RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 LINC01356Q8N9X3 169 aa3.37□□□□□ -1.87
LMNB1-207ENST00000494185 KYQ8NBH2 561 aa3.37□□□□□ -1.87
LMNB1-207ENST00000494185 SMARCC2Q8TAQ2 1214 aa3.37□□□□□ -1.87
LMNB1-207ENST00000494185 CALML6Q8TD86 181 aa3.37□□□□□ -1.87
LMNB1-207ENST00000494185 ZBTB8AQ96BR9 441 aa3.37□□□□□ -1.87
LMNB1-207ENST00000494185 SGPP1Q9BX95 441 aa3.37□□□□□ -1.87
LMNB1-207ENST00000494185 IRF2BPLQ9H1B7 796 aa3.37□□□□□ -1.87
LMNB1-207ENST00000494185 L2HGDHQ9H9P8 463 aa3.37□□□□□ -1.87
LMNB1-207ENST00000494185 RXFP1Q9HBX9 757 aa3.37□□□□□ -1.87
LMNB1-207ENST00000494185 DLL4Q9NR61 685 aa3.37□□□□□ -1.87
LMNB1-207ENST00000494185 FTSJ1Q9UET6 329 aa3.37□□□□□ -1.87
LMNB1-207ENST00000494185 FBXO10Q9UK96 956 aa3.37□□□□□ -1.87
LMNB1-207ENST00000494185 SRPK3Q9UPE1 567 aa3.37□□□□□ -1.87
LMNB1-207ENST00000494185 SIT1Q9Y3P8 196 aa3.37□□□□□ -1.87
LMNB1-207ENST00000494185 TNPO3Q9Y5L0 923 aaKnown RBP3.37□□□□□ -1.87
LMNB1-207ENST00000494185 TCRBV5S2A0A599 114 aa3.36□□□□□ -1.87
LMNB1-207ENST00000494185 SLC12A8A0AV02 714 aa3.36□□□□□ -1.87
LMNB1-207ENST00000494185 PRAMEF25A6NGN4 478 aa3.36□□□□□ -1.87
LMNB1-207ENST00000494185 H7C1D1 291 aa3.36□□□□□ -1.87
LMNB1-207ENST00000494185 TADA3O75528 432 aa3.36□□□□□ -1.87
LMNB1-207ENST00000494185 CYP1A1P04798 512 aaPredicted RBP3.36□□□□□ -1.87
LMNB1-207ENST00000494185 ENO2P09104 434 aaPredicted RBP3.36□□□□□ -1.87
LMNB1-207ENST00000494185 PYGMP11217 842 aa3.36□□□□□ -1.87
LMNB1-207ENST00000494185 COL6A2P12110 1019 aa3.36□□□□□ -1.87
LMNB1-207ENST00000494185 SDSP20132 328 aa3.36□□□□□ -1.87
LMNB1-207ENST00000494185 IGFBP6P24592 240 aaPredicted RBP3.36□□□□□ -1.87
LMNB1-207ENST00000494185 EPHB3P54753 998 aa3.36□□□□□ -1.87
LMNB1-207ENST00000494185 HERVK_113P62684 666 aa3.36□□□□□ -1.87
LMNB1-207ENST00000494185 RGL3Q3MIN7 710 aa3.36□□□□□ -1.87
LMNB1-207ENST00000494185 CT47A1Q5JQC4 288 aaPredicted RBP3.36□□□□□ -1.87
LMNB1-207ENST00000494185 EGFLAMQ63HQ2 1017 aa3.36□□□□□ -1.87
LMNB1-207ENST00000494185 ZCCHC8Q6NZY4 707 aaKnown RBP3.36□□□□□ -1.87
LMNB1-207ENST00000494185 ARHGAP36Q6ZRI8 547 aa3.36□□□□□ -1.87
LMNB1-207ENST00000494185 C11orf74Q86VG3 221 aa3.36□□□□□ -1.87
LMNB1-207ENST00000494185 IGDCC3Q8IVU1 814 aa3.36□□□□□ -1.87
LMNB1-207ENST00000494185 DHX37Q8IY37 1157 aaKnown RBP3.36□□□□□ -1.87
LMNB1-207ENST00000494185 ZZZ3Q8IYH5 903 aa3.36□□□□□ -1.87
LMNB1-207ENST00000494185 BOCQ9BWV1 1114 aa3.36□□□□□ -1.87
LMNB1-207ENST00000494185 ZCCHC4Q9H5U6 513 aa3.36□□□□□ -1.87
LMNB1-207ENST00000494185 BARX1Q9HBU1 254 aaPredicted RBP3.36□□□□□ -1.87
LMNB1-207ENST00000494185 GCM1Q9NP62 436 aa3.36□□□□□ -1.87
LMNB1-207ENST00000494185 LUC7LQ9NQ29 371 aaKnown RBP3.36□□□□□ -1.87
LMNB1-207ENST00000494185 RIC8BQ9NVN3 520 aa3.36□□□□□ -1.87
LMNB1-207ENST00000494185 HSPBP1Q9NZL4 362 aa3.36□□□□□ -1.87
LMNB1-207ENST00000494185 RAPGEFL1Q9UHV5 662 aa3.36□□□□□ -1.87
LMNB1-207ENST00000494185 COQ6Q9Y2Z9 468 aa3.36□□□□□ -1.87
LMNB1-207ENST00000494185 C9orf118A6NHY6 69 aa3.35□□□□□ -1.87
LMNB1-207ENST00000494185 SLC27A2O14975 620 aa3.35□□□□□ -1.87
LMNB1-207ENST00000494185 CLASP2O75122 1294 aaKnown RBP3.35□□□□□ -1.87
LMNB1-207ENST00000494185 JMJD7P0C870 316 aa3.35□□□□□ -1.87
LMNB1-207ENST00000494185 FAHP16930 419 aa3.35□□□□□ -1.87
LMNB1-207ENST00000494185 KRT15P19012 456 aa3.35□□□□□ -1.87
LMNB1-207ENST00000494185 LIMS1P48059 325 aa3.35□□□□□ -1.87
LMNB1-207ENST00000494185 KCNC1P48547 511 aa3.35□□□□□ -1.87
LMNB1-207ENST00000494185 SARSP49591 514 aaKnown RBP3.35□□□□□ -1.87
LMNB1-207ENST00000494185 EPHA5P54756 1037 aa3.35□□□□□ -1.87
LMNB1-207ENST00000494185 NCKAP1LP55160 1127 aa3.35□□□□□ -1.87
LMNB1-207ENST00000494185 TUSC3Q13454 348 aa3.35□□□□□ -1.87
LMNB1-207ENST00000494185 FZD5Q13467 585 aa3.35□□□□□ -1.87
LMNB1-207ENST00000494185 ZNF460Q14592 562 aa3.35□□□□□ -1.87
LMNB1-207ENST00000494185 PAN2Q504Q3 1202 aaKnown RBP3.35□□□□□ -1.87
LMNB1-207ENST00000494185 TM4SF20Q53R12 229 aa3.35□□□□□ -1.87
LMNB1-207ENST00000494185 TMEM177Q53S58 311 aa3.35□□□□□ -1.87
LMNB1-207ENST00000494185 HABP4Q5JVS0 413 aaKnown RBP3.35□□□□□ -1.87
LMNB1-207ENST00000494185 FAM26FQ5R3K3 315 aa3.35□□□□□ -1.87
LMNB1-207ENST00000494185 BTBD8Q5XKL5 378 aa3.35□□□□□ -1.87
LMNB1-207ENST00000494185 CNNM4Q6P4Q7 775 aa3.35□□□□□ -1.87
LMNB1-207ENST00000494185 TEPPQ6URK8 271 aa3.35□□□□□ -1.87
LMNB1-207ENST00000494185 LRRTM3Q86VH5 581 aa3.35□□□□□ -1.87
LMNB1-207ENST00000494185 CISD2Q8N5K1 135 aaKnown RBP3.35□□□□□ -1.87
LMNB1-207ENST00000494185 IGSF22Q8N9C0 903 aa3.35□□□□□ -1.87
LMNB1-207ENST00000494185 PDGFDQ9GZP0 370 aaPredicted RBP3.35□□□□□ -1.87
LMNB1-207ENST00000494185 ACSS2Q9NR19 701 aa3.35□□□□□ -1.87
LMNB1-207ENST00000494185 KCNH7Q9NS40 1196 aa3.35□□□□□ -1.87
LMNB1-207ENST00000494185 SAMD15Q9P1V8 674 aa3.35□□□□□ -1.87
LMNB1-207ENST00000494185 CBLCQ9ULV8 474 aa3.35□□□□□ -1.87
LMNB1-207ENST00000494185 PRKAB1Q9Y478 270 aa3.35□□□□□ -1.87
LMNB1-207ENST00000494185 HCFC2Q9Y5Z7 792 aa3.35□□□□□ -1.87
LMNB1-207ENST00000494185 SH3D21A4FU49 640 aa3.34□□□□□ -1.87
LMNB1-207ENST00000494185 M0R2C6 588 aa3.34□□□□□ -1.87
LMNB1-207ENST00000494185 NKRFO15226 690 aaKnown RBP eCLIP3.34□□□□□ -1.87
LMNB1-207ENST00000494185 CUTAO60888 179 aa3.34□□□□□ -1.87
LMNB1-207ENST00000494185 CYP17A1P05093 508 aa3.34□□□□□ -1.87
LMNB1-207ENST00000494185 CKMP06732 381 aa3.34□□□□□ -1.87
LMNB1-207ENST00000494185 MYCLP1P12525 358 aaPredicted RBP3.34□□□□□ -1.87
LMNB1-207ENST00000494185 PDE6AP16499 860 aa3.34□□□□□ -1.87
LMNB1-207ENST00000494185 KCNA6P17658 529 aa3.34□□□□□ -1.87
LMNB1-207ENST00000494185 PTPN1P18031 435 aaKnown RBP3.34□□□□□ -1.87
LMNB1-207ENST00000494185 FBLN1P23142 703 aa3.34□□□□□ -1.87
LMNB1-207ENST00000494185 RPL13P26373 211 aaKnown RBP3.34□□□□□ -1.87
LMNB1-207ENST00000494185 SOX5P35711 763 aa3.34□□□□□ -1.87
LMNB1-207ENST00000494185 NEK4P51957 841 aa3.34□□□□□ -1.87
LMNB1-207ENST00000494185 JAG1P78504 1218 aa3.34□□□□□ -1.87
LMNB1-207ENST00000494185 LACTBP83111 547 aaPredicted RBP3.34□□□□□ -1.87
LMNB1-207ENST00000494185 SSPNQ14714 243 aa3.34□□□□□ -1.87
LMNB1-207ENST00000494185 SMAD2Q15796 467 aaKnown RBP3.34□□□□□ -1.87
LMNB1-207ENST00000494185 CFAP100Q494V2 611 aa3.34□□□□□ -1.87
LMNB1-207ENST00000494185 RNF187Q5TA31 235 aaPredicted RBP3.34□□□□□ -1.87
LMNB1-207ENST00000494185 PIK3R6Q5UE93 754 aa3.34□□□□□ -1.87
LMNB1-207ENST00000494185 ABHD17CQ6PCB6 329 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms