RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 CLEC10AQ8IUN9 316 aa11.79□□□□□ -0.52
SNED1-211ENST00000491761 HOMEZQ8IX15 550 aa11.79□□□□□ -0.52
SNED1-211ENST00000491761 SELENOOQ9BVL4 669 aa11.79□□□□□ -0.52
SNED1-211ENST00000491761 AHDC1Q5TGY3 1603 aaPredicted RBP11.79□□□□□ -0.52
SNED1-211ENST00000491761 USP17L10C9JJH3 530 aa11.79□□□□□ -0.52
SNED1-211ENST00000491761 C2orf54Q08AI8 447 aa11.79□□□□□ -0.52
SNED1-211ENST00000491761 COASYQ13057 564 aa11.79□□□□□ -0.52
SNED1-211ENST00000491761 WDR93Q6P2C0 686 aa11.79□□□□□ -0.52
SNED1-211ENST00000491761 ADAT2Q7Z6V5 191 aaKnown RBP11.79□□□□□ -0.52
SNED1-211ENST00000491761 SLFN12Q8IYM2 578 aa11.79□□□□□ -0.52
SNED1-211ENST00000491761 CRAMP1Q96RY5 1269 aa11.79□□□□□ -0.52
SNED1-211ENST00000491761 EDEM3Q9BZQ6 932 aa11.79□□□□□ -0.52
SNED1-211ENST00000491761 JMJD4Q9H9V9 463 aa11.79□□□□□ -0.52
SNED1-211ENST00000491761 SUGCTQ9HAC7 445 aa11.79□□□□□ -0.52
SNED1-211ENST00000491761 PLAGL2Q9UPG8 496 aa11.79□□□□□ -0.52
SNED1-211ENST00000491761 SUGT1Q9Y2Z0 365 aa11.79□□□□□ -0.52
SNED1-211ENST00000491761 TARSL2A2RTX5 802 aaKnown RBP11.79□□□□□ -0.52
SNED1-211ENST00000491761 CEP104O60308 925 aa11.79□□□□□ -0.52
SNED1-211ENST00000491761 PLA2G4BP0C869 781 aa11.79□□□□□ -0.52
SNED1-211ENST00000491761 POLR2FP61218 127 aaKnown RBP11.79□□□□□ -0.52
SNED1-211ENST00000491761 GNGT1P63211 74 aa11.79□□□□□ -0.52
SNED1-211ENST00000491761 AMPD2Q01433 879 aa11.79□□□□□ -0.52
SNED1-211ENST00000491761 RASSF7Q02833 373 aa11.79□□□□□ -0.52
SNED1-211ENST00000491761 ASIC2Q16515 512 aa11.79□□□□□ -0.52
SNED1-211ENST00000491761 PPP4R3AQ6IN85 833 aa11.79□□□□□ -0.52
SNED1-211ENST00000491761 TTBK2Q6IQ55 1244 aa11.79□□□□□ -0.52
SNED1-211ENST00000491761 CCDC174Q6PII3 467 aa11.79□□□□□ -0.52
SNED1-211ENST00000491761 NLGN1Q8N2Q7 840 aa11.79□□□□□ -0.52
SNED1-211ENST00000491761 PPM1EQ8WY54 764 aa11.79□□□□□ -0.52
SNED1-211ENST00000491761 POLLQ9UGP5 575 aa11.79□□□□□ -0.52
SNED1-211ENST00000491761 DNM3Q9UQ16 869 aa11.79□□□□□ -0.52
SNED1-211ENST00000491761 CCDC160A6NGH7 325 aa11.78□□□□□ -0.52
SNED1-211ENST00000491761 E7EVH7 732 aa11.78□□□□□ -0.52
SNED1-211ENST00000491761 KLHL30Q0D2K2 578 aa11.78□□□□□ -0.52
SNED1-211ENST00000491761 TCP10Q12799 353 aa11.78□□□□□ -0.52
SNED1-211ENST00000491761 LLGL1Q15334 1064 aa11.78□□□□□ -0.52
SNED1-211ENST00000491761 SLFN13Q68D06 897 aa11.78□□□□□ -0.52
SNED1-211ENST00000491761 GOLGA5Q8TBA6 731 aa11.78□□□□□ -0.52
SNED1-211ENST00000491761 PNMA5Q96PV4 448 aa11.78□□□□□ -0.52
SNED1-211ENST00000491761 MTMR9Q96QG7 549 aa11.78□□□□□ -0.52
SNED1-211ENST00000491761 MMTAG2Q9BU76 263 aaKnown RBP11.78□□□□□ -0.52
SNED1-211ENST00000491761 MLXIPQ9HAP2 919 aa11.78□□□□□ -0.52
SNED1-211ENST00000491761 BLOC1S4Q9NUP1 217 aa11.78□□□□□ -0.52
SNED1-211ENST00000491761 ABCB11O95342 1321 aa11.78□□□□□ -0.52
SNED1-211ENST00000491761 ADAM9Q13443 819 aa11.78□□□□□ -0.52
SNED1-211ENST00000491761 SP8Q8IXZ3 490 aa11.78□□□□□ -0.52
SNED1-211ENST00000491761 H3BQF6 201 aa11.78□□□□□ -0.52
SNED1-211ENST00000491761 BUB1O43683 1085 aa11.78□□□□□ -0.52
SNED1-211ENST00000491761 BUB1BO60566 1050 aaPredicted RBP11.78□□□□□ -0.52
SNED1-211ENST00000491761 DESP17661 470 aa11.78□□□□□ -0.52
SNED1-211ENST00000491761 IFI16Q16666 785 aaKnown RBP11.78□□□□□ -0.52
SNED1-211ENST00000491761 CFAP221Q4G0U5 840 aa11.78□□□□□ -0.52
SNED1-211ENST00000491761 MCTP2Q6DN12 878 aa11.78□□□□□ -0.52
SNED1-211ENST00000491761 ZNF662Q6ZS27 426 aa11.78□□□□□ -0.52
SNED1-211ENST00000491761 CCDC91Q7Z6B0 441 aa11.78□□□□□ -0.52
SNED1-211ENST00000491761 NIM1KQ8IY84 436 aa11.78□□□□□ -0.52
SNED1-211ENST00000491761 EHMT1Q9H9B1 1298 aa11.78□□□□□ -0.52
SNED1-211ENST00000491761 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.78□□□□□ -0.52
SNED1-211ENST00000491761 GAKO14976 1311 aa11.78□□□□□ -0.52
SNED1-211ENST00000491761 MMP10P09238 476 aa11.77□□□□□ -0.52
SNED1-211ENST00000491761 MXRA7P84157 204 aa11.77□□□□□ -0.52
SNED1-211ENST00000491761 CERKLQ49MI3 558 aaPredicted RBP11.77□□□□□ -0.52
SNED1-211ENST00000491761 ARFGAP2Q8N6H7 521 aa11.77□□□□□ -0.52
SNED1-211ENST00000491761 ANKS4BQ8N8V4 417 aa11.77□□□□□ -0.52
SNED1-211ENST00000491761 CEP63Q96MT8 703 aa11.77□□□□□ -0.52
SNED1-211ENST00000491761 FAM204AQ9H8W3 233 aa11.77□□□□□ -0.52
SNED1-211ENST00000491761 FAM184BQ9ULE4 1060 aa11.77□□□□□ -0.52
SNED1-211ENST00000491761 SNX12Q9UMY4 172 aa11.77□□□□□ -0.52
SNED1-211ENST00000491761 PHLPP1O60346 1717 aa11.77□□□□□ -0.52
SNED1-211ENST00000491761 COL16A1Q07092 1604 aaPredicted RBP11.77□□□□□ -0.52
SNED1-211ENST00000491761 CASZ1Q86V15 1759 aa11.77□□□□□ -0.52
SNED1-211ENST00000491761 E9PMD0 336 aa11.77□□□□□ -0.53
SNED1-211ENST00000491761 ZNF185O15231 689 aa11.77□□□□□ -0.53
SNED1-211ENST00000491761 RPL13P26373 211 aaKnown RBP11.77□□□□□ -0.53
SNED1-211ENST00000491761 ACTN2P35609 894 aa11.77□□□□□ -0.53
SNED1-211ENST00000491761 CLNS1AP54105 237 aaKnown RBP11.77□□□□□ -0.53
SNED1-211ENST00000491761 CACNB1Q02641 598 aaPredicted RBP11.77□□□□□ -0.53
SNED1-211ENST00000491761 COBLL1Q53SF7 1204 aa11.77□□□□□ -0.53
SNED1-211ENST00000491761 PRR16Q569H4 304 aa11.77□□□□□ -0.53
SNED1-211ENST00000491761 MIIPQ5JXC2 388 aa11.77□□□□□ -0.53
SNED1-211ENST00000491761 PDXDC1Q6P996 788 aa11.77□□□□□ -0.53
SNED1-211ENST00000491761 HOMER2Q9NSB8 354 aa11.77□□□□□ -0.53
SNED1-211ENST00000491761 EMILIN3Q9NT22 766 aa11.77□□□□□ -0.53
SNED1-211ENST00000491761 STK24Q9Y6E0 443 aa11.77□□□□□ -0.53
SNED1-211ENST00000491761 DUSP10Q9Y6W6 482 aa11.77□□□□□ -0.53
SNED1-211ENST00000491761 SERPING1P05155 500 aa11.77□□□□□ -0.53
SNED1-211ENST00000491761 PLEKP08567 350 aaPredicted RBP11.77□□□□□ -0.53
SNED1-211ENST00000491761 ALDH1B1P30837 517 aa11.77□□□□□ -0.53
SNED1-211ENST00000491761 CXCR5P32302 372 aa11.77□□□□□ -0.53
SNED1-211ENST00000491761 FLAD1Q8NFF5 587 aa11.77□□□□□ -0.53
SNED1-211ENST00000491761 MGARPQ8TDB4 240 aa11.77□□□□□ -0.53
SNED1-211ENST00000491761 ANO3Q9BYT9 981 aa11.77□□□□□ -0.53
SNED1-211ENST00000491761 SH2D4AQ9H788 454 aa11.77□□□□□ -0.53
SNED1-211ENST00000491761 KANSL2Q9H9L4 492 aa11.77□□□□□ -0.53
SNED1-211ENST00000491761 CEP72Q9P209 647 aa11.77□□□□□ -0.53
SNED1-211ENST00000491761 USP17L15C9J2P7 530 aa11.76□□□□□ -0.53
SNED1-211ENST00000491761 USP17L13C9JLJ4 530 aa11.76□□□□□ -0.53
SNED1-211ENST00000491761 USP17L11C9JVI0 530 aa11.76□□□□□ -0.53
SNED1-211ENST00000491761 USP17L18D6R9N7 530 aa11.76□□□□□ -0.53
SNED1-211ENST00000491761 USP17L22D6RA61 530 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms