RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 VAV3Q9UKW4 847 aa13.01□□□□□ -0.33
LSM2-214ENST00000493387 PCDHA10Q9Y5I2 948 aa13.01□□□□□ -0.33
LSM2-214ENST00000493387 ELP1O95163 1332 aa13.01□□□□□ -0.33
LSM2-214ENST00000493387 VWA3AA6NCI4 1184 aa13□□□□□ -0.33
LSM2-214ENST00000493387 A6NJR5 290 aa13□□□□□ -0.33
LSM2-214ENST00000493387 DKC1O60832 514 aaKnown RBP eCLIP13□□□□□ -0.33
LSM2-214ENST00000493387 CUTAO60888 179 aa13□□□□□ -0.33
LSM2-214ENST00000493387 ATG7O95352 703 aa13□□□□□ -0.33
LSM2-214ENST00000493387 PSAPP07602 524 aa13□□□□□ -0.33
LSM2-214ENST00000493387 GJB1P08034 283 aa13□□□□□ -0.33
LSM2-214ENST00000493387 CST5P28325 142 aaPredicted RBP13□□□□□ -0.33
LSM2-214ENST00000493387 MARCKSP29966 332 aaPredicted RBP13□□□□□ -0.33
LSM2-214ENST00000493387 ME1P48163 572 aa13□□□□□ -0.33
LSM2-214ENST00000493387 ACTR2P61160 394 aa13□□□□□ -0.33
LSM2-214ENST00000493387 EPHA7Q15375 998 aa13□□□□□ -0.33
LSM2-214ENST00000493387 DGKDQ16760 1214 aa13□□□□□ -0.33
LSM2-214ENST00000493387 RNF180Q86T96 592 aa13□□□□□ -0.33
LSM2-214ENST00000493387 IGSF22Q8N9C0 903 aa13□□□□□ -0.33
LSM2-214ENST00000493387 PCSK9Q8NBP7 692 aaKnown RBP13□□□□□ -0.33
LSM2-214ENST00000493387 NEK9Q8TD19 979 aa13□□□□□ -0.33
LSM2-214ENST00000493387 AFG1LQ8WV93 481 aa13□□□□□ -0.33
LSM2-214ENST00000493387 GJA10Q969M2 543 aa13□□□□□ -0.33
LSM2-214ENST00000493387 UIMC1Q96RL1 719 aa13□□□□□ -0.33
LSM2-214ENST00000493387 GPR20Q99678 358 aa13□□□□□ -0.33
LSM2-214ENST00000493387 TMEM106CQ9BVX2 250 aa13□□□□□ -0.33
LSM2-214ENST00000493387 DISC1Q9NRI5 854 aa13□□□□□ -0.33
LSM2-214ENST00000493387 LRWD1Q9UFC0 647 aa13□□□□□ -0.33
LSM2-214ENST00000493387 FBXO2Q9UK22 296 aaPredicted RBP13□□□□□ -0.33
LSM2-214ENST00000493387 SAMM50Q9Y512 469 aa13□□□□□ -0.33
LSM2-214ENST00000493387 ADCY6O43306 1168 aa12.99□□□□□ -0.33
LSM2-214ENST00000493387 CHMP2AO43633 222 aa12.99□□□□□ -0.33
LSM2-214ENST00000493387 CCNE2O96020 404 aa12.99□□□□□ -0.33
LSM2-214ENST00000493387 C6orf222P0C671 652 aaPredicted RBP12.99□□□□□ -0.33
LSM2-214ENST00000493387 HOXD8P13378 290 aaPredicted RBP12.99□□□□□ -0.33
LSM2-214ENST00000493387 SP4Q02446 784 aa12.99□□□□□ -0.33
LSM2-214ENST00000493387 SPIRE1Q08AE8 756 aa12.99□□□□□ -0.33
LSM2-214ENST00000493387 MTFR1Q15390 333 aa12.99□□□□□ -0.33
LSM2-214ENST00000493387 FSCN1Q16658 493 aaKnown RBP12.99□□□□□ -0.33
LSM2-214ENST00000493387 HSDL1Q3SXM5 330 aa12.99□□□□□ -0.33
LSM2-214ENST00000493387 TMEM63BQ5T3F8 832 aa12.99□□□□□ -0.33
LSM2-214ENST00000493387 GJC2Q5T442 439 aaPredicted RBP12.99□□□□□ -0.33
LSM2-214ENST00000493387 FAM160B1Q5W0V3 765 aa12.99□□□□□ -0.33
LSM2-214ENST00000493387 KRT79Q5XKE5 535 aa12.99□□□□□ -0.33
LSM2-214ENST00000493387 HAUS3Q68CZ6 603 aa12.99□□□□□ -0.33
LSM2-214ENST00000493387 LHX8Q68G74 356 aa12.99□□□□□ -0.33
LSM2-214ENST00000493387 NCAPH2Q6IBW4 605 aa12.99□□□□□ -0.33
LSM2-214ENST00000493387 ABHD15Q6UXT9 468 aa12.99□□□□□ -0.33
LSM2-214ENST00000493387 TSEN34Q9BSV6 310 aaKnown RBP12.99□□□□□ -0.33
LSM2-214ENST00000493387 AZI2Q9H6S1 392 aa12.99□□□□□ -0.33
LSM2-214ENST00000493387 MYH15Q9Y2K3 1946 aa12.99□□□□□ -0.33
LSM2-214ENST00000493387 SYNRGQ9UMZ2 1314 aa12.98□□□□□ -0.33
LSM2-214ENST00000493387 GSTTP1A0A1W2PQM5 241 aa12.98□□□□□ -0.33
LSM2-214ENST00000493387 GOLGA6L4A6NEF3 574 aa12.98□□□□□ -0.33
LSM2-214ENST00000493387 GOLGA6L22H0YM25 854 aa12.98□□□□□ -0.33
LSM2-214ENST00000493387 SORBS3O60504 671 aa12.98□□□□□ -0.33
LSM2-214ENST00000493387 ADAMTS4O75173 837 aa12.98□□□□□ -0.33
LSM2-214ENST00000493387 LGR5O75473 907 aa12.98□□□□□ -0.33
LSM2-214ENST00000493387 P4HBP07237 508 aaKnown RBP12.98□□□□□ -0.33
LSM2-214ENST00000493387 MMP3P08254 477 aa12.98□□□□□ -0.33
LSM2-214ENST00000493387 SUPT20HL2P0C7V6 817 aa12.98□□□□□ -0.33
LSM2-214ENST00000493387 MUTP22033 750 aa12.98□□□□□ -0.33
LSM2-214ENST00000493387 TCF7P36402 384 aaPredicted RBP12.98□□□□□ -0.33
LSM2-214ENST00000493387 TXLNAP40222 546 aa12.98□□□□□ -0.33
LSM2-214ENST00000493387 UBA7P41226 1012 aa12.98□□□□□ -0.33
LSM2-214ENST00000493387 SLC26A2P50443 739 aa12.98□□□□□ -0.33
LSM2-214ENST00000493387 IL17AQ16552 155 aa12.98□□□□□ -0.33
LSM2-214ENST00000493387 GNASQ5JWF2 1037 aa12.98□□□□□ -0.33
LSM2-214ENST00000493387 ADALQ6DHV7 355 aa12.98□□□□□ -0.33
LSM2-214ENST00000493387 KCTD17Q8N5Z5 321 aa12.98□□□□□ -0.33
LSM2-214ENST00000493387 KLHDC9Q8NEP7 349 aa12.98□□□□□ -0.33
LSM2-214ENST00000493387 ATP6V0A1Q93050 837 aa12.98□□□□□ -0.33
LSM2-214ENST00000493387 DEFB118Q96PH6 123 aa12.98□□□□□ -0.33
LSM2-214ENST00000493387 SMARCAD1Q9H4L7 1026 aa12.98□□□□□ -0.33
LSM2-214ENST00000493387 BCAS3Q9H6U6 928 aa12.98□□□□□ -0.33
LSM2-214ENST00000493387 TUFT1Q9NNX1 390 aa12.98□□□□□ -0.33
LSM2-214ENST00000493387 PCDHA7Q9UN72 937 aa12.98□□□□□ -0.33
LSM2-214ENST00000493387 CEP350Q5VT06 3117 aa12.97□□□□□ -0.33
LSM2-214ENST00000493387 IGKV6D-21A0A0A0MT36 114 aa12.97□□□□□ -0.33
LSM2-214ENST00000493387 POTEMA6NI47 508 aa12.97□□□□□ -0.33
LSM2-214ENST00000493387 EML1O00423 815 aa12.97□□□□□ -0.33
LSM2-214ENST00000493387 BACH1O14867 736 aa12.97□□□□□ -0.33
LSM2-214ENST00000493387 CABYRO75952 493 aa12.97□□□□□ -0.33
LSM2-214ENST00000493387 SGPL1O95470 568 aa12.97□□□□□ -0.33
LSM2-214ENST00000493387 PGK1P00558 417 aa12.97□□□□□ -0.33
LSM2-214ENST00000493387 QARSP47897 775 aaKnown RBP12.97□□□□□ -0.33
LSM2-214ENST00000493387 PSMC5P62195 406 aa12.97□□□□□ -0.33
LSM2-214ENST00000493387 LRRC41Q15345 812 aa12.97□□□□□ -0.33
LSM2-214ENST00000493387 PLPPR4Q7Z2D5 763 aa12.97□□□□□ -0.33
LSM2-214ENST00000493387 TMEM87AQ8NBN3 555 aa12.97□□□□□ -0.33
LSM2-214ENST00000493387 AFAP1L1Q8TED9 768 aa12.97□□□□□ -0.33
LSM2-214ENST00000493387 LENG1Q96BZ8 264 aaPredicted RBP12.97□□□□□ -0.33
LSM2-214ENST00000493387 CHAMP1Q96JM3 812 aa12.97□□□□□ -0.33
LSM2-214ENST00000493387 EIF2AK1Q9BQI3 630 aaKnown RBP12.97□□□□□ -0.33
LSM2-214ENST00000493387 POLR3CQ9BUI4 534 aaPredicted RBP12.97□□□□□ -0.33
LSM2-214ENST00000493387 CCSER1Q9C0I3 900 aa12.97□□□□□ -0.33
LSM2-214ENST00000493387 CRISPLD2Q9H0B8 497 aa12.97□□□□□ -0.33
LSM2-214ENST00000493387 CSRNP2Q9H175 543 aa12.97□□□□□ -0.33
LSM2-214ENST00000493387 ZNF302Q9NR11 478 aa12.97□□□□□ -0.33
LSM2-214ENST00000493387 FAM13BQ9NYF5 915 aa12.97□□□□□ -0.33
LSM2-214ENST00000493387 ZNF215Q9UL58 517 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms