RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 PRMT2P55345 433 aa21.78■■□□□ 1.08
USP39-218ENST00000493829 TNFAIP2Q03169 654 aa21.78■■□□□ 1.08
USP39-218ENST00000493829 PDIA5Q14554 519 aa21.78■■□□□ 1.08
USP39-218ENST00000493829 CELF3Q5SZQ8 465 aaKnown RBP21.78■■□□□ 1.08
USP39-218ENST00000493829 KRT79Q5XKE5 535 aa21.78■■□□□ 1.08
USP39-218ENST00000493829 MMTAG2Q9BU76 263 aaKnown RBP21.78■■□□□ 1.08
USP39-218ENST00000493829 A0A087X0B3 334 aa21.77■■□□□ 1.08
USP39-218ENST00000493829 CCT6AP40227 531 aaKnown RBP21.77■■□□□ 1.08
USP39-218ENST00000493829 CTCFP49711 727 aaPredicted RBP21.77■■□□□ 1.08
USP39-218ENST00000493829 ACTR2P61160 394 aa21.77■■□□□ 1.08
USP39-218ENST00000493829 METTL7BQ6UX53 244 aa21.77■■□□□ 1.08
USP39-218ENST00000493829 B3GNT9Q6UX72 402 aa21.77■■□□□ 1.08
USP39-218ENST00000493829 GIMAP8Q8ND71 665 aaPredicted RBP21.77■■□□□ 1.08
USP39-218ENST00000493829 SLAIN1Q8ND83 568 aa21.77■■□□□ 1.08
USP39-218ENST00000493829 ERMNQ8TAM6 284 aa21.77■■□□□ 1.08
USP39-218ENST00000493829 SH3TC2Q8TF17 1288 aa21.77■■□□□ 1.08
USP39-218ENST00000493829 SPATA33Q96N06 139 aa21.77■■□□□ 1.08
USP39-218ENST00000493829 DISC1Q9NRI5 854 aa21.77■■□□□ 1.08
USP39-218ENST00000493829 POTEB3A0JP26 581 aa21.76■■□□□ 1.07
USP39-218ENST00000493829 WDR64B1ANS9 1081 aa21.76■■□□□ 1.07
USP39-218ENST00000493829 GH1P01241 217 aa21.76■■□□□ 1.07
USP39-218ENST00000493829 INHAP05111 366 aa21.76■■□□□ 1.07
USP39-218ENST00000493829 CCND3P30281 292 aaPredicted RBP21.76■■□□□ 1.07
USP39-218ENST00000493829 GRK4P32298 578 aa21.76■■□□□ 1.07
USP39-218ENST00000493829 ARHGAP1Q07960 439 aa21.76■■□□□ 1.07
USP39-218ENST00000493829 DUSP28Q4G0W2 176 aa21.76■■□□□ 1.07
USP39-218ENST00000493829 IQSEC1Q6DN90 963 aa21.76■■□□□ 1.07
USP39-218ENST00000493829 ZNF746Q6NUN9 644 aaPredicted RBP21.76■■□□□ 1.07
USP39-218ENST00000493829 POTEBQ6S5H4 581 aa21.76■■□□□ 1.07
USP39-218ENST00000493829 BANK1Q8NDB2 785 aa21.76■■□□□ 1.07
USP39-218ENST00000493829 DYDC2Q96IM9 177 aa21.76■■□□□ 1.07
USP39-218ENST00000493829 EIF2AK1Q9BQI3 630 aaKnown RBP21.76■■□□□ 1.07
USP39-218ENST00000493829 RGL1Q9NZL6 768 aa21.76■■□□□ 1.07
USP39-218ENST00000493829 KCNH3Q9ULD8 1083 aa21.76■■□□□ 1.07
USP39-218ENST00000493829 PTPN22Q9Y2R2 807 aa21.76■■□□□ 1.07
USP39-218ENST00000493829 NOP56O00567 594 aaKnown RBP21.75■■□□□ 1.07
USP39-218ENST00000493829 MED24O75448 989 aa21.75■■□□□ 1.07
USP39-218ENST00000493829 NR1I2O75469 434 aa21.75■■□□□ 1.07
USP39-218ENST00000493829 JAK3P52333 1124 aa21.75■■□□□ 1.07
USP39-218ENST00000493829 CTTNQ14247 550 aaKnown RBP21.75■■□□□ 1.07
USP39-218ENST00000493829 HAUS3Q68CZ6 603 aa21.75■■□□□ 1.07
USP39-218ENST00000493829 OR6J1Q8NGC5 347 aa21.75■■□□□ 1.07
USP39-218ENST00000493829 PXYLP1Q8TE99 480 aa21.75■■□□□ 1.07
USP39-218ENST00000493829 DHX58Q96C10 678 aa21.75■■□□□ 1.07
USP39-218ENST00000493829 CDK5RAP3Q96JB5 506 aa21.75■■□□□ 1.07
USP39-218ENST00000493829 FAM184BQ9ULE4 1060 aa21.75■■□□□ 1.07
USP39-218ENST00000493829 POTEFA5A3E0 1075 aa21.75■■□□□ 1.07
USP39-218ENST00000493829 AKR1A1P14550 325 aa21.75■■□□□ 1.07
USP39-218ENST00000493829 SYKP43405 635 aa21.75■■□□□ 1.07
USP39-218ENST00000493829 ECM1Q16610 540 aa21.75■■□□□ 1.07
USP39-218ENST00000493829 HSDL1Q3SXM5 330 aa21.75■■□□□ 1.07
USP39-218ENST00000493829 POTEGQ6S5H5 508 aa21.75■■□□□ 1.07
USP39-218ENST00000493829 HPSEQ9Y251 543 aa21.75■■□□□ 1.07
USP39-218ENST00000493829 A0A087WWV3 80 aa21.74■■□□□ 1.07
USP39-218ENST00000493829 POLR2DO15514 142 aaKnown RBP21.74■■□□□ 1.07
USP39-218ENST00000493829 MYCP01106 439 aaPredicted RBP21.74■■□□□ 1.07
USP39-218ENST00000493829 PLCG1P19174 1290 aa21.74■■□□□ 1.07
USP39-218ENST00000493829 PTMSP20962 102 aa21.74■■□□□ 1.07
USP39-218ENST00000493829 SFNP31947 248 aa21.74■■□□□ 1.07
USP39-218ENST00000493829 CENPFP49454 3210 aa21.74■■□□□ 1.07
USP39-218ENST00000493829 FAM160A1Q05DH4 1040 aa21.74■■□□□ 1.07
USP39-218ENST00000493829 GRB10Q13322 594 aa21.74■■□□□ 1.07
USP39-218ENST00000493829 UGCGQ16739 394 aa21.74■■□□□ 1.07
USP39-218ENST00000493829 TLK2Q86UE8 772 aa21.74■■□□□ 1.07
USP39-218ENST00000493829 SMAP1Q8IYB5 467 aaPredicted RBP21.74■■□□□ 1.07
USP39-218ENST00000493829 CALML4Q96GE6 196 aa21.74■■□□□ 1.07
USP39-218ENST00000493829 PNMA5Q96PV4 448 aa21.74■■□□□ 1.07
USP39-218ENST00000493829 CCSER1Q9C0I3 900 aa21.74■■□□□ 1.07
USP39-218ENST00000493829 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.73■■□□□ 1.07
USP39-218ENST00000493829 BACH1O14867 736 aa21.73■■□□□ 1.07
USP39-218ENST00000493829 DYNC1LI2O43237 492 aaPredicted RBP21.73■■□□□ 1.07
USP39-218ENST00000493829 EPHA7Q15375 998 aa21.73■■□□□ 1.07
USP39-218ENST00000493829 MIS18BP1Q6P0N0 1132 aa21.73■■□□□ 1.07
USP39-218ENST00000493829 TRMT1LQ7Z2T5 733 aaKnown RBP21.73■■□□□ 1.07
USP39-218ENST00000493829 CATSPER3Q86XQ3 398 aa21.73■■□□□ 1.07
USP39-218ENST00000493829 TPH2Q8IWU9 490 aa21.73■■□□□ 1.07
USP39-218ENST00000493829 AFG1LQ8WV93 481 aa21.73■■□□□ 1.07
USP39-218ENST00000493829 GPR20Q99678 358 aa21.73■■□□□ 1.07
USP39-218ENST00000493829 LXNQ9BS40 222 aa21.73■■□□□ 1.07
USP39-218ENST00000493829 DACT1Q9NYF0 836 aa21.73■■□□□ 1.07
USP39-218ENST00000493829 CCDC39Q9UFE4 941 aa21.73■■□□□ 1.07
USP39-218ENST00000493829 NRBP1Q9UHY1 535 aa21.73■■□□□ 1.07
USP39-218ENST00000493829 PCDHA10Q9Y5I2 948 aa21.73■■□□□ 1.07
USP39-218ENST00000493829 KDM3AQ9Y4C1 1321 aa21.73■■□□□ 1.07
USP39-218ENST00000493829 MBD3O95983 291 aa21.72■■□□□ 1.07
USP39-218ENST00000493829 PSAPP07602 524 aa21.72■■□□□ 1.07
USP39-218ENST00000493829 SUPT20HL2P0C7V6 817 aa21.72■■□□□ 1.07
USP39-218ENST00000493829 TCF7P36402 384 aaPredicted RBP21.72■■□□□ 1.07
USP39-218ENST00000493829 STAT6P42226 847 aa21.72■■□□□ 1.07
USP39-218ENST00000493829 IRX5P78411 483 aaPredicted RBP21.72■■□□□ 1.07
USP39-218ENST00000493829 LAMC2Q13753 1193 aa21.72■■□□□ 1.07
USP39-218ENST00000493829 UTP14CQ5TAP6 766 aaKnown RBP21.72■■□□□ 1.07
USP39-218ENST00000493829 CTU1Q7Z7A3 348 aaKnown RBP21.72■■□□□ 1.07
USP39-218ENST00000493829 CCDC60Q8IWA6 550 aaPredicted RBP21.72■■□□□ 1.07
USP39-218ENST00000493829 FMR1NBQ8N0W7 255 aaPredicted RBP21.72■■□□□ 1.07
USP39-218ENST00000493829 DDX19AQ9NUU7 478 aaKnown RBP21.72■■□□□ 1.07
USP39-218ENST00000493829 WRAP73Q9P2S5 460 aaPredicted RBP21.72■■□□□ 1.07
USP39-218ENST00000493829 GABBR1Q9UBS5 961 aa21.72■■□□□ 1.07
USP39-218ENST00000493829 GNEQ9Y223 722 aaKnown RBP21.72■■□□□ 1.07
USP39-218ENST00000493829 GSTTP1A0A1W2PQM5 241 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms