RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 GRID2IPA4D2P6 1211 aa17.1■□□□□ 0.33
CACUL1-206ENST00000493518 KRIT1O00522 736 aa17.1■□□□□ 0.33
CACUL1-206ENST00000493518 ACTN3Q08043 901 aaPredicted RBP17.1■□□□□ 0.33
CACUL1-206ENST00000493518 PWP2Q15269 919 aaKnown RBP17.1■□□□□ 0.33
CACUL1-206ENST00000493518 DAAM2Q86T65 1068 aa17.1■□□□□ 0.33
CACUL1-206ENST00000493518 ADGRF4Q8IZF3 695 aa17.1■□□□□ 0.33
CACUL1-206ENST00000493518 PSTPIP2Q9H939 334 aa17.1■□□□□ 0.33
CACUL1-206ENST00000493518 ATP6V0A2Q9Y487 856 aa17.1■□□□□ 0.33
CACUL1-206ENST00000493518 A0A1W2PQJ5 194 aa17.09■□□□□ 0.33
CACUL1-206ENST00000493518 DCDC2CA8MYV0 355 aa17.09■□□□□ 0.33
CACUL1-206ENST00000493518 GFPT2O94808 682 aa17.09■□□□□ 0.33
CACUL1-206ENST00000493518 SERPING1P05155 500 aa17.09■□□□□ 0.33
CACUL1-206ENST00000493518 HNRNPH1P31943 449 aaKnown RBP17.09■□□□□ 0.33
CACUL1-206ENST00000493518 CASP4P49662 377 aa17.09■□□□□ 0.33
CACUL1-206ENST00000493518 ERVK-9P63128 1117 aa17.09■□□□□ 0.33
CACUL1-206ENST00000493518 IFFO1Q0D2I5 559 aa17.09■□□□□ 0.33
CACUL1-206ENST00000493518 CEP57Q86XR8 500 aa17.09■□□□□ 0.33
CACUL1-206ENST00000493518 MDM1Q8TC05 714 aa17.09■□□□□ 0.33
CACUL1-206ENST00000493518 RPGRQ92834 1020 aaKnown RBP17.09■□□□□ 0.33
CACUL1-206ENST00000493518 LDHCP07864 332 aa17.09■□□□□ 0.33
CACUL1-206ENST00000493518 ZNF804AQ7Z570 1209 aa17.09■□□□□ 0.33
CACUL1-206ENST00000493518 ZNF287Q9HBT7 754 aa17.09■□□□□ 0.33
CACUL1-206ENST00000493518 LRRC4CQ9HCJ2 640 aa17.09■□□□□ 0.33
CACUL1-206ENST00000493518 LUC7LQ9NQ29 371 aaKnown RBP17.09■□□□□ 0.33
CACUL1-206ENST00000493518 NOVA2Q9UNW9 492 aaKnown RBP17.09■□□□□ 0.33
CACUL1-206ENST00000493518 USP8P40818 1118 aa17.09■□□□□ 0.33
CACUL1-206ENST00000493518 IRX3P78415 501 aaPredicted RBP17.09■□□□□ 0.33
CACUL1-206ENST00000493518 GPSM2P81274 684 aa17.09■□□□□ 0.33
CACUL1-206ENST00000493518 ARHGAP44Q17R89 818 aa17.09■□□□□ 0.33
CACUL1-206ENST00000493518 GALNT17Q6IS24 598 aa17.09■□□□□ 0.33
CACUL1-206ENST00000493518 PEX26Q7Z412 305 aa17.09■□□□□ 0.33
CACUL1-206ENST00000493518 TRIM51Q9BSJ1 452 aa17.09■□□□□ 0.33
CACUL1-206ENST00000493518 EFCC1Q9HA90 598 aa17.09■□□□□ 0.33
CACUL1-206ENST00000493518 CD248Q9HCU0 757 aa17.09■□□□□ 0.33
CACUL1-206ENST00000493518 ATP8A1Q9Y2Q0 1164 aa17.09■□□□□ 0.33
CACUL1-206ENST00000493518 HOXA13P31271 388 aaPredicted RBP17.08■□□□□ 0.33
CACUL1-206ENST00000493518 LRRC63Q05C16 580 aa17.08■□□□□ 0.33
CACUL1-206ENST00000493518 DOK7Q18PE1 504 aa17.08■□□□□ 0.33
CACUL1-206ENST00000493518 PIGOQ8TEQ8 1089 aa17.08■□□□□ 0.33
CACUL1-206ENST00000493518 ARHGEF1Q92888 912 aaKnown RBP17.08■□□□□ 0.33
CACUL1-206ENST00000493518 NEUROG2Q9H2A3 272 aa17.08■□□□□ 0.33
CACUL1-206ENST00000493518 PKD2L1Q9P0L9 805 aa17.08■□□□□ 0.33
CACUL1-206ENST00000493518 HDAC9Q9UKV0 1011 aa17.08■□□□□ 0.33
CACUL1-206ENST00000493518 BCL9LQ86UU0 1499 aa17.08■□□□□ 0.32
CACUL1-206ENST00000493518 CETN3O15182 167 aa17.08■□□□□ 0.32
CACUL1-206ENST00000493518 TTI1O43156 1089 aa17.08■□□□□ 0.32
CACUL1-206ENST00000493518 PPP1R11O60927 126 aaPredicted RBP17.08■□□□□ 0.32
CACUL1-206ENST00000493518 LRRN2O75325 713 aa17.08■□□□□ 0.32
CACUL1-206ENST00000493518 RBM5P52756 815 aaKnown RBP eCLIP17.08■□□□□ 0.32
CACUL1-206ENST00000493518 KRT71Q3SY84 523 aa17.08■□□□□ 0.32
CACUL1-206ENST00000493518 ALKBH5Q6P6C2 394 aaKnown RBP17.08■□□□□ 0.32
CACUL1-206ENST00000493518 ZNF571Q7Z3V5 609 aaPredicted RBP17.08■□□□□ 0.32
CACUL1-206ENST00000493518 CCDC65Q8IXS2 484 aa17.08■□□□□ 0.32
CACUL1-206ENST00000493518 HAS1Q92839 578 aa17.08■□□□□ 0.32
CACUL1-206ENST00000493518 MTMR9Q96QG7 549 aa17.08■□□□□ 0.32
CACUL1-206ENST00000493518 CCT8L2Q96SF2 557 aa17.08■□□□□ 0.32
CACUL1-206ENST00000493518 SPZ1Q9BXG8 430 aa17.08■□□□□ 0.32
CACUL1-206ENST00000493518 STRCP1A6NGW2 1772 aa17.08■□□□□ 0.32
CACUL1-206ENST00000493518 GOLGA6L7A0A1B0GV03 622 aa17.08■□□□□ 0.32
CACUL1-206ENST00000493518 GCNT3O95395 438 aa17.08■□□□□ 0.32
CACUL1-206ENST00000493518 TNNC1P63316 161 aa17.08■□□□□ 0.32
CACUL1-206ENST00000493518 NEDD1Q8NHV4 660 aa17.08■□□□□ 0.32
CACUL1-206ENST00000493518 SCFD1Q8WVM8 642 aa17.08■□□□□ 0.32
CACUL1-206ENST00000493518 RTFDC1Q9BY42 306 aaPredicted RBP17.08■□□□□ 0.32
CACUL1-206ENST00000493518 CD209Q9NNX6 404 aa17.08■□□□□ 0.32
CACUL1-206ENST00000493518 CEP72Q9P209 647 aa17.08■□□□□ 0.32
CACUL1-206ENST00000493518 FBXL5Q9UKA1 691 aa17.08■□□□□ 0.32
CACUL1-206ENST00000493518 CACNA1SQ13698 1873 aa17.07■□□□□ 0.32
CACUL1-206ENST00000493518 MYH14Q7Z406 1995 aaKnown RBP17.07■□□□□ 0.32
CACUL1-206ENST00000493518 G3V3G9 751 aa17.07■□□□□ 0.32
CACUL1-206ENST00000493518 SART1O43290 800 aaKnown RBP17.07■□□□□ 0.32
CACUL1-206ENST00000493518 ECM2O94769 699 aaPredicted RBP17.07■□□□□ 0.32
CACUL1-206ENST00000493518 MYBP10242 640 aa17.07■□□□□ 0.32
CACUL1-206ENST00000493518 SLCO1A2P46721 670 aa17.07■□□□□ 0.32
CACUL1-206ENST00000493518 GSTO1P78417 241 aa17.07■□□□□ 0.32
CACUL1-206ENST00000493518 DHX9Q08211 1270 aaKnown RBP17.07■□□□□ 0.32
CACUL1-206ENST00000493518 SF3B2Q13435 895 aaKnown RBP17.07■□□□□ 0.32
CACUL1-206ENST00000493518 SLC18A3Q16572 532 aa17.07■□□□□ 0.32
CACUL1-206ENST00000493518 DCAF8Q5TAQ9 597 aa17.07■□□□□ 0.32
CACUL1-206ENST00000493518 CLEC4GQ6UXB4 293 aa17.07■□□□□ 0.32
CACUL1-206ENST00000493518 SFR1Q86XK3 245 aa17.07■□□□□ 0.32
CACUL1-206ENST00000493518 DAGLBQ8NCG7 672 aa17.07■□□□□ 0.32
CACUL1-206ENST00000493518 ELMO3Q96BJ8 720 aa17.07■□□□□ 0.32
CACUL1-206ENST00000493518 OSGEPQ9NPF4 335 aa17.07■□□□□ 0.32
CACUL1-206ENST00000493518 GGT7Q9UJ14 662 aa17.07■□□□□ 0.32
CACUL1-206ENST00000493518 CCNL1Q9UK58 526 aaPredicted RBP17.07■□□□□ 0.32
CACUL1-206ENST00000493518 TIAM2Q8IVF5 1701 aa17.07■□□□□ 0.32
CACUL1-206ENST00000493518 GCOM1H8Y6P7 765 aaPredicted RBP17.07■□□□□ 0.32
CACUL1-206ENST00000493518 EDIL3O43854 480 aa17.07■□□□□ 0.32
CACUL1-206ENST00000493518 MYZAPP0CAP1 466 aa17.07■□□□□ 0.32
CACUL1-206ENST00000493518 MMS22LQ6ZRQ5 1243 aa17.07■□□□□ 0.32
CACUL1-206ENST00000493518 SPICE1Q8N0Z3 855 aa17.07■□□□□ 0.32
CACUL1-206ENST00000493518 ZNF473Q8WTR7 871 aaKnown RBP17.07■□□□□ 0.32
CACUL1-206ENST00000493518 DNAJC19Q96DA6 116 aa17.07■□□□□ 0.32
CACUL1-206ENST00000493518 SCLT1Q96NL6 688 aa17.07■□□□□ 0.32
CACUL1-206ENST00000493518 SELENOSQ9BQE4 189 aa17.07■□□□□ 0.32
CACUL1-206ENST00000493518 SH2D3AQ9BRG2 576 aa17.07■□□□□ 0.32
CACUL1-206ENST00000493518 JMJD4Q9H9V9 463 aa17.07■□□□□ 0.32
CACUL1-206ENST00000493518 STK17AQ9UEE5 414 aa17.07■□□□□ 0.32
CACUL1-206ENST00000493518 ARMCX3Q9UH62 379 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms