RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 AGXT2Q9BYV1 514 aa9.62□□□□□ -0.87
SMARCB1-207ENST00000491967 OSBPL7Q9BZF2 842 aa9.62□□□□□ -0.87
SMARCB1-207ENST00000491967 EHMT1Q9H9B1 1298 aa9.62□□□□□ -0.87
SMARCB1-207ENST00000491967 RIC8AQ9NPQ8 531 aa9.62□□□□□ -0.87
SMARCB1-207ENST00000491967 SETD4Q9NVD3 440 aa9.62□□□□□ -0.87
SMARCB1-207ENST00000491967 LMCD1Q9NZU5 365 aa9.62□□□□□ -0.87
SMARCB1-207ENST00000491967 PCDHA6Q9UN73 950 aa9.62□□□□□ -0.87
SMARCB1-207ENST00000491967 PCDHA8Q9Y5H6 950 aa9.62□□□□□ -0.87
SMARCB1-207ENST00000491967 hCG_1642624A0A1W2PR95 340 aa9.61□□□□□ -0.87
SMARCB1-207ENST00000491967 LCHNA4D1U4 455 aa9.61□□□□□ -0.87
SMARCB1-207ENST00000491967 LINC01553A4QN01 128 aa9.61□□□□□ -0.87
SMARCB1-207ENST00000491967 RFXAPO00287 272 aa9.61□□□□□ -0.87
SMARCB1-207ENST00000491967 MEIS1O00470 390 aa9.61□□□□□ -0.87
SMARCB1-207ENST00000491967 TLL1O43897 1013 aa9.61□□□□□ -0.87
SMARCB1-207ENST00000491967 CDC45O75419 566 aa9.61□□□□□ -0.87
SMARCB1-207ENST00000491967 ATG7O95352 703 aa9.61□□□□□ -0.87
SMARCB1-207ENST00000491967 FOSP01100 380 aaPredicted RBP9.61□□□□□ -0.87
SMARCB1-207ENST00000491967 IGFBP4P22692 258 aa9.61□□□□□ -0.87
SMARCB1-207ENST00000491967 THPOP40225 353 aa9.61□□□□□ -0.87
SMARCB1-207ENST00000491967 CLK2P49760 499 aaKnown RBP9.61□□□□□ -0.87
SMARCB1-207ENST00000491967 EVCP57679 992 aa9.61□□□□□ -0.87
SMARCB1-207ENST00000491967 MRPS5P82675 430 aaKnown RBP9.61□□□□□ -0.87
SMARCB1-207ENST00000491967 MTMR1Q13613 665 aa9.61□□□□□ -0.87
SMARCB1-207ENST00000491967 UBE2SQ16763 222 aa9.61□□□□□ -0.87
SMARCB1-207ENST00000491967 MARCH8Q5T0T0 291 aa9.61□□□□□ -0.87
SMARCB1-207ENST00000491967 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.61□□□□□ -0.87
SMARCB1-207ENST00000491967 TMCO2Q7Z6W1 182 aaPredicted RBP9.61□□□□□ -0.87
SMARCB1-207ENST00000491967 MICU3Q86XE3 530 aa9.61□□□□□ -0.87
SMARCB1-207ENST00000491967 TRIM50Q86XT4 487 aa9.61□□□□□ -0.87
SMARCB1-207ENST00000491967 LMBR1Q8WVP7 490 aa9.61□□□□□ -0.87
SMARCB1-207ENST00000491967 SEPT1Q8WYJ6 367 aa9.61□□□□□ -0.87
SMARCB1-207ENST00000491967 PCYT2Q99447 389 aa9.61□□□□□ -0.87
SMARCB1-207ENST00000491967 BARHL2Q9NY43 387 aa9.61□□□□□ -0.87
SMARCB1-207ENST00000491967 THEGQ9P2T0 379 aa9.61□□□□□ -0.87
SMARCB1-207ENST00000491967 ZNF215Q9UL58 517 aaPredicted RBP9.61□□□□□ -0.87
SMARCB1-207ENST00000491967 V9GY48 417 aaPredicted RBP9.61□□□□□ -0.87
SMARCB1-207ENST00000491967 NID2Q14112 1375 aa9.61□□□□□ -0.87
SMARCB1-207ENST00000491967 MYO7AQ13402 2215 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 NFASCO94856 1347 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 IGKV6D-21A0A0A0MT36 114 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 SPDYE3A6NKU9 549 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 STXBP3O00186 592 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 ZBTB43O43298 467 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 EPB41L2O43491 1005 aaKnown RBP9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 CHRNA1P02708 482 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 BMP1P13497 986 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 CDC27P30260 824 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 HSPA4P34932 840 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 TCF7P36402 384 aaPredicted RBP9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 SREBF1P36956 1147 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 GRB10Q13322 594 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 CCDC85BQ15834 202 aaPredicted RBP9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 RTN1Q16799 776 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 TAF2Q6P1X5 1199 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 SYNE3Q6ZMZ3 975 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 NIPA1Q7RTP0 329 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 HEATR3Q7Z4Q2 680 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 SPRED2Q7Z698 418 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 RAB11FIP4Q86YS3 637 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 CRIPAKQ8N1N5 446 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 CCDC82Q8N4S0 544 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 CYP2W1Q8TAV3 490 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 TOP1MTQ969P6 601 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 TCEANC2Q96MN5 208 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 MXRA8Q9BRK3 442 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 GLT8D2Q9H1C3 349 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 SUGCTQ9HAC7 445 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 KCNH7Q9NS40 1196 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 ERAP1Q9NZ08 941 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 INSL6Q9Y581 213 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 WDR81Q562E7 1941 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 LOXHD1Q8IVV2 1947 aa9.6□□□□□ -0.87
SMARCB1-207ENST00000491967 TCF20Q9UGU0 1960 aaKnown RBP9.59□□□□□ -0.87
SMARCB1-207ENST00000491967 COL4A4P53420 1690 aaPredicted RBP9.59□□□□□ -0.87
SMARCB1-207ENST00000491967 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.59□□□□□ -0.87
SMARCB1-207ENST00000491967 ESYT2A0FGR8 921 aa9.59□□□□□ -0.87
SMARCB1-207ENST00000491967 RBAK-RBAKDNI3L0D1 243 aa9.59□□□□□ -0.87
SMARCB1-207ENST00000491967 CYP3A4P08684 503 aa9.59□□□□□ -0.87
SMARCB1-207ENST00000491967 MGAT3Q09327 533 aa9.59□□□□□ -0.87
SMARCB1-207ENST00000491967 AP3B2Q13367 1082 aa9.59□□□□□ -0.87
SMARCB1-207ENST00000491967 PKN1Q16512 942 aa9.59□□□□□ -0.87
SMARCB1-207ENST00000491967 PFKFB3Q16875 520 aaPredicted RBP9.59□□□□□ -0.87
SMARCB1-207ENST00000491967 CEP55Q53EZ4 464 aa9.59□□□□□ -0.87
SMARCB1-207ENST00000491967 FAM43BQ6ZT52 329 aaPredicted RBP9.59□□□□□ -0.87
SMARCB1-207ENST00000491967 PLPPR4Q7Z2D5 763 aa9.59□□□□□ -0.87
SMARCB1-207ENST00000491967 ARNTL2Q8WYA1 636 aa9.59□□□□□ -0.87
SMARCB1-207ENST00000491967 SEPT8Q92599 483 aa9.59□□□□□ -0.87
SMARCB1-207ENST00000491967 APBB2Q92870 758 aa9.59□□□□□ -0.87
SMARCB1-207ENST00000491967 TGS1Q96RS0 853 aaKnown RBP9.59□□□□□ -0.87
SMARCB1-207ENST00000491967 ZMYND12Q9H0C1 365 aa9.59□□□□□ -0.87
SMARCB1-207ENST00000491967 SMARCAD1Q9H4L7 1026 aa9.59□□□□□ -0.87
SMARCB1-207ENST00000491967 CERS4Q9HA82 394 aa9.59□□□□□ -0.87
SMARCB1-207ENST00000491967 SQORQ9Y6N5 450 aa9.59□□□□□ -0.87
SMARCB1-207ENST00000491967 RALGAPA2Q2PPJ7 1873 aa9.58□□□□□ -0.88
SMARCB1-207ENST00000491967 MYH9P35579 1960 aaKnown RBP9.58□□□□□ -0.88
SMARCB1-207ENST00000491967 IGLV3-22A0A075B6J6 115 aa9.58□□□□□ -0.88
SMARCB1-207ENST00000491967 KLF18A0A0U1RQI7 1052 aa9.58□□□□□ -0.88
SMARCB1-207ENST00000491967 CCDC196A0A1B0GTZ2 297 aa9.58□□□□□ -0.88
SMARCB1-207ENST00000491967 SMCO2A6NFE2 343 aa9.58□□□□□ -0.88
SMARCB1-207ENST00000491967 RRN3P2A6NIE6 340 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms