RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-208ENST00000491541 MAN2A1Q16706 1144 aa11.31□□□□□ -0.6
SREBF2-208ENST00000491541 NFXL1Q6ZNB6 911 aa11.31□□□□□ -0.6
SREBF2-208ENST00000491541 ANKLE1Q8NAG6 615 aa11.31□□□□□ -0.6
SREBF2-208ENST00000491541 N4BP2L2Q92802 583 aaPredicted RBP11.31□□□□□ -0.6
SREBF2-208ENST00000491541 CUL5Q93034 780 aa11.31□□□□□ -0.6
SREBF2-208ENST00000491541 EPSTI1Q96J88 318 aa11.31□□□□□ -0.6
SREBF2-208ENST00000491541 TRIM9Q9C026 710 aa11.31□□□□□ -0.6
SREBF2-208ENST00000491541 SEMA6BQ9H3T3 888 aa11.31□□□□□ -0.6
SREBF2-208ENST00000491541 HDAC6Q9UBN7 1215 aa11.31□□□□□ -0.6
SREBF2-208ENST00000491541 BTBD19C9JJ37 291 aa11.31□□□□□ -0.6
SREBF2-208ENST00000491541 E7EVH7 732 aa11.31□□□□□ -0.6
SREBF2-208ENST00000491541 F8VZ95 297 aa11.31□□□□□ -0.6
SREBF2-208ENST00000491541 SERPING1P05155 500 aa11.31□□□□□ -0.6
SREBF2-208ENST00000491541 MRPS25P82663 173 aaKnown RBP11.31□□□□□ -0.6
SREBF2-208ENST00000491541 GRM4Q14833 912 aa11.31□□□□□ -0.6
SREBF2-208ENST00000491541 TTC38Q5R3I4 469 aa11.31□□□□□ -0.6
SREBF2-208ENST00000491541 PPP1R18Q6NYC8 613 aa11.31□□□□□ -0.6
SREBF2-208ENST00000491541 PPP4R3CPQ6ZMV5 832 aa11.31□□□□□ -0.6
SREBF2-208ENST00000491541 CCDC82Q8N4S0 544 aa11.31□□□□□ -0.6
SREBF2-208ENST00000491541 GBP7Q8N8V2 638 aaPredicted RBP11.31□□□□□ -0.6
SREBF2-208ENST00000491541 SEC16BQ96JE7 1060 aa11.31□□□□□ -0.6
SREBF2-208ENST00000491541 PCMTD1Q96MG8 357 aaPredicted RBP11.31□□□□□ -0.6
SREBF2-208ENST00000491541 SPZ1Q9BXG8 430 aa11.31□□□□□ -0.6
SREBF2-208ENST00000491541 ROPN1BQ9BZX4 212 aaPredicted RBP11.31□□□□□ -0.6
SREBF2-208ENST00000491541 ROPN1Q9HAT0 212 aaPredicted RBP11.31□□□□□ -0.6
SREBF2-208ENST00000491541 LNPEPQ9UIQ6 1025 aa11.31□□□□□ -0.6
SREBF2-208ENST00000491541 COBLO75128 1261 aa11.3□□□□□ -0.6
SREBF2-208ENST00000491541 HSD17B3P37058 310 aa11.3□□□□□ -0.6
SREBF2-208ENST00000491541 CTSWP56202 376 aa11.3□□□□□ -0.6
SREBF2-208ENST00000491541 PUM3Q15397 648 aaKnown RBP11.3□□□□□ -0.6
SREBF2-208ENST00000491541 EDRF1Q3B7T1 1238 aa11.3□□□□□ -0.6
SREBF2-208ENST00000491541 ENAHQ8N8S7 591 aaPredicted RBP11.3□□□□□ -0.6
SREBF2-208ENST00000491541 RBM12Q9NTZ6 932 aaKnown RBP11.3□□□□□ -0.6
SREBF2-208ENST00000491541 ZNF532Q9HCE3 1301 aa11.3□□□□□ -0.6
SREBF2-208ENST00000491541 AFMP43652 599 aa11.3□□□□□ -0.6
SREBF2-208ENST00000491541 PPP2R2AP63151 447 aa11.3□□□□□ -0.6
SREBF2-208ENST00000491541 KIAA1328Q86T90 577 aa11.3□□□□□ -0.6
SREBF2-208ENST00000491541 TRIM59Q8IWR1 403 aa11.3□□□□□ -0.6
SREBF2-208ENST00000491541 STON2Q8WXE9 905 aa11.3□□□□□ -0.6
SREBF2-208ENST00000491541 CCDC47Q96A33 483 aaKnown RBP11.3□□□□□ -0.6
SREBF2-208ENST00000491541 VEZTQ9HBM0 779 aa11.3□□□□□ -0.6
SREBF2-208ENST00000491541 CTNND2Q9UQB3 1225 aa11.3□□□□□ -0.6
SREBF2-208ENST00000491541 SSX2IPQ9Y2D8 614 aa11.3□□□□□ -0.6
SREBF2-208ENST00000491541 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.3□□□□□ -0.6
SREBF2-208ENST00000491541 CCT8L1PA6NM43 557 aa11.3□□□□□ -0.6
SREBF2-208ENST00000491541 TACC1O75410 805 aa11.3□□□□□ -0.6
SREBF2-208ENST00000491541 GGPS1O95749 300 aa11.3□□□□□ -0.6
SREBF2-208ENST00000491541 SCP2P22307 547 aa11.3□□□□□ -0.6
SREBF2-208ENST00000491541 KIF11P52732 1056 aa11.3□□□□□ -0.6
SREBF2-208ENST00000491541 MKRN3Q13064 507 aaKnown RBP11.3□□□□□ -0.6
SREBF2-208ENST00000491541 NAA25Q14CX7 972 aa11.3□□□□□ -0.6
SREBF2-208ENST00000491541 IFI16Q16666 785 aaKnown RBP11.3□□□□□ -0.6
SREBF2-208ENST00000491541 CFAP221Q4G0U5 840 aa11.3□□□□□ -0.6
SREBF2-208ENST00000491541 SND1Q7KZF4 910 aaKnown RBP eCLIP11.3□□□□□ -0.64e-9■■□□□ 13.1
SREBF2-208ENST00000491541 IRF2BP2Q7Z5L9 587 aa11.3□□□□□ -0.6
SREBF2-208ENST00000491541 ZNF526Q8TF50 670 aaPredicted RBP11.3□□□□□ -0.6
SREBF2-208ENST00000491541 PLCD4Q9BRC7 762 aa11.3□□□□□ -0.6
SREBF2-208ENST00000491541 SWAP70Q9UH65 585 aa11.3□□□□□ -0.6
SREBF2-208ENST00000491541 BZW2Q9Y6E2 419 aaKnown RBP11.3□□□□□ -0.6
SREBF2-208ENST00000491541 FAM187AA6NFU0 413 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 PENKP01210 267 aaPredicted RBP11.29□□□□□ -0.6
SREBF2-208ENST00000491541 CCND1P24385 295 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 GCLCP48506 637 aaPredicted RBP11.29□□□□□ -0.6
SREBF2-208ENST00000491541 ERVK-9P63128 1117 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 DIXDC1Q155Q3 683 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 SLC35G1Q2M3R5 365 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 ZNF384Q8TF68 577 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 LZTS2Q9BRK4 669 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 KCTD10Q9H3F6 313 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 CNOT8Q9UFF9 292 aaKnown RBP11.29□□□□□ -0.6
SREBF2-208ENST00000491541 PCDHA4Q9UN74 947 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 HSF2BPO75031 334 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 RARAP10276 462 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 CALRP27797 417 aaKnown RBP11.29□□□□□ -0.6
SREBF2-208ENST00000491541 PTGIRP43119 386 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 PHKA1P46020 1223 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 DNA2P51530 1060 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 PTENP60484 403 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 HDLBPQ00341 1268 aaKnown RBP11.29□□□□□ -0.6
SREBF2-208ENST00000491541 CCDC178Q5BJE1 867 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 KCTD16Q68DU8 428 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 RUFY4Q6ZNE9 571 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 GRAMD1CQ8IYS0 662 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 TUBGCP2Q9BSJ2 902 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 AGPAT5Q9NUQ2 364 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 N4BP3O15049 544 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 DDX3YO15523 660 aaKnown RBP11.29□□□□□ -0.6
SREBF2-208ENST00000491541 AP1G1O43747 822 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 GNA14O95837 355 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 SNHG28P0DPA3 235 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 CALML3P27482 149 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 GUCY2DQ02846 1103 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 CCDC122Q5T0U0 273 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 MOXD1Q6UVY6 613 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 UNC13DQ70J99 1090 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 APBB1IPQ7Z5R6 666 aaPredicted RBP11.29□□□□□ -0.6
SREBF2-208ENST00000491541 DGKHQ86XP1 1220 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 CD101Q93033 1021 aa11.29□□□□□ -0.6
SREBF2-208ENST00000491541 LRRC59Q96AG4 307 aaKnown RBP11.29□□□□□ -0.6
SREBF2-208ENST00000491541 FAM153BP0C7A2 387 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms