RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 TTC28Q96AY4 2481 aa14.52□□□□□ -0.08
SEC61A1-206ENST00000491668 SMCO2A6NFE2 343 aa14.52□□□□□ -0.09
SEC61A1-206ENST00000491668 PPFIA3O75145 1194 aa14.52□□□□□ -0.09
SEC61A1-206ENST00000491668 TCF7P36402 384 aaPredicted RBP14.52□□□□□ -0.09
SEC61A1-206ENST00000491668 RBM25P49756 843 aaKnown RBP14.52□□□□□ -0.09
SEC61A1-206ENST00000491668 ADCY7P51828 1080 aa14.52□□□□□ -0.09
SEC61A1-206ENST00000491668 MKRN4PQ13434 485 aaPredicted RBP14.52□□□□□ -0.09
SEC61A1-206ENST00000491668 MTMR1Q13613 665 aa14.52□□□□□ -0.09
SEC61A1-206ENST00000491668 PFKFB3Q16875 520 aaPredicted RBP14.52□□□□□ -0.09
SEC61A1-206ENST00000491668 UTP14CQ5TAP6 766 aaKnown RBP14.52□□□□□ -0.09
SEC61A1-206ENST00000491668 TMCO2Q7Z6W1 182 aaPredicted RBP14.52□□□□□ -0.09
SEC61A1-206ENST00000491668 CRYGNQ8WXF5 182 aa14.52□□□□□ -0.09
SEC61A1-206ENST00000491668 ATP6V0A1Q93050 837 aa14.52□□□□□ -0.09
SEC61A1-206ENST00000491668 TM6SF1Q9BZW5 370 aa14.52□□□□□ -0.09
SEC61A1-206ENST00000491668 ZSWIM6Q9HCJ5 1215 aa14.52□□□□□ -0.09
SEC61A1-206ENST00000491668 KCNH7Q9NS40 1196 aa14.52□□□□□ -0.09
SEC61A1-206ENST00000491668 SETD4Q9NVD3 440 aa14.52□□□□□ -0.09
SEC61A1-206ENST00000491668 NAP1L2Q9ULW6 460 aaPredicted RBP14.52□□□□□ -0.09
SEC61A1-206ENST00000491668 C17orf102A2RUQ5 167 aa14.51□□□□□ -0.09
SEC61A1-206ENST00000491668 ARP10275 920 aa14.51□□□□□ -0.09
SEC61A1-206ENST00000491668 ACTN1P12814 892 aa14.51□□□□□ -0.09
SEC61A1-206ENST00000491668 SCG2P13521 617 aa14.51□□□□□ -0.09
SEC61A1-206ENST00000491668 PDIA3P30101 505 aaKnown RBP14.51□□□□□ -0.09
SEC61A1-206ENST00000491668 WDR5P61964 334 aaKnown RBP14.51□□□□□ -0.09
SEC61A1-206ENST00000491668 ITGB3BPQ13352 177 aaPredicted RBP14.51□□□□□ -0.09
SEC61A1-206ENST00000491668 TOB2Q14106 344 aaPredicted RBP14.51□□□□□ -0.09
SEC61A1-206ENST00000491668 RUFY3Q7L099 469 aa14.51□□□□□ -0.09
SEC61A1-206ENST00000491668 SPRED2Q7Z698 418 aa14.51□□□□□ -0.09
SEC61A1-206ENST00000491668 HERC6Q8IVU3 1022 aa14.51□□□□□ -0.09
SEC61A1-206ENST00000491668 TEX2Q8IWB9 1127 aa14.51□□□□□ -0.09
SEC61A1-206ENST00000491668 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.51□□□□□ -0.09
SEC61A1-206ENST00000491668 GIMAP8Q8ND71 665 aaPredicted RBP14.51□□□□□ -0.09
SEC61A1-206ENST00000491668 LMBR1Q8WVP7 490 aa14.51□□□□□ -0.09
SEC61A1-206ENST00000491668 PHKBQ93100 1093 aa14.51□□□□□ -0.09
SEC61A1-206ENST00000491668 CDHR1Q96JP9 859 aa14.51□□□□□ -0.09
SEC61A1-206ENST00000491668 TBC1D32Q96NH3 1257 aa14.51□□□□□ -0.09
SEC61A1-206ENST00000491668 PCYT2Q99447 389 aa14.51□□□□□ -0.09
SEC61A1-206ENST00000491668 MXRA8Q9BRK3 442 aa14.51□□□□□ -0.09
SEC61A1-206ENST00000491668 ANO3Q9BYT9 981 aa14.51□□□□□ -0.09
SEC61A1-206ENST00000491668 UPF3BQ9BZI7 483 aaKnown RBP14.51□□□□□ -0.09
SEC61A1-206ENST00000491668 NCOA5Q9HCD5 579 aaKnown RBP14.51□□□□□ -0.09
SEC61A1-206ENST00000491668 XIRP2A4UGR9 3374 aa14.51□□□□□ -0.09
SEC61A1-206ENST00000491668 hCG_1984214I3L0E3 225 aa14.5□□□□□ -0.09
SEC61A1-206ENST00000491668 MEIS1O00470 390 aa14.5□□□□□ -0.09
SEC61A1-206ENST00000491668 BAIAP3O94812 1187 aa14.5□□□□□ -0.09
SEC61A1-206ENST00000491668 FOSP01100 380 aaPredicted RBP14.5□□□□□ -0.09
SEC61A1-206ENST00000491668 CA3P07451 260 aa14.5□□□□□ -0.09
SEC61A1-206ENST00000491668 SREBF1P36956 1147 aa14.5□□□□□ -0.09
SEC61A1-206ENST00000491668 THPOP40225 353 aa14.5□□□□□ -0.09
SEC61A1-206ENST00000491668 DEFB103AP81534 67 aa14.5□□□□□ -0.09
SEC61A1-206ENST00000491668 CNKSR3Q6P9H4 555 aa14.5□□□□□ -0.09
SEC61A1-206ENST00000491668 ZNF713Q8N859 430 aaPredicted RBP14.5□□□□□ -0.09
SEC61A1-206ENST00000491668 PHOSPHO2Q8TCD6 241 aa14.5□□□□□ -0.09
SEC61A1-206ENST00000491668 SLC9A7Q96T83 725 aa14.5□□□□□ -0.09
SEC61A1-206ENST00000491668 SLC28A3Q9HAS3 691 aa14.5□□□□□ -0.09
SEC61A1-206ENST00000491668 PDRG1Q9NUG6 133 aa14.5□□□□□ -0.09
SEC61A1-206ENST00000491668 CCDC196A0A1B0GTZ2 297 aa14.49□□□□□ -0.09
SEC61A1-206ENST00000491668 EPOPA6NHQ4 379 aa14.49□□□□□ -0.09
SEC61A1-206ENST00000491668 FAM86B1E9PN63 330 aa14.49□□□□□ -0.09
SEC61A1-206ENST00000491668 MAFGO15525 162 aa14.49□□□□□ -0.09
SEC61A1-206ENST00000491668 PRPF3O43395 683 aaKnown RBP14.49□□□□□ -0.09
SEC61A1-206ENST00000491668 PARNO95453 639 aaKnown RBP14.49□□□□□ -0.09
SEC61A1-206ENST00000491668 FAM86B2P0C5J1 330 aa14.49□□□□□ -0.09
SEC61A1-206ENST00000491668 NEK4P51957 841 aa14.49□□□□□ -0.09
SEC61A1-206ENST00000491668 CEP55Q53EZ4 464 aa14.49□□□□□ -0.09
SEC61A1-206ENST00000491668 JAKMIP3Q5VZ66 844 aa14.49□□□□□ -0.09
SEC61A1-206ENST00000491668 SEPT1Q8WYJ6 367 aa14.49□□□□□ -0.09
SEC61A1-206ENST00000491668 LARP6Q9BRS8 491 aaKnown RBP14.49□□□□□ -0.09
SEC61A1-206ENST00000491668 ZMYND12Q9H0C1 365 aa14.49□□□□□ -0.09
SEC61A1-206ENST00000491668 AGO4Q9HCK5 861 aaKnown RBP14.49□□□□□ -0.09
SEC61A1-206ENST00000491668 IGLV3-22A0A075B6J6 115 aa14.48□□□□□ -0.09
SEC61A1-206ENST00000491668 ESYT2A0FGR8 921 aa14.48□□□□□ -0.09
SEC61A1-206ENST00000491668 LCHNA4D1U4 455 aa14.48□□□□□ -0.09
SEC61A1-206ENST00000491668 RSPH10B2B2RC85 870 aa14.48□□□□□ -0.09
SEC61A1-206ENST00000491668 DLL1O00548 723 aa14.48□□□□□ -0.09
SEC61A1-206ENST00000491668 EDIL3O43854 480 aa14.48□□□□□ -0.09
SEC61A1-206ENST00000491668 LGR5O75473 907 aa14.48□□□□□ -0.09
SEC61A1-206ENST00000491668 CCNE2O96020 404 aa14.48□□□□□ -0.09
SEC61A1-206ENST00000491668 RSPH10BP0C881 870 aa14.48□□□□□ -0.09
SEC61A1-206ENST00000491668 MARK3P27448 753 aa14.48□□□□□ -0.09
SEC61A1-206ENST00000491668 CCT2P78371 535 aaKnown RBP14.48□□□□□ -0.09
SEC61A1-206ENST00000491668 ARHGAP4P98171 946 aa14.48□□□□□ -0.09
SEC61A1-206ENST00000491668 TAP1Q03518 808 aa14.48□□□□□ -0.09
SEC61A1-206ENST00000491668 AP3B2Q13367 1082 aa14.48□□□□□ -0.09
SEC61A1-206ENST00000491668 MARCH8Q5T0T0 291 aa14.48□□□□□ -0.09
SEC61A1-206ENST00000491668 PPP2R2DQ66LE6 453 aa14.48□□□□□ -0.09
SEC61A1-206ENST00000491668 RUFY4Q6ZNE9 571 aa14.48□□□□□ -0.09
SEC61A1-206ENST00000491668 ZBTB10Q96DT7 871 aa14.48□□□□□ -0.09
SEC61A1-206ENST00000491668 JPH1Q9HDC5 661 aaPredicted RBP14.48□□□□□ -0.09
SEC61A1-206ENST00000491668 ZNF215Q9UL58 517 aaPredicted RBP14.48□□□□□ -0.09
SEC61A1-206ENST00000491668 NFASCO94856 1347 aa14.47□□□□□ -0.09
SEC61A1-206ENST00000491668 NRCAMQ92823 1304 aa14.47□□□□□ -0.09
SEC61A1-206ENST00000491668 ABHD14A-ACY1A0A1B0GW23 586 aa14.47□□□□□ -0.09
SEC61A1-206ENST00000491668 RFXAPO00287 272 aa14.47□□□□□ -0.09
SEC61A1-206ENST00000491668 DHX15O43143 795 aaKnown RBP14.47□□□□□ -0.09
SEC61A1-206ENST00000491668 CYP3A4P08684 503 aa14.47□□□□□ -0.09
SEC61A1-206ENST00000491668 CTSHP09668 335 aa14.47□□□□□ -0.09
SEC61A1-206ENST00000491668 IFNAR1P17181 557 aa14.47□□□□□ -0.09
SEC61A1-206ENST00000491668 ACTR2P61160 394 aa14.47□□□□□ -0.09
SEC61A1-206ENST00000491668 RABEP1Q15276 862 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms