RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 MYO10Q9HD67 2058 aa12.94□□□□□ -0.34
TRIM59-206ENST00000494486 TGM1P22735 817 aa12.94□□□□□ -0.34
TRIM59-206ENST00000494486 KCTD1Q719H9 257 aa12.94□□□□□ -0.34
TRIM59-206ENST00000494486 DDX1Q92499 740 aaKnown RBP12.94□□□□□ -0.34
TRIM59-206ENST00000494486 DBR1Q9UK59 544 aaKnown RBP12.94□□□□□ -0.34
TRIM59-206ENST00000494486 EOMESO95936 686 aa12.93□□□□□ -0.34
TRIM59-206ENST00000494486 STAG3L1P0CL83 205 aa12.93□□□□□ -0.34
TRIM59-206ENST00000494486 GNAT1P11488 350 aa12.93□□□□□ -0.34
TRIM59-206ENST00000494486 ADD2P35612 726 aa12.93□□□□□ -0.34
TRIM59-206ENST00000494486 PAN2Q504Q3 1202 aaKnown RBP12.93□□□□□ -0.34
TRIM59-206ENST00000494486 ATAT1Q5SQI0 421 aa12.93□□□□□ -0.34
TRIM59-206ENST00000494486 LRSAM1Q6UWE0 723 aa12.93□□□□□ -0.34
TRIM59-206ENST00000494486 NPAS4Q8IUM7 802 aa12.93□□□□□ -0.34
TRIM59-206ENST00000494486 STK11IPQ8N1F8 1099 aa12.93□□□□□ -0.34
TRIM59-206ENST00000494486 SSH3Q8TE77 659 aa12.93□□□□□ -0.34
TRIM59-206ENST00000494486 ACSF2Q96CM8 615 aaPredicted RBP12.93□□□□□ -0.34
TRIM59-206ENST00000494486 RNPEPQ9H4A4 650 aa12.93□□□□□ -0.34
TRIM59-206ENST00000494486 EHMT1Q9H9B1 1298 aa12.93□□□□□ -0.34
TRIM59-206ENST00000494486 DLGAP2Q9P1A6 1054 aa12.93□□□□□ -0.34
TRIM59-206ENST00000494486 ZMIZ1Q9ULJ6 1067 aa12.93□□□□□ -0.34
TRIM59-206ENST00000494486 NOP58Q9Y2X3 529 aaKnown RBP12.93□□□□□ -0.34
TRIM59-206ENST00000494486 SIT1Q9Y3P8 196 aa12.93□□□□□ -0.34
TRIM59-206ENST00000494486 KRBA1A5PL33 1030 aa12.92□□□□□ -0.34
TRIM59-206ENST00000494486 GOLIM4O00461 696 aa12.92□□□□□ -0.34
TRIM59-206ENST00000494486 FGF18O76093 207 aa12.92□□□□□ -0.34
TRIM59-206ENST00000494486 SMIM10L2AP0DMW4 78 aa12.92□□□□□ -0.34
TRIM59-206ENST00000494486 SMIM10L2BP0DMW5 78 aa12.92□□□□□ -0.34
TRIM59-206ENST00000494486 GHRP10912 638 aa12.92□□□□□ -0.34
TRIM59-206ENST00000494486 STXBP2Q15833 593 aa12.92□□□□□ -0.34
TRIM59-206ENST00000494486 SPECC1Q5M775 1068 aa12.92□□□□□ -0.34
TRIM59-206ENST00000494486 PPP4R3BQ5MIZ7 849 aa12.92□□□□□ -0.34
TRIM59-206ENST00000494486 PHLDB3Q6NSJ2 640 aa12.92□□□□□ -0.34
TRIM59-206ENST00000494486 NEDD1Q8NHV4 660 aa12.92□□□□□ -0.34
TRIM59-206ENST00000494486 ATRIPQ8WXE1 791 aa12.92□□□□□ -0.34
TRIM59-206ENST00000494486 CHMP4CQ96CF2 233 aa12.92□□□□□ -0.34
TRIM59-206ENST00000494486 C16orf70Q9BSU1 422 aa12.92□□□□□ -0.34
TRIM59-206ENST00000494486 TBC1D17Q9HA65 648 aa12.92□□□□□ -0.34
TRIM59-206ENST00000494486 NGRNQ9NPE2 291 aaKnown RBP12.92□□□□□ -0.34
TRIM59-206ENST00000494486 TMEM260Q9NX78 707 aa12.92□□□□□ -0.34
TRIM59-206ENST00000494486 PUF60Q9UHX1 559 aaKnown RBP12.92□□□□□ -0.34
TRIM59-206ENST00000494486 LZTS1Q9Y250 596 aa12.92□□□□□ -0.34
TRIM59-206ENST00000494486 PCDHGA2Q9Y5H1 932 aa12.92□□□□□ -0.34
TRIM59-206ENST00000494486 TBC1D4O60343 1298 aa12.91□□□□□ -0.34
TRIM59-206ENST00000494486 CHRNA1P02708 482 aa12.91□□□□□ -0.34
TRIM59-206ENST00000494486 DCNP07585 359 aaKnown RBP12.91□□□□□ -0.34
TRIM59-206ENST00000494486 RARSP54136 660 aaKnown RBP12.91□□□□□ -0.34
TRIM59-206ENST00000494486 PLPP4Q5VZY2 271 aa12.91□□□□□ -0.34
TRIM59-206ENST00000494486 KIAA1841Q6NSI8 718 aa12.91□□□□□ -0.34
TRIM59-206ENST00000494486 XRRA1Q6P2D8 792 aa12.91□□□□□ -0.34
TRIM59-206ENST00000494486 RGS22Q8NE09 1264 aa12.91□□□□□ -0.34
TRIM59-206ENST00000494486 KCNK12Q9HB15 430 aa12.91□□□□□ -0.34
TRIM59-206ENST00000494486 IGSF5Q9NSI5 407 aa12.91□□□□□ -0.34
TRIM59-206ENST00000494486 IGSF9Q9P2J2 1179 aa12.91□□□□□ -0.34
TRIM59-206ENST00000494486 FBXO4Q9UKT5 387 aa12.91□□□□□ -0.34
TRIM59-206ENST00000494486 SMG5Q9UPR3 1016 aaKnown RBP12.91□□□□□ -0.34
TRIM59-206ENST00000494486 MINDY4BA8MYZ0 360 aa12.9□□□□□ -0.34
TRIM59-206ENST00000494486 H3BRB1 525 aa12.9□□□□□ -0.34
TRIM59-206ENST00000494486 ATP8B2P98198 1209 aa12.9□□□□□ -0.34
TRIM59-206ENST00000494486 LPIN1Q14693 890 aa12.9□□□□□ -0.34
TRIM59-206ENST00000494486 SLFNL1Q499Z3 407 aa12.9□□□□□ -0.34
TRIM59-206ENST00000494486 SPOUT1Q5T280 376 aaKnown RBP12.9□□□□□ -0.34
TRIM59-206ENST00000494486 GIMAP6Q6P9H5 292 aa12.9□□□□□ -0.34
TRIM59-206ENST00000494486 RASGRP2Q7LDG7 609 aa12.9□□□□□ -0.34
TRIM59-206ENST00000494486 OTOP3Q7RTS5 596 aa12.9□□□□□ -0.34
TRIM59-206ENST00000494486 THNSL1Q8IYQ7 743 aa12.9□□□□□ -0.34
TRIM59-206ENST00000494486 MAML2Q8IZL2 1156 aaPredicted RBP12.9□□□□□ -0.34
TRIM59-206ENST00000494486 NSUN6Q8TEA1 469 aaKnown RBP12.9□□□□□ -0.34
TRIM59-206ENST00000494486 IWS1Q96ST2 819 aa12.9□□□□□ -0.34
TRIM59-206ENST00000494486 DNAJC2Q99543 621 aaKnown RBP12.9□□□□□ -0.34
TRIM59-206ENST00000494486 GPR20Q99678 358 aa12.9□□□□□ -0.34
TRIM59-206ENST00000494486 TCF25Q9BQ70 676 aa12.9□□□□□ -0.34
TRIM59-206ENST00000494486 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.9□□□□□ -0.34
TRIM59-206ENST00000494486 MAF1Q9H063 256 aa12.9□□□□□ -0.34
TRIM59-206ENST00000494486 EPC1Q9H2F5 836 aa12.9□□□□□ -0.34
TRIM59-206ENST00000494486 TUT1Q9H6E5 874 aaKnown RBP12.9□□□□□ -0.34
TRIM59-206ENST00000494486 GMEB2Q9UKD1 530 aa12.9□□□□□ -0.34
TRIM59-206ENST00000494486 MRVI1Q9Y6F6 885 aa12.9□□□□□ -0.34
TRIM59-206ENST00000494486 PRDM1O75626 825 aa12.89□□□□□ -0.35
TRIM59-206ENST00000494486 CFHP08603 1231 aa12.89□□□□□ -0.35
TRIM59-206ENST00000494486 WEE2P0C1S8 567 aa12.89□□□□□ -0.35
TRIM59-206ENST00000494486 TSPY3P0CV98 308 aa12.89□□□□□ -0.35
TRIM59-206ENST00000494486 TSPY8P0CW00 308 aa12.89□□□□□ -0.35
TRIM59-206ENST00000494486 NONOQ15233 471 aaKnown RBP eCLIP12.89□□□□□ -0.35
TRIM59-206ENST00000494486 UBE3CQ15386 1083 aa12.89□□□□□ -0.35
TRIM59-206ENST00000494486 N4BP2L1Q5TBK1 243 aaPredicted RBP12.89□□□□□ -0.35
TRIM59-206ENST00000494486 MYSM1Q5VVJ2 828 aa12.89□□□□□ -0.35
TRIM59-206ENST00000494486 BTNL9Q6UXG8 535 aa12.89□□□□□ -0.35
TRIM59-206ENST00000494486 AACSQ86V21 672 aa12.89□□□□□ -0.35
TRIM59-206ENST00000494486 KDF1Q8NAX2 398 aaPredicted RBP12.89□□□□□ -0.35
TRIM59-206ENST00000494486 ARHGAP45Q92619 1136 aa12.89□□□□□ -0.35
TRIM59-206ENST00000494486 SPATA33Q96N06 139 aa12.89□□□□□ -0.35
TRIM59-206ENST00000494486 FTHL17Q9BXU8 183 aa12.89□□□□□ -0.35
TRIM59-206ENST00000494486 PARD6AQ9NPB6 346 aa12.89□□□□□ -0.35
TRIM59-206ENST00000494486 ENTPD7Q9NQZ7 604 aa12.89□□□□□ -0.35
TRIM59-206ENST00000494486 HCFC2Q9Y5Z7 792 aa12.89□□□□□ -0.35
TRIM59-206ENST00000494486 PLIN4Q96Q06 1357 aa12.89□□□□□ -0.35
TRIM59-206ENST00000494486 BAZ2AQ9UIF9 1905 aaKnown RBP12.88□□□□□ -0.35
TRIM59-206ENST00000494486 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.88□□□□□ -0.35
TRIM59-206ENST00000494486 HIDE1A8MVS5 230 aa12.88□□□□□ -0.35
TRIM59-206ENST00000494486 BCAR3O75815 825 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms