RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 RWDD3Q9Y3V2 267 aa10.5□□□□□ -0.73
HDAC3-212ENST00000492407 RBM8AQ9Y5S9 174 aaKnown RBP10.5□□□□□ -0.73
HDAC3-212ENST00000492407 SQORQ9Y6N5 450 aa10.5□□□□□ -0.73
HDAC3-212ENST00000492407 COL4A6Q14031 1691 aa10.5□□□□□ -0.73
HDAC3-212ENST00000492407 CCDC69A6NI79 296 aa10.49□□□□□ -0.73
HDAC3-212ENST00000492407 H3BNC9 293 aa10.49□□□□□ -0.73
HDAC3-212ENST00000492407 SH2B2O14492 632 aaPredicted RBP10.49□□□□□ -0.73
HDAC3-212ENST00000492407 PRC1O43663 620 aa10.49□□□□□ -0.73
HDAC3-212ENST00000492407 RB1P06400 928 aa10.49□□□□□ -0.73
HDAC3-212ENST00000492407 TIGD5Q53EQ6 642 aa10.49□□□□□ -0.73
HDAC3-212ENST00000492407 KRT40Q6A162 431 aa10.49□□□□□ -0.73
HDAC3-212ENST00000492407 USP17L6PQ6QN14 398 aa10.49□□□□□ -0.73
HDAC3-212ENST00000492407 TMCO2Q7Z6W1 182 aaPredicted RBP10.49□□□□□ -0.73
HDAC3-212ENST00000492407 MYOCDQ8IZQ8 938 aa10.49□□□□□ -0.73
HDAC3-212ENST00000492407 GDPD5Q8WTR4 605 aa10.49□□□□□ -0.73
HDAC3-212ENST00000492407 YTHDC1Q96MU7 727 aaKnown RBP10.49□□□□□ -0.73
HDAC3-212ENST00000492407 SMARCAD1Q9H4L7 1026 aa10.49□□□□□ -0.73
HDAC3-212ENST00000492407 BCAS3Q9H6U6 928 aa10.49□□□□□ -0.73
HDAC3-212ENST00000492407 UBE2ZQ9H832 354 aaPredicted RBP10.49□□□□□ -0.73
HDAC3-212ENST00000492407 EHMT1Q9H9B1 1298 aa10.49□□□□□ -0.73
HDAC3-212ENST00000492407 SETD4Q9NVD3 440 aa10.49□□□□□ -0.73
HDAC3-212ENST00000492407 ERAP1Q9NZ08 941 aa10.49□□□□□ -0.73
HDAC3-212ENST00000492407 RTEL1Q9NZ71 1219 aa10.49□□□□□ -0.73
HDAC3-212ENST00000492407 SUPT16HQ9Y5B9 1047 aaKnown RBP10.49□□□□□ -0.73
HDAC3-212ENST00000492407 TAF6LQ9Y6J9 622 aa10.49□□□□□ -0.73
HDAC3-212ENST00000492407 MBLAC1A4D2B0 266 aaPredicted RBP10.48□□□□□ -0.73
HDAC3-212ENST00000492407 RRN3P2A6NIE6 340 aa10.48□□□□□ -0.73
HDAC3-212ENST00000492407 C5orf67F2Z3F1 127 aa10.48□□□□□ -0.73
HDAC3-212ENST00000492407 KCNA2P16389 499 aa10.48□□□□□ -0.73
HDAC3-212ENST00000492407 COL19A1Q14993 1142 aa10.48□□□□□ -0.73
HDAC3-212ENST00000492407 EPC2Q52LR7 807 aa10.48□□□□□ -0.73
HDAC3-212ENST00000492407 NFXL1Q6ZNB6 911 aa10.48□□□□□ -0.73
HDAC3-212ENST00000492407 SGMS1Q86VZ5 419 aa10.48□□□□□ -0.73
HDAC3-212ENST00000492407 SRBD1Q8N5C6 995 aaKnown RBP10.48□□□□□ -0.73
HDAC3-212ENST00000492407 FANCBQ8NB91 859 aa10.48□□□□□ -0.73
HDAC3-212ENST00000492407 LMBR1Q8WVP7 490 aa10.48□□□□□ -0.73
HDAC3-212ENST00000492407 IL17RAQ96F46 866 aa10.48□□□□□ -0.73
HDAC3-212ENST00000492407 YME1L1Q96TA2 773 aa10.48□□□□□ -0.73
HDAC3-212ENST00000492407 IFIH1Q9BYX4 1025 aaKnown RBP10.48□□□□□ -0.73
HDAC3-212ENST00000492407 LMAN2LQ9H0V9 348 aa10.48□□□□□ -0.73
HDAC3-212ENST00000492407 GLT8D2Q9H1C3 349 aa10.48□□□□□ -0.73
HDAC3-212ENST00000492407 JADE2Q9NQC1 790 aa10.48□□□□□ -0.73
HDAC3-212ENST00000492407 UBIAD1Q9Y5Z9 338 aa10.48□□□□□ -0.73
HDAC3-212ENST00000492407 SLC12A7Q9Y666 1083 aa10.48□□□□□ -0.73
HDAC3-212ENST00000492407 TET1Q8NFU7 2136 aa10.48□□□□□ -0.73
HDAC3-212ENST00000492407 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.47□□□□□ -0.73
HDAC3-212ENST00000492407 GSTTP1A0A1W2PQM5 241 aa10.47□□□□□ -0.73
HDAC3-212ENST00000492407 SPDYE3A6NKU9 549 aa10.47□□□□□ -0.73
HDAC3-212ENST00000492407 hCG_1984214I3L0E3 225 aa10.47□□□□□ -0.73
HDAC3-212ENST00000492407 SORBS3O60504 671 aa10.47□□□□□ -0.73
HDAC3-212ENST00000492407 GPR37L1O60883 481 aa10.47□□□□□ -0.73
HDAC3-212ENST00000492407 FOSP01100 380 aaPredicted RBP10.47□□□□□ -0.73
HDAC3-212ENST00000492407 ITGB5P18084 799 aa10.47□□□□□ -0.73
HDAC3-212ENST00000492407 TCF7P36402 384 aaPredicted RBP10.47□□□□□ -0.73
HDAC3-212ENST00000492407 ARHGAP4P98171 946 aa10.47□□□□□ -0.73
HDAC3-212ENST00000492407 MTMR1Q13613 665 aa10.47□□□□□ -0.73
HDAC3-212ENST00000492407 NECTIN1Q15223 517 aa10.47□□□□□ -0.73
HDAC3-212ENST00000492407 UTP14CQ5TAP6 766 aaKnown RBP10.47□□□□□ -0.73
HDAC3-212ENST00000492407 RNF20Q5VTR2 975 aa10.47□□□□□ -0.73
HDAC3-212ENST00000492407 PPP1R18Q6NYC8 613 aa10.47□□□□□ -0.73
HDAC3-212ENST00000492407 FAM117BQ6P1L5 589 aa10.47□□□□□ -0.73
HDAC3-212ENST00000492407 SYNE3Q6ZMZ3 975 aa10.47□□□□□ -0.73
HDAC3-212ENST00000492407 SPRED2Q7Z698 418 aa10.47□□□□□ -0.73
HDAC3-212ENST00000492407 TMEM192Q8IY95 271 aa10.47□□□□□ -0.73
HDAC3-212ENST00000492407 ZNF713Q8N859 430 aaPredicted RBP10.47□□□□□ -0.73
HDAC3-212ENST00000492407 NEK9Q8TD19 979 aa10.47□□□□□ -0.73
HDAC3-212ENST00000492407 ZFP91Q96JP5 570 aaPredicted RBP10.47□□□□□ -0.73
HDAC3-212ENST00000492407 NECAB3Q96P71 396 aaPredicted RBP10.47□□□□□ -0.73
HDAC3-212ENST00000492407 C17orf80Q9BSJ5 609 aa10.47□□□□□ -0.73
HDAC3-212ENST00000492407 LSG1Q9H089 658 aaKnown RBP10.47□□□□□ -0.73
HDAC3-212ENST00000492407 FAM50BQ9Y247 325 aa10.47□□□□□ -0.73
HDAC3-212ENST00000492407 MYO9BQ13459 2157 aa10.47□□□□□ -0.73
HDAC3-212ENST00000492407 NCOR1O75376 2440 aa10.47□□□□□ -0.73
HDAC3-212ENST00000492407 REV3LO60673 3130 aa10.47□□□□□ -0.73
HDAC3-212ENST00000492407 PRRC2BQ5JSZ5 2229 aaKnown RBP10.46□□□□□ -0.73
HDAC3-212ENST00000492407 PI4K2BG5E9Z4 385 aa10.46□□□□□ -0.73
HDAC3-212ENST00000492407 SLC27A2O14975 620 aa10.46□□□□□ -0.73
HDAC3-212ENST00000492407 ATP9AO75110 1047 aa10.46□□□□□ -0.73
HDAC3-212ENST00000492407 PLEKHA8P1O95397 391 aa10.46□□□□□ -0.73
HDAC3-212ENST00000492407 CHRNA1P02708 482 aa10.46□□□□□ -0.73
HDAC3-212ENST00000492407 SLC26A2P50443 739 aa10.46□□□□□ -0.73
HDAC3-212ENST00000492407 RCAN1P53805 252 aa10.46□□□□□ -0.73
HDAC3-212ENST00000492407 MGAT3Q09327 533 aa10.46□□□□□ -0.73
HDAC3-212ENST00000492407 PPFIA1Q13136 1202 aa10.46□□□□□ -0.73
HDAC3-212ENST00000492407 GPM6BQ13491 265 aa10.46□□□□□ -0.73
HDAC3-212ENST00000492407 NAALADL2Q58DX5 795 aa10.46□□□□□ -0.73
HDAC3-212ENST00000492407 IER5Q5VY09 327 aa10.46□□□□□ -0.73
HDAC3-212ENST00000492407 TMTC3Q6ZXV5 915 aa10.46□□□□□ -0.73
HDAC3-212ENST00000492407 PLPPR4Q7Z2D5 763 aa10.46□□□□□ -0.73
HDAC3-212ENST00000492407 NME8Q8N427 588 aa10.46□□□□□ -0.73
HDAC3-212ENST00000492407 FIBCD1Q8N539 461 aa10.46□□□□□ -0.73
HDAC3-212ENST00000492407 CLP1Q92989 425 aaKnown RBP10.46□□□□□ -0.73
HDAC3-212ENST00000492407 ESYT1Q9BSJ8 1104 aa10.46□□□□□ -0.73
HDAC3-212ENST00000492407 PLVAPQ9BX97 442 aa10.46□□□□□ -0.73
HDAC3-212ENST00000492407 FTHL17Q9BXU8 183 aa10.46□□□□□ -0.73
HDAC3-212ENST00000492407 RBM28Q9NW13 759 aaKnown RBP10.46□□□□□ -0.73
HDAC3-212ENST00000492407 MTUS1Q9ULD2 1270 aa10.46□□□□□ -0.73
HDAC3-212ENST00000492407 PCDHA6Q9UN73 950 aa10.46□□□□□ -0.73
HDAC3-212ENST00000492407 PCDHA8Q9Y5H6 950 aa10.46□□□□□ -0.73
HDAC3-212ENST00000492407 NFASCO94856 1347 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms