RNA–Protein interactions for RNA: ENST00000491701.1

CLIP4-211, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-211ENST00000491701 PTH1RQ03431 593 aa5.34□□□□□ -1.55
CLIP4-211ENST00000491701 POU5F1BQ06416 359 aa5.34□□□□□ -1.55
CLIP4-211ENST00000491701 CHRNDQ07001 517 aa5.34□□□□□ -1.55
CLIP4-211ENST00000491701 SSRP1Q08945 709 aaKnown RBP5.34□□□□□ -1.55
CLIP4-211ENST00000491701 CAMK2GQ13555 558 aaPredicted RBP5.34□□□□□ -1.55
CLIP4-211ENST00000491701 SETDB1Q15047 1291 aa5.34□□□□□ -1.55
CLIP4-211ENST00000491701 GPR162Q16538 588 aa5.34□□□□□ -1.55
CLIP4-211ENST00000491701 WDR78Q5VTH9 848 aa5.34□□□□□ -1.55
CLIP4-211ENST00000491701 LARP1BQ659C4 914 aaKnown RBP5.34□□□□□ -1.55
CLIP4-211ENST00000491701 HGSNATQ68CP4 663 aa5.34□□□□□ -1.55
CLIP4-211ENST00000491701 LDHAL6AQ6ZMR3 332 aa5.34□□□□□ -1.55
CLIP4-211ENST00000491701 C15orf52Q6ZUT6 534 aaKnown RBP5.34□□□□□ -1.55
CLIP4-211ENST00000491701 SV2BQ7L1I2 683 aa5.34□□□□□ -1.55
CLIP4-211ENST00000491701 NBPF5PQ86XG9 351 aaPredicted RBP5.34□□□□□ -1.55
CLIP4-211ENST00000491701 CACTIN-AS1Q8N1I8 211 aa5.34□□□□□ -1.55
CLIP4-211ENST00000491701 ZSWIM2Q8NEG5 633 aa5.34□□□□□ -1.55
CLIP4-211ENST00000491701 OR6P1Q8NGX9 317 aa5.34□□□□□ -1.55
CLIP4-211ENST00000491701 TTC8Q8TAM2 541 aa5.34□□□□□ -1.55
CLIP4-211ENST00000491701 PPM1EQ8WY54 764 aa5.34□□□□□ -1.55
CLIP4-211ENST00000491701 CRAMP1Q96RY5 1269 aa5.34□□□□□ -1.55
CLIP4-211ENST00000491701 HAUS7Q99871 368 aa5.34□□□□□ -1.55
CLIP4-211ENST00000491701 BHLHE41Q9C0J9 482 aaPredicted RBP5.34□□□□□ -1.55
CLIP4-211ENST00000491701 ADAM19Q9H013 955 aa5.34□□□□□ -1.55
CLIP4-211ENST00000491701 LSG1Q9H089 658 aaKnown RBP5.34□□□□□ -1.55
CLIP4-211ENST00000491701 TNKS2Q9H2K2 1166 aa5.34□□□□□ -1.55
CLIP4-211ENST00000491701 BOLA2Q9H3K6 86 aa5.34□□□□□ -1.55
CLIP4-211ENST00000491701 PIH1D3Q9NQM4 214 aaKnown RBP5.34□□□□□ -1.55
CLIP4-211ENST00000491701 TFCP2L1Q9NZI6 479 aa5.34□□□□□ -1.55
CLIP4-211ENST00000491701 ZMYM5Q9UJ78 669 aa5.34□□□□□ -1.55
CLIP4-211ENST00000491701 PPM1HQ9ULR3 514 aa5.34□□□□□ -1.55
CLIP4-211ENST00000491701 TLR6Q9Y2C9 796 aa5.34□□□□□ -1.55
CLIP4-211ENST00000491701 COL4A5P29400 1685 aa5.34□□□□□ -1.55
CLIP4-211ENST00000491701 ZNF804BA4D1E1 1349 aa5.34□□□□□ -1.55
CLIP4-211ENST00000491701 CDK5RAP2Q96SN8 1893 aa5.34□□□□□ -1.56
CLIP4-211ENST00000491701 TCRBV5S4A2TA0A5A2 114 aa5.33□□□□□ -1.56
CLIP4-211ENST00000491701 NRDCO43847 1150 aa5.33□□□□□ -1.56
CLIP4-211ENST00000491701 CD53P19397 219 aa5.33□□□□□ -1.56
CLIP4-211ENST00000491701 MCAMP43121 646 aa5.33□□□□□ -1.56
CLIP4-211ENST00000491701 PRELPP51888 382 aa5.33□□□□□ -1.56
CLIP4-211ENST00000491701 C1QTNF8P60827 252 aa5.33□□□□□ -1.56
CLIP4-211ENST00000491701 PCDH1Q08174 1060 aa5.33□□□□□ -1.56
CLIP4-211ENST00000491701 CCDC57Q2TAC2 916 aa5.33□□□□□ -1.56
CLIP4-211ENST00000491701 SEZ6Q53EL9 994 aa5.33□□□□□ -1.56
CLIP4-211ENST00000491701 MCTP1Q6DN14 999 aa5.33□□□□□ -1.56
CLIP4-211ENST00000491701 VN1R5Q7Z5H4 357 aa5.33□□□□□ -1.56
CLIP4-211ENST00000491701 FBXO11Q86XK2 927 aa5.33□□□□□ -1.56
CLIP4-211ENST00000491701 ERC1Q8IUD2 1116 aa5.33□□□□□ -1.56
CLIP4-211ENST00000491701 AMOTL1Q8IY63 956 aa5.33□□□□□ -1.56
CLIP4-211ENST00000491701 UBR7Q8N806 425 aa5.33□□□□□ -1.56
CLIP4-211ENST00000491701 GALNT11Q8NCW6 608 aa5.33□□□□□ -1.56
CLIP4-211ENST00000491701 GLIS3Q8NEA6 775 aa5.33□□□□□ -1.56
CLIP4-211ENST00000491701 ST13P5Q8NFI4 369 aaPredicted RBP5.33□□□□□ -1.56
CLIP4-211ENST00000491701 SVIPQ8NHG7 77 aa5.33□□□□□ -1.56
CLIP4-211ENST00000491701 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.33□□□□□ -1.56
CLIP4-211ENST00000491701 KLHDC7BQ96G42 594 aa5.33□□□□□ -1.56
CLIP4-211ENST00000491701 FAM227BQ96M60 508 aa5.33□□□□□ -1.56
CLIP4-211ENST00000491701 TBC1D32Q96NH3 1257 aa5.33□□□□□ -1.56
CLIP4-211ENST00000491701 GPR101Q96P66 508 aaPredicted RBP5.33□□□□□ -1.56
CLIP4-211ENST00000491701 SEC62Q99442 399 aaKnown RBP5.33□□□□□ -1.56
CLIP4-211ENST00000491701 MTA3Q9BTC8 594 aa5.33□□□□□ -1.56
CLIP4-211ENST00000491701 BRIP1Q9BX63 1249 aa5.33□□□□□ -1.56
CLIP4-211ENST00000491701 ABCB6Q9NP58 842 aa5.33□□□□□ -1.56
CLIP4-211ENST00000491701 ZIM2Q9NZV7 527 aa5.33□□□□□ -1.56
CLIP4-211ENST00000491701 HMG20BQ9P0W2 317 aa5.33□□□□□ -1.56
CLIP4-211ENST00000491701 POLLQ9UGP5 575 aa5.33□□□□□ -1.56
CLIP4-211ENST00000491701 GPN3Q9UHW5 284 aaPredicted RBP5.33□□□□□ -1.56
CLIP4-211ENST00000491701 PALD1Q9ULE6 856 aa5.33□□□□□ -1.56
CLIP4-211ENST00000491701 SOX13Q9UN79 622 aa5.33□□□□□ -1.56
CLIP4-211ENST00000491701 ZNF652Q9Y2D9 606 aa5.33□□□□□ -1.56
CLIP4-211ENST00000491701 SOX1O00570 391 aaPredicted RBP5.32□□□□□ -1.56
CLIP4-211ENST00000491701 SGSM2O43147 1006 aa5.32□□□□□ -1.56
CLIP4-211ENST00000491701 AKAP10O43572 662 aa5.32□□□□□ -1.56
CLIP4-211ENST00000491701 FBXO24O75426 580 aa5.32□□□□□ -1.56
CLIP4-211ENST00000491701 CHRNA5P30532 468 aa5.32□□□□□ -1.56
CLIP4-211ENST00000491701 CD68P34810 354 aaPredicted RBP5.32□□□□□ -1.56
CLIP4-211ENST00000491701 LIG3P49916 1009 aa5.32□□□□□ -1.56
CLIP4-211ENST00000491701 C19orf57Q0VDD7 668 aa5.32□□□□□ -1.56
CLIP4-211ENST00000491701 GRAPQ13588 217 aa5.32□□□□□ -1.56
CLIP4-211ENST00000491701 ATP2B3Q16720 1220 aa5.32□□□□□ -1.56
CLIP4-211ENST00000491701 FER1L6Q2WGJ9 1857 aa5.32□□□□□ -1.56
CLIP4-211ENST00000491701 CCDC88AQ3V6T2 1871 aa5.32□□□□□ -1.56
CLIP4-211ENST00000491701 CCDC152Q4G0S7 254 aa5.32□□□□□ -1.56
CLIP4-211ENST00000491701 C10orf62Q5T681 223 aaPredicted RBP5.32□□□□□ -1.56
CLIP4-211ENST00000491701 FBXW10Q5XX13 1052 aa5.32□□□□□ -1.56
CLIP4-211ENST00000491701 WWC2Q6AWC2 1192 aa5.32□□□□□ -1.56
CLIP4-211ENST00000491701 RNF180Q86T96 592 aa5.32□□□□□ -1.56
CLIP4-211ENST00000491701 CLASRPQ8N2M8 674 aaKnown RBP5.32□□□□□ -1.56
CLIP4-211ENST00000491701 DTWD1Q8N5C7 304 aa5.32□□□□□ -1.56
CLIP4-211ENST00000491701 FLAD1Q8NFF5 587 aa5.32□□□□□ -1.56
CLIP4-211ENST00000491701 ATL2Q8NHH9 583 aa5.32□□□□□ -1.56
CLIP4-211ENST00000491701 GRAPLQ8TC17 118 aaPredicted RBP5.32□□□□□ -1.56
CLIP4-211ENST00000491701 ZNF669Q96BR6 464 aaPredicted RBP5.32□□□□□ -1.56
CLIP4-211ENST00000491701 FERD3LQ96RJ6 166 aa5.32□□□□□ -1.56
CLIP4-211ENST00000491701 NYXQ9GZU5 481 aa5.32□□□□□ -1.56
CLIP4-211ENST00000491701 CLEC4MQ9H2X3 399 aaPredicted RBP5.32□□□□□ -1.56
CLIP4-211ENST00000491701 CASS4Q9NQ75 786 aa5.32□□□□□ -1.56
CLIP4-211ENST00000491701 MROH5Q6ZUA9 1318 aa5.32□□□□□ -1.56
CLIP4-211ENST00000491701 PSME4Q14997 1843 aa5.32□□□□□ -1.56
CLIP4-211ENST00000491701 C10orf71Q711Q0 1435 aa5.32□□□□□ -1.56
CLIP4-211ENST00000491701 A0A0D9SFI3 127 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms