ACTR2P61160 394 aa12.51□□□□□ -0.41
SCRN1-209ENST00000494620 PLPPR4Q7Z2D5 763 aa12.51□□□□□ -0.41
SCRN1-209ENST00000494620 TRIM50Q86XT4 487 aa12.51□□□□□ -0.41
SCRN1-209ENST00000494620 CYP2W1Q8TAV3 490 aa12.51□□□□□ -0.41
SCRN1-209ENST00000494620 SEPT8Q92599 483 aa12.51□□□□□ -0.41
SCRN1-209ENST00000494620 DHX38Q92620 1227 aaKnown RBP12.51□□□□□ -0.41
SCRN1-209ENST00000494620 GUCD1Q96NT3 240 aa12.51□□□□□ -0.41
SCRN1-209ENST00000494620 LARP6Q9BRS8 491 aaKnown RBP12.51□□□□□ -0.41
SCRN1-209ENST00000494620 ZNF577Q9BSK1 485 aa12.51□□□□□ -0.41
SCRN1-209ENST00000494620 TTYH1Q9H313 450 aaPredicted RBP12.51□□□□□ -0.41
SCRN1-209ENST00000494620 VPS54Q9P1Q0 977 aa12.51□□□□□ -0.41
SCRN1-209ENST00000494620 TRPC6Q9Y210 931 aa12.51□□□□□ -0.41
SCRN1-209ENST00000494620 LTBP2Q14767 1821 aa12.51□□□□□ -0.41
SCRN1-209ENST00000494620 KIAA1217Q5T5P2 1943 aa12.5□□□□□ -0.41
SCRN1-209ENST00000494620 M0QZ92 97 aa12.5□□□□□ -0.41
SCRN1-209ENST00000494620 IPO5O00410 1097 aaKnown RBP12.5□□□□□ -0.41
SCRN1-209ENST00000494620 CXCL10P02778 98 aa12.5□□□□□ -0.41
SCRN1-209ENST00000494620 PBX2P40425 430 aa12.5□□□□□ -0.41
SCRN1-209ENST00000494620 GRIK4Q16099 956 aa12.5□□□□□ -0.41
SCRN1-209ENST00000494620 PPP2R2DQ66LE6 453 aa12.5□□□□□ -0.41
SCRN1-209ENST00000494620 MYLIPQ8WY64 445 aa12.5□□□□□ -0.41
SCRN1-209ENST00000494620 CTAGE1Q96RT6 745 aa12.5□□□□□ -0.41
SCRN1-209ENST00000494620 NKX2-4Q9H2Z4 354 aa12.5□□□□□ -0.41
SCRN1-209ENST00000494620 PCDHA4Q9UN74 947 aa12.5□□□□□ -0.41
SCRN1-209ENST00000494620 DDX39AO00148 427 aaKnown RBP12.49□□□□□ -0.41
SCRN1-209ENST00000494620 TLL1O43897 1013 aa12.49□□□□□ -0.41
SCRN1-209ENST00000494620 NBNO60934 754 aa12.49□□□□□ -0.41
SCRN1-209ENST00000494620 AMHP03971 560 aa12.49□□□□□ -0.41
SCRN1-209ENST00000494620 PSAPP07602 524 aa12.49□□□□□ -0.41
SCRN1-209ENST00000494620 CIITAP33076 1130 aa12.49□□□□□ -0.41
SCRN1-209ENST00000494620 RABGGTBP53611 331 aa12.49□□□□□ -0.41
SCRN1-209ENST00000494620 IGBP1P78318 339 aa12.49□□□□□ -0.41
SCRN1-209ENST00000494620 KRT76Q01546 638 aa12.49□□□□□ -0.41
SCRN1-209ENST00000494620 GRIN2CQ14957 1233 aa12.49□□□□□ -0.41
SCRN1-209ENST00000494620 TRIM71Q2Q1W2 868 aaKnown RBP12.49□□□□□ -0.41
SCRN1-209ENST00000494620 PRR16Q569H4 304 aa12.49□□□□□ -0.41
SCRN1-209ENST00000494620 IER5Q5VY09 327 aa12.49□□□□□ -0.41
SCRN1-209ENST00000494620 HERC6Q8IVU3 1022 aa12.49□□□□□ -0.41
SCRN1-209ENST00000494620 CKAP2LQ8IYA6 745 aa12.49□□□□□ -0.41
SCRN1-209ENST00000494620 SMAP1Q8IYB5 467 aaPredicted RBP12.49□□□□□ -0.41
SCRN1-209ENST00000494620 BLIDQ8IZY5 108 aa12.49□□□□□ -0.41
SCRN1-209ENST00000494620 LMBR1Q8WVP7 490 aa12.49□□□□□ -0.41
SCRN1-209ENST00000494620 APBB2Q92870 758 aa12.49□□□□□ -0.41
SCRN1-209ENST00000494620 BRMS1Q9HCU9 246 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms