RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 IKBKBO14920 756 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 SARSP49591 514 aaKnown RBP7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 PPIL2Q13356 520 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 HS1BP3Q53T59 392 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 HAUS3Q68CZ6 603 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 CCDC174Q6PII3 467 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 FASTKD5Q7L8L6 764 aaKnown RBP7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 NOP9Q86U38 636 aaKnown RBP7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 RASSF8Q8NHQ8 419 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 ZKSCAN4Q969J2 545 aaPredicted RBP7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 DHX58Q96C10 678 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 CDCA5Q96FF9 252 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 GLIS2Q9BZE0 524 aaPredicted RBP7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 TMEM60Q9H2L4 133 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 LRWD1Q9UFC0 647 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 PCDHA12Q9UN75 941 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 SNCAIPQ9Y6H5 919 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 PARP14Q460N5 1801 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 MYH7BA7E2Y1 1941 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 POLR2AP24928 1970 aaKnown RBP7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 SPDYE5A6NIY4 337 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 VWA5AO00534 786 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 WNT7AO00755 349 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 ZSCAN20P17040 1043 aaPredicted RBP7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 ZNF76P36508 570 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 SSR1P43307 286 aaKnown RBP7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 HYIQ5T013 277 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 USP17L6PQ6QN14 398 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 PAGE5Q96GU1 130 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 EPSTI1Q96J88 318 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 CDK5RAP3Q96JB5 506 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 KCNMB3Q9NPA1 279 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 FBXO40Q9UH90 709 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 LOC285556D6RIA3 1793 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 ADAMTS3O15072 1205 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 STAM2O75886 525 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 CFBP00751 764 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 TPM3P06753 285 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 BCRP11274 1271 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 GRIN1Q05586 938 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 VGLL4Q14135 290 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 IL17AQ16552 155 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 LBX2Q6XYB7 198 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 ZSCAN30Q86W11 494 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 CHST13Q8NET6 341 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 RABL2BQ9UNT1 228 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 KCNH4Q9UQ05 1017 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 SCINQ9Y6U3 715 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 ZNF536O15090 1300 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 FRMPD4Q14CM0 1322 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 A0A0G2JLL6 359 aaPredicted RBP7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 OPLAHO14841 1288 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 TDP2O95551 362 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 TXKP42681 527 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 HMGCS2P54868 508 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 KCNB1Q14721 858 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 SPECC1Q5M775 1068 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 PDXDC2PQ6P474 469 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 CNNM4Q6P4Q7 775 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 PRRT2Q7Z6L0 340 aaPredicted RBP7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 TSC1Q92574 1164 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 PDLIM2Q96JY6 352 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 TEX13BQ9BXU2 312 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 WDR11Q9BZH6 1224 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 DNAJC25Q9H1X3 360 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 ACBD3Q9H3P7 528 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 TTC12Q9H892 705 aaPredicted RBP7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 CBX8Q9HC52 389 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 FBXO28Q9NVF7 368 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 PCDHA5Q9Y5H7 936 aa7.47□□□□□ -1.21
FNDC3B-212ENST00000494000 RPTORQ8N122 1335 aa7.46□□□□□ -1.21
FNDC3B-212ENST00000494000 GOLGA6L6A8MZA4 724 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 B4DLN1 442 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 ADM5C9JUS6 153 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 NDUFV2P19404 249 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 GNALP38405 381 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 TECP42680 631 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 INHBEP58166 350 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 DPYDQ12882 1025 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 PSMD2Q13200 908 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 MORC3Q14149 939 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 ZKSCAN8Q15776 578 aaPredicted RBP7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 SARM1Q6SZW1 724 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 RNF214Q8ND24 703 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 NEK9Q8TD19 979 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 KBTBD4Q9NVX7 518 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 FEZ2Q9UHY8 353 aaPredicted RBP7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 OTOFQ9HC10 1997 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 SLC37A4O43826 429 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 RNASEH2AO75792 299 aaKnown RBP7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 ALAS1P13196 640 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 OSBPP22059 807 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 PAX7P23759 505 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 SATB1Q01826 763 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 PNOCQ13519 176 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 STIM1Q13586 685 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 IQCB1Q15051 598 aa7.46□□□□□ -1.22
FNDC3B-212ENST00000494000 TAF3Q5VWG9 929 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms