RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 SLC28A3Q9HAS3 691 aa17.83■□□□□ 0.44
LIMS2-216ENST00000494613 RBAK-RBAKDNI3L0D1 243 aa17.82■□□□□ 0.44
LIMS2-216ENST00000494613 CXCL10P02778 98 aa17.82■□□□□ 0.44
LIMS2-216ENST00000494613 IFNAR1P17181 557 aa17.82■□□□□ 0.44
LIMS2-216ENST00000494613 ZNF76P36508 570 aa17.82■□□□□ 0.44
LIMS2-216ENST00000494613 SREBF1P36956 1147 aa17.82■□□□□ 0.44
LIMS2-216ENST00000494613 THPOP40225 353 aa17.82■□□□□ 0.44
LIMS2-216ENST00000494613 ADAM17P78536 824 aa17.82■□□□□ 0.44
LIMS2-216ENST00000494613 AP3B2Q13367 1082 aa17.82■□□□□ 0.44
LIMS2-216ENST00000494613 ZNF274Q96GC6 653 aaPredicted RBP17.82■□□□□ 0.44
LIMS2-216ENST00000494613 UPF3BQ9BZI7 483 aaKnown RBP17.82■□□□□ 0.44
LIMS2-216ENST00000494613 C6orf50Q9HD87 102 aa17.82■□□□□ 0.44
LIMS2-216ENST00000494613 ZNF215Q9UL58 517 aaPredicted RBP17.82■□□□□ 0.44
LIMS2-216ENST00000494613 PCDHA11Q9Y5I1 949 aa17.82■□□□□ 0.44
LIMS2-216ENST00000494613 SCN5AQ14524 2016 aa17.82■□□□□ 0.44
LIMS2-216ENST00000494613 ESYT2A0FGR8 921 aa17.81■□□□□ 0.44
LIMS2-216ENST00000494613 RSPH10B2B2RC85 870 aa17.81■□□□□ 0.44
LIMS2-216ENST00000494613 RSPH10BP0C881 870 aa17.81■□□□□ 0.44
LIMS2-216ENST00000494613 ARHGAP4P98171 946 aa17.81■□□□□ 0.44
LIMS2-216ENST00000494613 MBTPS1Q14703 1052 aa17.81■□□□□ 0.44
LIMS2-216ENST00000494613 TCTN1Q2MV58 587 aa17.81■□□□□ 0.44
LIMS2-216ENST00000494613 SLC26A6Q9BXS9 759 aa17.81■□□□□ 0.44
LIMS2-216ENST00000494613 RNF26Q9BY78 433 aaPredicted RBP17.81■□□□□ 0.44
LIMS2-216ENST00000494613 SMARCAD1Q9H4L7 1026 aa17.81■□□□□ 0.44
LIMS2-216ENST00000494613 PDRG1Q9NUG6 133 aa17.81■□□□□ 0.44
LIMS2-216ENST00000494613 SLC9A2Q9UBY0 812 aa17.81■□□□□ 0.44
LIMS2-216ENST00000494613 NID2Q14112 1375 aa17.8■□□□□ 0.44
LIMS2-216ENST00000494613 NRCAMQ92823 1304 aa17.8■□□□□ 0.44
LIMS2-216ENST00000494613 BAIAP3O94812 1187 aa17.8■□□□□ 0.44
LIMS2-216ENST00000494613 CENPBP07199 599 aaPredicted RBP17.8■□□□□ 0.44
LIMS2-216ENST00000494613 CYP3A4P08684 503 aa17.8■□□□□ 0.44
LIMS2-216ENST00000494613 FOSL2P15408 326 aa17.8■□□□□ 0.44
LIMS2-216ENST00000494613 GNA11P29992 359 aa17.8■□□□□ 0.44
LIMS2-216ENST00000494613 CNKSR3Q6P9H4 555 aa17.8■□□□□ 0.44
LIMS2-216ENST00000494613 CCDC12Q8WUD4 166 aaPredicted RBP17.8■□□□□ 0.44
LIMS2-216ENST00000494613 CRYGNQ8WXF5 182 aa17.8■□□□□ 0.44
LIMS2-216ENST00000494613 GLG1Q92896 1179 aa17.8■□□□□ 0.44
LIMS2-216ENST00000494613 PCYT2Q99447 389 aa17.8■□□□□ 0.44
LIMS2-216ENST00000494613 PRDM12Q9H4Q4 367 aa17.8■□□□□ 0.44
LIMS2-216ENST00000494613 AGO4Q9HCK5 861 aaKnown RBP17.8■□□□□ 0.44
LIMS2-216ENST00000494613 TET1Q8NFU7 2136 aa17.8■□□□□ 0.44
LIMS2-216ENST00000494613 NFASCO94856 1347 aa17.79■□□□□ 0.44
LIMS2-216ENST00000494613 FAM86B1E9PN63 330 aa17.79■□□□□ 0.44
LIMS2-216ENST00000494613 FAM86B2P0C5J1 330 aa17.79■□□□□ 0.44
LIMS2-216ENST00000494613 SSRP1Q08945 709 aaKnown RBP17.79■□□□□ 0.44
LIMS2-216ENST00000494613 ITGB3BPQ13352 177 aaPredicted RBP17.79■□□□□ 0.44
LIMS2-216ENST00000494613 IKBKEQ14164 716 aa17.79■□□□□ 0.44
LIMS2-216ENST00000494613 MCTP2Q6DN12 878 aa17.79■□□□□ 0.44
LIMS2-216ENST00000494613 NIPA1Q7RTP0 329 aa17.79■□□□□ 0.44
LIMS2-216ENST00000494613 MAFAQ8NHW3 353 aaPredicted RBP17.79■□□□□ 0.44
LIMS2-216ENST00000494613 SLC9A7Q96T83 725 aa17.79■□□□□ 0.44
LIMS2-216ENST00000494613 SDF4Q9BRK5 362 aa17.79■□□□□ 0.44
LIMS2-216ENST00000494613 JPH1Q9HDC5 661 aaPredicted RBP17.79■□□□□ 0.44
LIMS2-216ENST00000494613 ERAP1Q9NZ08 941 aa17.79■□□□□ 0.44
LIMS2-216ENST00000494613 DOCK5Q9H7D0 1870 aa17.79■□□□□ 0.44
LIMS2-216ENST00000494613 ABHD14A-ACY1A0A1B0GW23 586 aa17.78■□□□□ 0.44
LIMS2-216ENST00000494613 KIF28PB7ZC32 967 aa17.78■□□□□ 0.44
LIMS2-216ENST00000494613 LGR5O75473 907 aa17.78■□□□□ 0.44
LIMS2-216ENST00000494613 ATG7O95352 703 aa17.78■□□□□ 0.44
LIMS2-216ENST00000494613 MARK3P27448 753 aa17.78■□□□□ 0.44
LIMS2-216ENST00000494613 ACTR2P61160 394 aa17.78■□□□□ 0.44
LIMS2-216ENST00000494613 STK3Q13188 491 aa17.78■□□□□ 0.44
LIMS2-216ENST00000494613 PLA2G4DQ86XP0 818 aa17.78■□□□□ 0.44
LIMS2-216ENST00000494613 HERC6Q8IVU3 1022 aa17.78■□□□□ 0.44
LIMS2-216ENST00000494613 DBF4BQ8NFT6 615 aa17.78■□□□□ 0.44
LIMS2-216ENST00000494613 LMBR1Q8WVP7 490 aa17.78■□□□□ 0.44
LIMS2-216ENST00000494613 OSBPL7Q9BZF2 842 aa17.78■□□□□ 0.44
LIMS2-216ENST00000494613 SH3GLB2Q9NR46 395 aa17.78■□□□□ 0.44
LIMS2-216ENST00000494613 VPS54Q9P1Q0 977 aa17.78■□□□□ 0.44
LIMS2-216ENST00000494613 KCNJ6P48051 423 aa17.77■□□□□ 0.44
LIMS2-216ENST00000494613 WDR5P61964 334 aaKnown RBP17.77■□□□□ 0.44
LIMS2-216ENST00000494613 MARCH8Q5T0T0 291 aa17.77■□□□□ 0.44
LIMS2-216ENST00000494613 REXO1Q8N1G1 1221 aaKnown RBP17.77■□□□□ 0.44
LIMS2-216ENST00000494613 BICD2Q8TD16 824 aa17.77■□□□□ 0.44
LIMS2-216ENST00000494613 UIMC1Q96RL1 719 aa17.77■□□□□ 0.44
LIMS2-216ENST00000494613 EMSYQ7Z589 1322 aa17.76■□□□□ 0.43
LIMS2-216ENST00000494613 IGLV3-22A0A075B6J6 115 aa17.76■□□□□ 0.43
LIMS2-216ENST00000494613 CPLX1O14810 134 aa17.76■□□□□ 0.43
LIMS2-216ENST00000494613 DHX15O43143 795 aaKnown RBP17.76■□□□□ 0.43
LIMS2-216ENST00000494613 EDIL3O43854 480 aa17.76■□□□□ 0.43
LIMS2-216ENST00000494613 INSRRP14616 1297 aa17.76■□□□□ 0.43
LIMS2-216ENST00000494613 STAT5BP51692 787 aa17.76■□□□□ 0.43
LIMS2-216ENST00000494613 NLRP5P59047 1200 aa17.76■□□□□ 0.43
LIMS2-216ENST00000494613 PLEKHG4Q58EX7 1191 aa17.76■□□□□ 0.43
LIMS2-216ENST00000494613 FAM26DQ5JW98 314 aa17.76■□□□□ 0.43
LIMS2-216ENST00000494613 PPP2R2DQ66LE6 453 aa17.76■□□□□ 0.43
LIMS2-216ENST00000494613 PLPPR4Q7Z2D5 763 aa17.76■□□□□ 0.43
LIMS2-216ENST00000494613 TMCO2Q7Z6W1 182 aaPredicted RBP17.76■□□□□ 0.43
LIMS2-216ENST00000494613 TRIM22Q8IYM9 498 aa17.76■□□□□ 0.43
LIMS2-216ENST00000494613 RASGRP4Q8TDF6 673 aa17.76■□□□□ 0.43
LIMS2-216ENST00000494613 GAS2L1Q99501 681 aaPredicted RBP17.76■□□□□ 0.43
LIMS2-216ENST00000494613 AZI2Q9H6S1 392 aa17.76■□□□□ 0.43
LIMS2-216ENST00000494613 CHD9Q3L8U1 2897 aa17.75■□□□□ 0.43
LIMS2-216ENST00000494613 RRN3P2A6NIE6 340 aa17.75■□□□□ 0.43
LIMS2-216ENST00000494613 CAND2O75155 1236 aa17.75■□□□□ 0.43
LIMS2-216ENST00000494613 CHRNA1P02708 482 aa17.75■□□□□ 0.43
LIMS2-216ENST00000494613 CA3P07451 260 aa17.75■□□□□ 0.43
LIMS2-216ENST00000494613 DEFB103AP81534 67 aa17.75■□□□□ 0.43
LIMS2-216ENST00000494613 PPFIA1Q13136 1202 aa17.75■□□□□ 0.43
LIMS2-216ENST00000494613 ADGRE1Q14246 886 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms