RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 CDKL5O76039 1030 aa17.19■□□□□ 0.34
USP39-217ENST00000491659 DEXIO95424 95 aa17.19■□□□□ 0.34
USP39-217ENST00000491659 HOXC8P31273 242 aa17.19■□□□□ 0.34
USP39-217ENST00000491659 HIC1Q14526 733 aa17.19■□□□□ 0.34
USP39-217ENST00000491659 NIPA1Q7RTP0 329 aa17.19■□□□□ 0.34
USP39-217ENST00000491659 SERINC5Q86VE9 423 aa17.19■□□□□ 0.34
USP39-217ENST00000491659 CYP2W1Q8TAV3 490 aa17.19■□□□□ 0.34
USP39-217ENST00000491659 GLG1Q92896 1179 aa17.19■□□□□ 0.34
USP39-217ENST00000491659 TIFAQ96CG3 184 aa17.19■□□□□ 0.34
USP39-217ENST00000491659 VWCEQ96DN2 955 aa17.19■□□□□ 0.34
USP39-217ENST00000491659 GUCD1Q96NT3 240 aa17.19■□□□□ 0.34
USP39-217ENST00000491659 PBX4Q9BYU1 374 aa17.19■□□□□ 0.34
USP39-217ENST00000491659 SEMA6BQ9H3T3 888 aa17.19■□□□□ 0.34
USP39-217ENST00000491659 AGO4Q9HCK5 861 aaKnown RBP17.19■□□□□ 0.34
USP39-217ENST00000491659 ERAP1Q9NZ08 941 aa17.19■□□□□ 0.34
USP39-217ENST00000491659 MSRAQ9UJ68 235 aa17.19■□□□□ 0.34
USP39-217ENST00000491659 EMSYQ7Z589 1322 aa17.19■□□□□ 0.34
USP39-217ENST00000491659 GSTTP1A0A1W2PQM5 241 aa17.18■□□□□ 0.34
USP39-217ENST00000491659 GRXCR1A8MXD5 290 aa17.18■□□□□ 0.34
USP39-217ENST00000491659 BAIAP3O94812 1187 aa17.18■□□□□ 0.34
USP39-217ENST00000491659 CYP3A4P08684 503 aa17.18■□□□□ 0.34
USP39-217ENST00000491659 ARP10275 920 aa17.18■□□□□ 0.34
USP39-217ENST00000491659 THPOP40225 353 aa17.18■□□□□ 0.34
USP39-217ENST00000491659 NLRP5P59047 1200 aa17.18■□□□□ 0.34
USP39-217ENST00000491659 SETQ01105 290 aaPredicted RBP17.18■□□□□ 0.34
USP39-217ENST00000491659 ANKRD1Q15327 319 aa17.18■□□□□ 0.34
USP39-217ENST00000491659 TRIM71Q2Q1W2 868 aaKnown RBP17.18■□□□□ 0.34
USP39-217ENST00000491659 PLA2G4DQ86XP0 818 aa17.18■□□□□ 0.34
USP39-217ENST00000491659 WNT8BQ93098 351 aa17.18■□□□□ 0.34
USP39-217ENST00000491659 SLKQ9H2G2 1235 aaPredicted RBP17.18■□□□□ 0.34
USP39-217ENST00000491659 TTYH1Q9H313 450 aaPredicted RBP17.18■□□□□ 0.34
USP39-217ENST00000491659 RNPEPQ9H4A4 650 aa17.18■□□□□ 0.34
USP39-217ENST00000491659 SMARCAD1Q9H4L7 1026 aa17.18■□□□□ 0.34
USP39-217ENST00000491659 AZI2Q9H6S1 392 aa17.18■□□□□ 0.34
USP39-217ENST00000491659 SETD4Q9NVD3 440 aa17.18■□□□□ 0.34
USP39-217ENST00000491659 TET1Q8NFU7 2136 aa17.18■□□□□ 0.34
USP39-217ENST00000491659 MEIS1O00470 390 aa17.17■□□□□ 0.34
USP39-217ENST00000491659 ATP2A2P16615 1042 aaKnown RBP17.17■□□□□ 0.34
USP39-217ENST00000491659 MARK3P27448 753 aa17.17■□□□□ 0.34
USP39-217ENST00000491659 PBX2P40425 430 aa17.17■□□□□ 0.34
USP39-217ENST00000491659 ZNF618Q5T7W0 954 aa17.17■□□□□ 0.34
USP39-217ENST00000491659 RASGRP4Q8TDF6 673 aa17.17■□□□□ 0.34
USP39-217ENST00000491659 CRYGNQ8WXF5 182 aa17.17■□□□□ 0.34
USP39-217ENST00000491659 SLC9A7Q96T83 725 aa17.17■□□□□ 0.34
USP39-217ENST00000491659 PTPRSQ13332 1948 aa17.17■□□□□ 0.34
USP39-217ENST00000491659 NRCAMQ92823 1304 aa17.17■□□□□ 0.34
USP39-217ENST00000491659 LAMA2P24043 3122 aaKnown RBP17.16■□□□□ 0.34
USP39-217ENST00000491659 FAM86B1E9PN63 330 aa17.16■□□□□ 0.34
USP39-217ENST00000491659 TREHO43280 583 aa17.16■□□□□ 0.34
USP39-217ENST00000491659 CAND2O75155 1236 aa17.16■□□□□ 0.34
USP39-217ENST00000491659 FAM86B2P0C5J1 330 aa17.16■□□□□ 0.34
USP39-217ENST00000491659 KCNJ6P48051 423 aa17.16■□□□□ 0.34
USP39-217ENST00000491659 ACTR2P61160 394 aa17.16■□□□□ 0.34
USP39-217ENST00000491659 SCRN1Q12765 414 aa17.16■□□□□ 0.34
USP39-217ENST00000491659 PPFIA1Q13136 1202 aa17.16■□□□□ 0.34
USP39-217ENST00000491659 ITGB3BPQ13352 177 aaPredicted RBP17.16■□□□□ 0.34
USP39-217ENST00000491659 CNKSR3Q6P9H4 555 aa17.16■□□□□ 0.34
USP39-217ENST00000491659 FAM177A1Q8N128 213 aaPredicted RBP17.16■□□□□ 0.34
USP39-217ENST00000491659 LMBR1Q8WVP7 490 aa17.16■□□□□ 0.34
USP39-217ENST00000491659 CDX2Q99626 313 aaPredicted RBP17.16■□□□□ 0.34
USP39-217ENST00000491659 ZNF576Q9H609 170 aa17.16■□□□□ 0.34
USP39-217ENST00000491659 TCEAL9Q9UHQ7 104 aa17.16■□□□□ 0.34
USP39-217ENST00000491659 IGLV3-22A0A075B6J6 115 aa17.15■□□□□ 0.34
USP39-217ENST00000491659 RSPH10B2B2RC85 870 aa17.15■□□□□ 0.34
USP39-217ENST00000491659 DDX39AO00148 427 aaKnown RBP17.15■□□□□ 0.34
USP39-217ENST00000491659 ADAMTS3O15072 1205 aa17.15■□□□□ 0.34
USP39-217ENST00000491659 PFKFB2O60825 505 aa17.15■□□□□ 0.34
USP39-217ENST00000491659 NBNO60934 754 aa17.15■□□□□ 0.34
USP39-217ENST00000491659 LGR5O75473 907 aa17.15■□□□□ 0.34
USP39-217ENST00000491659 CXCL10P02778 98 aa17.15■□□□□ 0.34
USP39-217ENST00000491659 RSPH10BP0C881 870 aa17.15■□□□□ 0.34
USP39-217ENST00000491659 AK2P54819 239 aa17.15■□□□□ 0.34
USP39-217ENST00000491659 TNPO1Q92973 898 aaKnown RBP17.15■□□□□ 0.34
USP39-217ENST00000491659 IL17RAQ96F46 866 aa17.15■□□□□ 0.34
USP39-217ENST00000491659 ZNF577Q9BSK1 485 aa17.15■□□□□ 0.34
USP39-217ENST00000491659 C22orf23Q9BZE7 217 aa17.15■□□□□ 0.34
USP39-217ENST00000491659 TPCN1Q9ULQ1 816 aa17.15■□□□□ 0.34
USP39-217ENST00000491659 PCDHA4Q9UN74 947 aa17.15■□□□□ 0.34
USP39-217ENST00000491659 STK36Q9NRP7 1315 aa17.15■□□□□ 0.34
USP39-217ENST00000491659 IPO5O00410 1097 aaKnown RBP17.14■□□□□ 0.33
USP39-217ENST00000491659 CTSHP09668 335 aa17.14■□□□□ 0.33
USP39-217ENST00000491659 GRIK4Q16099 956 aa17.14■□□□□ 0.33
USP39-217ENST00000491659 TRAF7Q6Q0C0 670 aa17.14■□□□□ 0.33
USP39-217ENST00000491659 PHOSPHO2Q8TCD6 241 aa17.14■□□□□ 0.33
USP39-217ENST00000491659 NKX2-4Q9H2Z4 354 aa17.14■□□□□ 0.33
USP39-217ENST00000491659 TUBE1Q9UJT0 475 aa17.14■□□□□ 0.33
USP39-217ENST00000491659 TRPC6Q9Y210 931 aa17.14■□□□□ 0.33
USP39-217ENST00000491659 PCDHA11Q9Y5I1 949 aa17.14■□□□□ 0.33
USP39-217ENST00000491659 MICAL3Q7RTP6 2002 aa17.14■□□□□ 0.33
USP39-217ENST00000491659 SIP14410 1827 aa17.14■□□□□ 0.33
USP39-217ENST00000491659 EFCAB14O75071 495 aa17.13■□□□□ 0.33
USP39-217ENST00000491659 FOSL2P15408 326 aa17.13■□□□□ 0.33
USP39-217ENST00000491659 XBP1P17861 261 aa17.13■□□□□ 0.33
USP39-217ENST00000491659 CIITAP33076 1130 aa17.13■□□□□ 0.33
USP39-217ENST00000491659 RABGGTBP53611 331 aa17.13■□□□□ 0.33
USP39-217ENST00000491659 ADAM17P78536 824 aa17.13■□□□□ 0.33
USP39-217ENST00000491659 GPNMBQ14956 572 aa17.13■□□□□ 0.33
USP39-217ENST00000491659 PRR16Q569H4 304 aa17.13■□□□□ 0.33
USP39-217ENST00000491659 FAM160B1Q5W0V3 765 aa17.13■□□□□ 0.33
USP39-217ENST00000491659 GALNT17Q6IS24 598 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms