RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 COL9A3Q14050 684 aaPredicted RBP13.72□□□□□ -0.21
CACNA1C-228ENST00000492150 CCDC62Q6P9F0 684 aa13.72□□□□□ -0.21
CACNA1C-228ENST00000492150 SEPT8Q92599 483 aa13.72□□□□□ -0.21
CACNA1C-228ENST00000492150 NEK1Q96PY6 1258 aa13.72□□□□□ -0.21
CACNA1C-228ENST00000492150 CDCA3Q99618 268 aaPredicted RBP13.72□□□□□ -0.21
CACNA1C-228ENST00000492150 S1PR5Q9H228 398 aa13.72□□□□□ -0.21
CACNA1C-228ENST00000492150 WDR19Q8NEZ3 1342 aa13.71□□□□□ -0.21
CACNA1C-228ENST00000492150 MAST4O15021 2626 aa13.71□□□□□ -0.21
CACNA1C-228ENST00000492150 SPEGQ15772 3267 aa13.71□□□□□ -0.21
CACNA1C-228ENST00000492150 RBAK-RBAKDNI3L0D1 243 aa13.71□□□□□ -0.21
CACNA1C-228ENST00000492150 SNHG28P0DPA3 235 aa13.71□□□□□ -0.21
CACNA1C-228ENST00000492150 DNAJB1P25685 340 aa13.71□□□□□ -0.21
CACNA1C-228ENST00000492150 CHMP4BP1P59074 171 aa13.71□□□□□ -0.21
CACNA1C-228ENST00000492150 ZNF543Q08ER8 600 aa13.71□□□□□ -0.21
CACNA1C-228ENST00000492150 RRP12Q5JTH9 1297 aaKnown RBP13.71□□□□□ -0.21
CACNA1C-228ENST00000492150 TMEM184AQ6ZMB5 413 aa13.71□□□□□ -0.21
CACNA1C-228ENST00000492150 CRIPAKQ8N1N5 446 aa13.71□□□□□ -0.21
CACNA1C-228ENST00000492150 AFG1LQ8WV93 481 aa13.71□□□□□ -0.21
CACNA1C-228ENST00000492150 KAT2BQ92831 832 aa13.71□□□□□ -0.21
CACNA1C-228ENST00000492150 MPHOSPH6Q99547 160 aaKnown RBP13.71□□□□□ -0.21
CACNA1C-228ENST00000492150 SMOC2Q9H3U7 446 aa13.71□□□□□ -0.21
CACNA1C-228ENST00000492150 TOMM22Q9NS69 142 aa13.71□□□□□ -0.21
CACNA1C-228ENST00000492150 ANGPTL2Q9UKU9 493 aa13.71□□□□□ -0.21
CACNA1C-228ENST00000492150 PNMA2Q9UL42 364 aa13.71□□□□□ -0.21
CACNA1C-228ENST00000492150 SALL3Q9BXA9 1300 aa13.7□□□□□ -0.22
CACNA1C-228ENST00000492150 FGAP02671 866 aa13.7□□□□□ -0.22
CACNA1C-228ENST00000492150 MMP3P08254 477 aa13.7□□□□□ -0.22
CACNA1C-228ENST00000492150 MX1P20591 662 aa13.7□□□□□ -0.22
CACNA1C-228ENST00000492150 ARHGAP1Q07960 439 aa13.7□□□□□ -0.22
CACNA1C-228ENST00000492150 RGS22Q8NE09 1264 aa13.7□□□□□ -0.22
CACNA1C-228ENST00000492150 SPPL3Q8TCT6 385 aa13.7□□□□□ -0.22
CACNA1C-228ENST00000492150 TBC1D5Q92609 795 aa13.7□□□□□ -0.22
CACNA1C-228ENST00000492150 WNT8BQ93098 351 aa13.7□□□□□ -0.22
CACNA1C-228ENST00000492150 PCDHB15Q9Y5E8 787 aa13.7□□□□□ -0.22
CACNA1C-228ENST00000492150 PLXNA4Q9HCM2 1894 aa13.7□□□□□ -0.22
CACNA1C-228ENST00000492150 RSPH10B2B2RC85 870 aa13.69□□□□□ -0.22
CACNA1C-228ENST00000492150 B4DLN1 442 aa13.69□□□□□ -0.22
CACNA1C-228ENST00000492150 CSPG5O95196 566 aa13.69□□□□□ -0.22
CACNA1C-228ENST00000492150 RSPH10BP0C881 870 aa13.69□□□□□ -0.22
CACNA1C-228ENST00000492150 SRGAP2BP0DMP2 458 aa13.69□□□□□ -0.22
CACNA1C-228ENST00000492150 MRPL12P52815 198 aaKnown RBP13.69□□□□□ -0.22
CACNA1C-228ENST00000492150 SHC2P98077 582 aa13.69□□□□□ -0.22
CACNA1C-228ENST00000492150 LY6KQ17RY6 165 aa13.69□□□□□ -0.22
CACNA1C-228ENST00000492150 PPM1JQ5JR12 505 aa13.69□□□□□ -0.22
CACNA1C-228ENST00000492150 APBB2Q92870 758 aa13.69□□□□□ -0.22
CACNA1C-228ENST00000492150 ZNF689Q96CS4 500 aaPredicted RBP13.69□□□□□ -0.22
CACNA1C-228ENST00000492150 HELLSQ9NRZ9 838 aa13.69□□□□□ -0.22
CACNA1C-228ENST00000492150 RNF216Q9NWF9 866 aaPredicted RBP13.69□□□□□ -0.22
CACNA1C-228ENST00000492150 HDAC6Q9UBN7 1215 aa13.69□□□□□ -0.22
CACNA1C-228ENST00000492150 TTC3P53804 2025 aa13.69□□□□□ -0.22
CACNA1C-228ENST00000492150 ZZEF1O43149 2961 aa13.68□□□□□ -0.22
CACNA1C-228ENST00000492150 GCN1Q92616 2671 aaKnown RBP13.68□□□□□ -0.22
CACNA1C-228ENST00000492150 MYH7BA7E2Y1 1941 aa13.68□□□□□ -0.22
CACNA1C-228ENST00000492150 C2CD4DB7Z1M9 353 aa13.68□□□□□ -0.22
CACNA1C-228ENST00000492150 GH1P01241 217 aa13.68□□□□□ -0.22
CACNA1C-228ENST00000492150 ITGB1P05556 798 aa13.68□□□□□ -0.22
CACNA1C-228ENST00000492150 PROS1P07225 676 aa13.68□□□□□ -0.22
CACNA1C-228ENST00000492150 KCNC3Q14003 757 aa13.68□□□□□ -0.22
CACNA1C-228ENST00000492150 USH1GQ495M9 461 aa13.68□□□□□ -0.22
CACNA1C-228ENST00000492150 VARS2Q5ST30 1063 aaKnown RBP13.68□□□□□ -0.22
CACNA1C-228ENST00000492150 SEPT14Q6ZU15 432 aa13.68□□□□□ -0.22
CACNA1C-228ENST00000492150 RBM23Q86U06 439 aaKnown RBP13.68□□□□□ -0.22
CACNA1C-228ENST00000492150 ZDHHC14Q8IZN3 488 aa13.68□□□□□ -0.22
CACNA1C-228ENST00000492150 VN1R2Q8NFZ6 395 aa13.68□□□□□ -0.22
CACNA1C-228ENST00000492150 FAM227BQ96M60 508 aa13.68□□□□□ -0.22
CACNA1C-228ENST00000492150 TTC14Q96N46 770 aa13.68□□□□□ -0.22
CACNA1C-228ENST00000492150 NECTIN4Q96NY8 510 aa13.68□□□□□ -0.22
CACNA1C-228ENST00000492150 TAAR1Q96RJ0 339 aa13.68□□□□□ -0.22
CACNA1C-228ENST00000492150 CPVLQ9H3G5 476 aa13.68□□□□□ -0.22
CACNA1C-228ENST00000492150 TLE6Q9H808 572 aa13.68□□□□□ -0.22
CACNA1C-228ENST00000492150 COL20A1Q9P218 1284 aa13.68□□□□□ -0.22
CACNA1C-228ENST00000492150 A0A0D9SFI3 127 aa13.67□□□□□ -0.22
CACNA1C-228ENST00000492150 KINO60870 393 aaKnown RBP13.67□□□□□ -0.22
CACNA1C-228ENST00000492150 SP9P0CG40 484 aa13.67□□□□□ -0.22
CACNA1C-228ENST00000492150 GOLGA8HP0CJ92 632 aa13.67□□□□□ -0.22
CACNA1C-228ENST00000492150 ARP10275 920 aa13.67□□□□□ -0.22
CACNA1C-228ENST00000492150 HOXB8P17481 243 aaPredicted RBP13.67□□□□□ -0.22
CACNA1C-228ENST00000492150 SP100P23497 879 aaPredicted RBP13.67□□□□□ -0.22
CACNA1C-228ENST00000492150 HAND2P61296 217 aa13.67□□□□□ -0.22
CACNA1C-228ENST00000492150 DUSP6Q16828 381 aa13.67□□□□□ -0.22
CACNA1C-228ENST00000492150 ANKRD54Q6NXT1 300 aa13.67□□□□□ -0.22
CACNA1C-228ENST00000492150 CHST3Q7LGC8 479 aa13.67□□□□□ -0.22
CACNA1C-228ENST00000492150 C7orf31Q8N865 590 aa13.67□□□□□ -0.22
CACNA1C-228ENST00000492150 SYTL5Q8TDW5 730 aaPredicted RBP13.67□□□□□ -0.22
CACNA1C-228ENST00000492150 POF1BQ8WVV4 589 aa13.67□□□□□ -0.22
CACNA1C-228ENST00000492150 EVI5LQ96CN4 794 aa13.67□□□□□ -0.22
CACNA1C-228ENST00000492150 KATNAL1Q9BW62 490 aa13.67□□□□□ -0.22
CACNA1C-228ENST00000492150 UBA5Q9GZZ9 404 aa13.67□□□□□ -0.22
CACNA1C-228ENST00000492150 NCDNQ9UBB6 729 aa13.67□□□□□ -0.22
CACNA1C-228ENST00000492150 FRYQ5TBA9 3013 aa13.66□□□□□ -0.22
CACNA1C-228ENST00000492150 HSPD1P10809 573 aaKnown RBP13.66□□□□□ -0.22
CACNA1C-228ENST00000492150 CASTP20810 708 aaKnown RBP13.66□□□□□ -0.22
CACNA1C-228ENST00000492150 PMLP29590 882 aa13.66□□□□□ -0.22
CACNA1C-228ENST00000492150 PSEN2P49810 448 aa13.66□□□□□ -0.22
CACNA1C-228ENST00000492150 ZNF200P98182 395 aaPredicted RBP13.66□□□□□ -0.22
CACNA1C-228ENST00000492150 BTG3Q14201 252 aaPredicted RBP13.66□□□□□ -0.22
CACNA1C-228ENST00000492150 GPATCH4Q5T3I0 446 aaKnown RBP13.66□□□□□ -0.22
CACNA1C-228ENST00000492150 SYCE2Q6PIF2 218 aa13.66□□□□□ -0.22
CACNA1C-228ENST00000492150 ZNF589Q86UQ0 364 aaPredicted RBP13.66□□□□□ -0.22
CACNA1C-228ENST00000492150 RASGRP4Q8TDF6 673 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms