RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 COG1Q8WTW3 980 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 ANKRD7Q92527 254 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 NRBF2Q96F24 287 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 COG3Q96JB2 828 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 LRGUKQ96M69 825 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 EDEM3Q9BZQ6 932 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 WDR12Q9GZL7 423 aaKnown RBP4.69□□□□□ -1.66
BRCA1-220ENST00000492859 LIN28AQ9H9Z2 209 aaKnown RBP4.69□□□□□ -1.66
BRCA1-220ENST00000492859 XAB2Q9HCS7 855 aaKnown RBP4.69□□□□□ -1.66
BRCA1-220ENST00000492859 CD93Q9NPY3 652 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 PRDM5Q9NQX1 630 aaPredicted RBP4.69□□□□□ -1.66
BRCA1-220ENST00000492859 GGA3Q9NZ52 723 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 CALCOCO1Q9P1Z2 691 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 GRID1Q9ULK0 1009 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 PPT2Q9UMR5 302 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 PCDHGC3Q9UN70 934 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 FCF1Q9Y324 198 aaKnown RBP4.69□□□□□ -1.66
BRCA1-220ENST00000492859 SPEF1Q9Y4P9 236 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 ZNF804BA4D1E1 1349 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 HNRNPCL2B2RXH8 293 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 B4DLN1 442 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 CFAP99D6REC4 459 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 CAPN9O14815 690 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 PLSCR1O15162 318 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 HNRNPCL1O60812 293 aaKnown RBP4.68□□□□□ -1.66
BRCA1-220ENST00000492859 DDHD2O94830 711 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 SLITRK5O94991 958 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 PCNAP12004 261 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 ATP1A3P13637 1013 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 TMEM11P17152 192 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 HDCP19113 662 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 GGCXP38435 758 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 IL6STP40189 918 aaPredicted RBP4.68□□□□□ -1.66
BRCA1-220ENST00000492859 ATP1A2P50993 1020 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 PMS1P54277 932 aaKnown RBP4.68□□□□□ -1.66
BRCA1-220ENST00000492859 GPR85P60893 370 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 CCNA1P78396 465 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 SSRP1Q08945 709 aaKnown RBP4.68□□□□□ -1.66
BRCA1-220ENST00000492859 BNIP1Q12981 228 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 TERF2Q15554 542 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 KIAA0753Q2KHM9 967 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 ZNF423Q2M1K9 1284 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 EML3Q32P44 896 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 TSGA10IPQ3SY00 556 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 KBTBD12Q3ZCT8 623 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 KRBOX4Q5JUW0 171 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 SH2D4BQ5SQS7 431 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 CCDC183Q5T5S1 534 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 TPGS2Q68CL5 300 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 MCTP1Q6DN14 999 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 DBX2Q6ZNG2 339 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 PLEKHM3Q6ZWE6 761 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 ATG9AQ7Z3C6 839 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 DGLUCYQ7Z3D6 616 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 CCDC91Q7Z6B0 441 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 LRRTM3Q86VH5 581 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 TMEM57Q8N5G2 664 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 GOLGA6L1Q8N7Z2 621 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 CCDC26Q8TAB7 109 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 SLC30A5Q8TAD4 765 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 ERMNQ8TAM6 284 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 DENND1AQ8TEH3 1009 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 SLC7A3Q8WY07 619 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 SHC3Q92529 594 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 TRIM63Q969Q1 353 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 NAP1L3Q99457 506 aaPredicted RBP4.68□□□□□ -1.66
BRCA1-220ENST00000492859 SDF4Q9BRK5 362 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 ESYT1Q9BSJ8 1104 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 CRACR2AQ9BSW2 395 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 FSD1Q9BTV5 496 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 TTLL2Q9BWV7 592 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 B3GNT4Q9C0J1 378 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 PEG3Q9GZU2 1588 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 PUS7LQ9H0K6 701 aaKnown RBP4.68□□□□□ -1.66
BRCA1-220ENST00000492859 VCX3BQ9H321 246 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 AAASQ9NRG9 546 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 IL20Q9NYY1 176 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 ZMYM5Q9UJ78 669 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 AGO2Q9UKV8 859 aaKnown RBP4.68□□□□□ -1.66
BRCA1-220ENST00000492859 EDARQ9UNE0 448 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 SLC4A4Q9Y6R1 1079 aa4.68□□□□□ -1.66
BRCA1-220ENST00000492859 FAM83GA6ND36 823 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 TRIM75PA6NK02 468 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 A6NNZ2 444 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 TISP43B9A030 160 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 B9A039 149 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 UBXN8O00124 270 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 OPLAHO14841 1288 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 ERC2O15083 957 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 RFPL3O75679 317 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 FBXO21O94952 628 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 FAM153BP0C7A2 387 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 ZSCAN22P10073 491 aaPredicted RBP4.67□□□□□ -1.66
BRCA1-220ENST00000492859 CPEP16870 476 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 ATP4AP20648 1035 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 FGFR4P22455 802 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 TPP2P29144 1249 aaPredicted RBP4.67□□□□□ -1.66
BRCA1-220ENST00000492859 ATP5DP30049 168 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 SULT1E1P49888 294 aa4.67□□□□□ -1.66
BRCA1-220ENST00000492859 RPS6KA3P51812 740 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms