RNA–Protein interactions for RNA: ENST00000493185.2

CLTA-208, Transcript of clathrin light chain A, humanhuman

TSL 3

Gene CLTA, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-208ENST00000493185 APOBRQ0VD83 1088 aa23.53■■□□□ 1.36
CLTA-208ENST00000493185 ADGRE1Q14246 886 aa23.53■■□□□ 1.36
CLTA-208ENST00000493185 USP38Q8NB14 1042 aa23.53■■□□□ 1.36
CLTA-208ENST00000493185 PPM1EQ8WY54 764 aa23.53■■□□□ 1.36
CLTA-208ENST00000493185 SEPT1Q8WYJ6 367 aa23.53■■□□□ 1.36
CLTA-208ENST00000493185 SETD4Q9NVD3 440 aa23.53■■□□□ 1.36
CLTA-208ENST00000493185 SMCO2A6NFE2 343 aa23.52■■□□□ 1.36
CLTA-208ENST00000493185 LGR5O75473 907 aa23.52■■□□□ 1.36
CLTA-208ENST00000493185 MBTPS1Q14703 1052 aa23.52■■□□□ 1.36
CLTA-208ENST00000493185 BRF1Q92994 677 aa23.52■■□□□ 1.36
CLTA-208ENST00000493185 ZBED2Q9BTP6 218 aa23.52■■□□□ 1.36
CLTA-208ENST00000493185 PSMA5P28066 241 aa23.51■■□□□ 1.35
CLTA-208ENST00000493185 ADD1P35611 737 aaKnown RBP23.51■■□□□ 1.35
CLTA-208ENST00000493185 DEFB103AP81534 67 aa23.51■■□□□ 1.35
CLTA-208ENST00000493185 ARHGAP4P98171 946 aa23.51■■□□□ 1.35
CLTA-208ENST00000493185 AP3B2Q13367 1082 aa23.51■■□□□ 1.35
CLTA-208ENST00000493185 PGBD1Q96JS3 809 aa23.51■■□□□ 1.35
CLTA-208ENST00000493185 MXRA8Q9BRK3 442 aa23.51■■□□□ 1.35
CLTA-208ENST00000493185 COL25A1Q9BXS0 654 aaPredicted RBP23.51■■□□□ 1.35
CLTA-208ENST00000493185 ANO3Q9BYT9 981 aa23.51■■□□□ 1.35
CLTA-208ENST00000493185 ERAP1Q9NZ08 941 aa23.51■■□□□ 1.35
CLTA-208ENST00000493185 NRCAMQ92823 1304 aa23.51■■□□□ 1.35
CLTA-208ENST00000493185 GSTTP1A0A1W2PQM5 241 aa23.5■■□□□ 1.35
CLTA-208ENST00000493185 RPS6KB1P23443 525 aa23.5■■□□□ 1.35
CLTA-208ENST00000493185 PFKFB3Q16875 520 aaPredicted RBP23.5■■□□□ 1.35
CLTA-208ENST00000493185 FBXL16Q8N461 479 aa23.5■■□□□ 1.35
CLTA-208ENST00000493185 LMBR1Q8WVP7 490 aa23.5■■□□□ 1.35
CLTA-208ENST00000493185 GLG1Q92896 1179 aa23.5■■□□□ 1.35
CLTA-208ENST00000493185 JPH1Q9HDC5 661 aaPredicted RBP23.5■■□□□ 1.35
CLTA-208ENST00000493185 KCNH7Q9NS40 1196 aa23.5■■□□□ 1.35
CLTA-208ENST00000493185 MICAL3Q7RTP6 2002 aa23.49■■□□□ 1.35
CLTA-208ENST00000493185 CTSHP09668 335 aa23.49■■□□□ 1.35
CLTA-208ENST00000493185 SCG2P13521 617 aa23.49■■□□□ 1.35
CLTA-208ENST00000493185 TAP1Q03518 808 aa23.49■■□□□ 1.35
CLTA-208ENST00000493185 TCTN1Q2MV58 587 aa23.49■■□□□ 1.35
CLTA-208ENST00000493185 SDF4Q9BRK5 362 aa23.49■■□□□ 1.35
CLTA-208ENST00000493185 SMARCAD1Q9H4L7 1026 aa23.49■■□□□ 1.35
CLTA-208ENST00000493185 CERS4Q9HA82 394 aa23.49■■□□□ 1.35
CLTA-208ENST00000493185 MARK3P27448 753 aa23.48■■□□□ 1.35
CLTA-208ENST00000493185 SREBF1P36956 1147 aa23.48■■□□□ 1.35
CLTA-208ENST00000493185 ADAM17P78536 824 aa23.48■■□□□ 1.35
CLTA-208ENST00000493185 PPFIA1Q13136 1202 aa23.48■■□□□ 1.35
CLTA-208ENST00000493185 CCDC85BQ15834 202 aaPredicted RBP23.48■■□□□ 1.35
CLTA-208ENST00000493185 CEP55Q53EZ4 464 aa23.48■■□□□ 1.35
CLTA-208ENST00000493185 DBF4BQ8NFT6 615 aa23.48■■□□□ 1.35
CLTA-208ENST00000493185 CCDC12Q8WUD4 166 aaPredicted RBP23.48■■□□□ 1.35
CLTA-208ENST00000493185 TMEM260Q9NX78 707 aa23.48■■□□□ 1.35
CLTA-208ENST00000493185 SLC9A2Q9UBY0 812 aa23.48■■□□□ 1.35
CLTA-208ENST00000493185 NID2Q14112 1375 aa23.48■■□□□ 1.35
CLTA-208ENST00000493185 EPB41L2O43491 1005 aaKnown RBP23.47■■□□□ 1.35
CLTA-208ENST00000493185 GJB5O95377 273 aa23.47■■□□□ 1.35
CLTA-208ENST00000493185 ZNF76P36508 570 aa23.47■■□□□ 1.35
CLTA-208ENST00000493185 CLK2P49760 499 aaKnown RBP23.47■■□□□ 1.35
CLTA-208ENST00000493185 AKAP17AQ02040 695 aaKnown RBP23.47■■□□□ 1.35
CLTA-208ENST00000493185 PLEKHG4Q58EX7 1191 aa23.47■■□□□ 1.35
CLTA-208ENST00000493185 TAF2Q6P1X5 1199 aa23.47■■□□□ 1.35
CLTA-208ENST00000493185 TMCO2Q7Z6W1 182 aaPredicted RBP23.47■■□□□ 1.35
CLTA-208ENST00000493185 CYP2W1Q8TAV3 490 aa23.47■■□□□ 1.35
CLTA-208ENST00000493185 ARNTL2Q8WYA1 636 aa23.47■■□□□ 1.35
CLTA-208ENST00000493185 SEPT8Q92599 483 aa23.47■■□□□ 1.35
CLTA-208ENST00000493185 NFASCO94856 1347 aa23.47■■□□□ 1.35
CLTA-208ENST00000493185 GTPBP6O43824 516 aaPredicted RBP23.46■■□□□ 1.35
CLTA-208ENST00000493185 AMHP03971 560 aa23.46■■□□□ 1.35
CLTA-208ENST00000493185 MICALL1Q8N3F8 863 aa23.46■■□□□ 1.35
CLTA-208ENST00000493185 RAD9AQ99638 391 aa23.46■■□□□ 1.35
CLTA-208ENST00000493185 AGXT2Q9BYV1 514 aa23.46■■□□□ 1.35
CLTA-208ENST00000493185 AZI2Q9H6S1 392 aa23.46■■□□□ 1.35
CLTA-208ENST00000493185 ESYT2A0FGR8 921 aa23.45■■□□□ 1.34
CLTA-208ENST00000493185 PRPF3O43395 683 aaKnown RBP23.45■■□□□ 1.34
CLTA-208ENST00000493185 ARHGEF15O94989 841 aa23.45■■□□□ 1.34
CLTA-208ENST00000493185 ARP10275 920 aa23.45■■□□□ 1.34
CLTA-208ENST00000493185 GRIK4Q16099 956 aa23.45■■□□□ 1.34
CLTA-208ENST00000493185 JAKMIP3Q5VZ66 844 aa23.45■■□□□ 1.34
CLTA-208ENST00000493185 MCTP2Q6DN12 878 aa23.45■■□□□ 1.34
CLTA-208ENST00000493185 RSPH3Q86UC2 560 aa23.45■■□□□ 1.34
CLTA-208ENST00000493185 SYMPKQ92797 1274 aaKnown RBP23.45■■□□□ 1.34
CLTA-208ENST00000493185 TSPYL2Q9H2G4 693 aaPredicted RBP23.45■■□□□ 1.34
CLTA-208ENST00000493185 AGO4Q9HCK5 861 aaKnown RBP23.45■■□□□ 1.34
CLTA-208ENST00000493185 C6orf50Q9HD87 102 aa23.45■■□□□ 1.34
CLTA-208ENST00000493185 TUBE1Q9UJT0 475 aa23.45■■□□□ 1.34
CLTA-208ENST00000493185 LCHNA4D1U4 455 aa23.44■■□□□ 1.34
CLTA-208ENST00000493185 RFXAPO00287 272 aa23.44■■□□□ 1.34
CLTA-208ENST00000493185 MEIS1O00470 390 aa23.44■■□□□ 1.34
CLTA-208ENST00000493185 FAM26DQ5JW98 314 aa23.44■■□□□ 1.34
CLTA-208ENST00000493185 FAM117BQ6P1L5 589 aa23.44■■□□□ 1.34
CLTA-208ENST00000493185 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.44■■□□□ 1.346e-22■■■□□ 17.6
CLTA-208ENST00000493185 NIPA1Q7RTP0 329 aa23.44■■□□□ 1.34
CLTA-208ENST00000493185 MYOCDQ8IZQ8 938 aa23.44■■□□□ 1.34
CLTA-208ENST00000493185 TNPO1Q92973 898 aaKnown RBP23.44■■□□□ 1.34
CLTA-208ENST00000493185 ZMYND12Q9H0C1 365 aa23.44■■□□□ 1.34
CLTA-208ENST00000493185 PRDM6Q9NQX0 595 aa23.44■■□□□ 1.34
CLTA-208ENST00000493185 THEGQ9P2T0 379 aa23.44■■□□□ 1.34
CLTA-208ENST00000493185 PRRC2BQ5JSZ5 2229 aaKnown RBP23.43■■□□□ 1.34
CLTA-208ENST00000493185 EPOPA6NHQ4 379 aa23.43■■□□□ 1.34
CLTA-208ENST00000493185 POU3F3P20264 500 aaPredicted RBP23.43■■□□□ 1.34
CLTA-208ENST00000493185 GNA11P29992 359 aa23.43■■□□□ 1.34
CLTA-208ENST00000493185 ACTR2P61160 394 aa23.43■■□□□ 1.34
CLTA-208ENST00000493185 TJAP1Q5JTD0 557 aa23.43■■□□□ 1.34
CLTA-208ENST00000493185 RUFY4Q6ZNE9 571 aa23.43■■□□□ 1.34
CLTA-208ENST00000493185 RUFY3Q7L099 469 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms