RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 Q8TCH9 128 aa6.92□□□□□ -1.3
SMC4-223ENST00000493695 MEGF9Q9H1U4 602 aa6.92□□□□□ -1.3
SMC4-223ENST00000493695 ST7Q9NRC1 585 aa6.92□□□□□ -1.3
SMC4-223ENST00000493695 MSCO60682 206 aa6.91□□□□□ -1.3
SMC4-223ENST00000493695 ENO2P09104 434 aaPredicted RBP6.91□□□□□ -1.3
SMC4-223ENST00000493695 GNL2Q13823 731 aaKnown RBP6.91□□□□□ -1.3
SMC4-223ENST00000493695 PAN2Q504Q3 1202 aaKnown RBP6.91□□□□□ -1.3
SMC4-223ENST00000493695 DTX3Q8N9I9 347 aa6.91□□□□□ -1.3
SMC4-223ENST00000493695 C1orf159Q96HA4 380 aa6.91□□□□□ -1.3
SMC4-223ENST00000493695 WWC2-AS2Q96NR7 200 aa6.91□□□□□ -1.3
SMC4-223ENST00000493695 ADOQ96SZ5 270 aa6.91□□□□□ -1.3
SMC4-223ENST00000493695 CSRNP2Q9H175 543 aa6.91□□□□□ -1.3
SMC4-223ENST00000493695 GPR27Q9NS67 375 aa6.91□□□□□ -1.3
SMC4-223ENST00000493695 KLHL18O94889 574 aa6.9□□□□□ -1.3
SMC4-223ENST00000493695 CNOT4O95628 575 aaKnown RBP6.9□□□□□ -1.3
SMC4-223ENST00000493695 ERCC5P28715 1186 aaPredicted RBP6.9□□□□□ -1.3
SMC4-223ENST00000493695 MAP4K2Q12851 820 aa6.9□□□□□ -1.3
SMC4-223ENST00000493695 KLF10Q13118 480 aa6.9□□□□□ -1.3
SMC4-223ENST00000493695 PRKD1Q15139 912 aaPredicted RBP6.9□□□□□ -1.3
SMC4-223ENST00000493695 NRN1LQ496H8 165 aa6.9□□□□□ -1.3
SMC4-223ENST00000493695 OTOP3Q7RTS5 596 aa6.9□□□□□ -1.3
SMC4-223ENST00000493695 TACO1Q9BSH4 297 aaKnown RBP6.9□□□□□ -1.3
SMC4-223ENST00000493695 SLITRK6Q9H5Y7 841 aa6.9□□□□□ -1.3
SMC4-223ENST00000493695 NPFFR2Q9Y5X5 522 aa6.9□□□□□ -1.3
SMC4-223ENST00000493695 H0Y858 1186 aa6.89□□□□□ -1.31
SMC4-223ENST00000493695 COL6A1P12109 1028 aa6.89□□□□□ -1.31
SMC4-223ENST00000493695 FAHP16930 419 aa6.89□□□□□ -1.31
SMC4-223ENST00000493695 GRK2P25098 689 aa6.89□□□□□ -1.31
SMC4-223ENST00000493695 GRK3P35626 688 aa6.89□□□□□ -1.31
SMC4-223ENST00000493695 PFKPQ01813 784 aa6.89□□□□□ -1.31
SMC4-223ENST00000493695 SLC10A6Q3KNW5 377 aa6.89□□□□□ -1.31
SMC4-223ENST00000493695 CRB2Q5IJ48 1285 aa6.89□□□□□ -1.31
SMC4-223ENST00000493695 TCTN3Q6NUS6 607 aa6.89□□□□□ -1.31
SMC4-223ENST00000493695 TAX1BP1Q86VP1 789 aa6.89□□□□□ -1.31
SMC4-223ENST00000493695 PROSER1Q86XN7 944 aa6.89□□□□□ -1.31
SMC4-223ENST00000493695 TTLL11Q8NHH1 800 aa6.89□□□□□ -1.31
SMC4-223ENST00000493695 EPN3Q9H201 632 aa6.89□□□□□ -1.31
SMC4-223ENST00000493695 KIAA1522Q9P206 1035 aaPredicted RBP6.89□□□□□ -1.31
SMC4-223ENST00000493695 ING1Q9UK53 422 aaPredicted RBP6.89□□□□□ -1.31
SMC4-223ENST00000493695 ZFR2Q9UPR6 939 aaKnown RBP6.89□□□□□ -1.31
SMC4-223ENST00000493695 A0A1W2PQU0 124 aa6.88□□□□□ -1.31
SMC4-223ENST00000493695 NPIPB8E9PQR5 432 aa6.88□□□□□ -1.31
SMC4-223ENST00000493695 FOXS1O43638 330 aa6.88□□□□□ -1.31
SMC4-223ENST00000493695 KNG1P01042 644 aa6.88□□□□□ -1.31
SMC4-223ENST00000493695 HSP90AA2PQ14568 343 aaPredicted RBP6.88□□□□□ -1.31
SMC4-223ENST00000493695 R3HDM1Q15032 1099 aaKnown RBP6.88□□□□□ -1.31
SMC4-223ENST00000493695 KCNT2Q6UVM3 1135 aa6.88□□□□□ -1.31
SMC4-223ENST00000493695 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.88□□□□□ -1.31
SMC4-223ENST00000493695 PCED1AQ9H1Q7 454 aa6.88□□□□□ -1.31
SMC4-223ENST00000493695 CDIP1Q9H305 208 aa6.88□□□□□ -1.31
SMC4-223ENST00000493695 SEC61A2Q9H9S3 476 aa6.88□□□□□ -1.31
SMC4-223ENST00000493695 DSEQ9UL01 958 aa6.88□□□□□ -1.31
SMC4-223ENST00000493695 NKRFO15226 690 aaKnown RBP eCLIP6.87□□□□□ -1.31
SMC4-223ENST00000493695 PRODHO43272 600 aa6.87□□□□□ -1.31
SMC4-223ENST00000493695 DLX3O60479 287 aa6.87□□□□□ -1.31
SMC4-223ENST00000493695 RRADP55042 308 aa6.87□□□□□ -1.31
SMC4-223ENST00000493695 USP10Q14694 798 aaKnown RBP6.87□□□□□ -1.31
SMC4-223ENST00000493695 KIZQ2M2Z5 673 aa6.87□□□□□ -1.31
SMC4-223ENST00000493695 CD276Q5ZPR3 534 aa6.87□□□□□ -1.31
SMC4-223ENST00000493695 ZNF408Q9H9D4 720 aa6.87□□□□□ -1.31
SMC4-223ENST00000493695 PTPN22Q9Y2R2 807 aa6.87□□□□□ -1.31
SMC4-223ENST00000493695 TESMINQ9Y4I5 508 aa6.87□□□□□ -1.31
SMC4-223ENST00000493695 SLC4A7Q9Y6M7 1214 aa6.87□□□□□ -1.31
SMC4-223ENST00000493695 CHGBP05060 677 aa6.86□□□□□ -1.31
SMC4-223ENST00000493695 ZNF888P0CJ79 500 aaPredicted RBP6.86□□□□□ -1.31
SMC4-223ENST00000493695 CSF2RBP32927 897 aa6.86□□□□□ -1.31
SMC4-223ENST00000493695 RAC3P60763 192 aa6.86□□□□□ -1.31
SMC4-223ENST00000493695 FHL2Q14192 279 aa6.86□□□□□ -1.31
SMC4-223ENST00000493695 NEIL1Q96FI4 390 aaPredicted RBP6.86□□□□□ -1.31
SMC4-223ENST00000493695 AJUBAQ96IF1 538 aa6.86□□□□□ -1.31
SMC4-223ENST00000493695 C12orf65Q9H3J6 166 aaKnown RBP6.86□□□□□ -1.31
SMC4-223ENST00000493695 HSPBP1Q9NZL4 362 aa6.86□□□□□ -1.31
SMC4-223ENST00000493695 ESYT3A0FGR9 886 aa6.85□□□□□ -1.31
SMC4-223ENST00000493695 USP39Q53GS9 565 aaKnown RBP6.85□□□□□ -1.31
SMC4-223ENST00000493695 LBX2Q6XYB7 198 aa6.85□□□□□ -1.31
SMC4-223ENST00000493695 EP400NLQ6ZTU2 488 aa6.85□□□□□ -1.31
SMC4-223ENST00000493695 KCTD1Q719H9 257 aa6.85□□□□□ -1.31
SMC4-223ENST00000493695 UHMK1Q8TAS1 419 aaKnown RBP6.85□□□□□ -1.31
SMC4-223ENST00000493695 DCAF4Q8WV16 495 aa6.85□□□□□ -1.31
SMC4-223ENST00000493695 HNRNPLLQ8WVV9 542 aaKnown RBP6.85□□□□□ -1.31
SMC4-223ENST00000493695 AARSD1Q9BTE6 412 aaKnown RBP6.85□□□□□ -1.31
SMC4-223ENST00000493695 CARD11Q9BXL7 1154 aa6.85□□□□□ -1.31
SMC4-223ENST00000493695 SLC39A2Q9NP94 309 aa6.85□□□□□ -1.31
SMC4-223ENST00000493695 KCND1Q9NSA2 647 aa6.85□□□□□ -1.31
SMC4-223ENST00000493695 BLACEA4D250 179 aa6.84□□□□□ -1.31
SMC4-223ENST00000493695 UNCXA6NJT0 531 aa6.84□□□□□ -1.31
SMC4-223ENST00000493695 FAM47E-STBD1D6RA91 191 aa6.84□□□□□ -1.31
SMC4-223ENST00000493695 SOD2P04179 222 aa6.84□□□□□ -1.31
SMC4-223ENST00000493695 COMTP21964 271 aa6.84□□□□□ -1.31
SMC4-223ENST00000493695 FOXE3Q13461 319 aa6.84□□□□□ -1.31
SMC4-223ENST00000493695 RSPO2Q6UXX9 243 aaPredicted RBP6.84□□□□□ -1.31
SMC4-223ENST00000493695 REXO1L1PQ8IX06 675 aa6.84□□□□□ -1.31
SMC4-223ENST00000493695 ALG1Q9BT22 464 aa6.84□□□□□ -1.31
SMC4-223ENST00000493695 CD244Q9BZW8 370 aa6.84□□□□□ -1.31
SMC4-223ENST00000493695 ARHGAP28Q9P2N2 729 aa6.84□□□□□ -1.31
SMC4-223ENST00000493695 ZNF839A8K0R7 811 aa6.83□□□□□ -1.32
SMC4-223ENST00000493695 CDC14BO60729 498 aa6.83□□□□□ -1.32
SMC4-223ENST00000493695 TGFB2P61812 414 aa6.83□□□□□ -1.32
SMC4-223ENST00000493695 IFRD2Q12894 506 aaPredicted RBP6.83□□□□□ -1.32
SMC4-223ENST00000493695 NSMFQ6X4W1 530 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms