RNA–Protein interactions for RNA: ENST00000491464.1

HDAC7-225, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-225ENST00000491464 TRANK1O15050 2925 aa11.15□□□□□ -0.62
HDAC7-225ENST00000491464 SMCO2A6NFE2 343 aa11.15□□□□□ -0.62
HDAC7-225ENST00000491464 STXBP3O00186 592 aa11.15□□□□□ -0.62
HDAC7-225ENST00000491464 ATP9AO75110 1047 aa11.15□□□□□ -0.62
HDAC7-225ENST00000491464 CTSHP09668 335 aa11.15□□□□□ -0.62
HDAC7-225ENST00000491464 CPA1P15085 419 aa11.15□□□□□ -0.62
HDAC7-225ENST00000491464 ZNF76P36508 570 aa11.15□□□□□ -0.62
HDAC7-225ENST00000491464 AKAP17AQ02040 695 aaKnown RBP11.15□□□□□ -0.62
HDAC7-225ENST00000491464 APOBRQ0VD83 1088 aa11.15□□□□□ -0.62
HDAC7-225ENST00000491464 FUT2Q10981 343 aa11.15□□□□□ -0.62
HDAC7-225ENST00000491464 AP3B2Q13367 1082 aa11.15□□□□□ -0.62
HDAC7-225ENST00000491464 ADGRE1Q14246 886 aa11.15□□□□□ -0.62
HDAC7-225ENST00000491464 HIC1Q14526 733 aa11.15□□□□□ -0.62
HDAC7-225ENST00000491464 GPNMBQ14956 572 aa11.15□□□□□ -0.62
HDAC7-225ENST00000491464 TRAF7Q6Q0C0 670 aa11.15□□□□□ -0.62
HDAC7-225ENST00000491464 MICALL1Q8N3F8 863 aa11.15□□□□□ -0.62
HDAC7-225ENST00000491464 USP38Q8NB14 1042 aa11.15□□□□□ -0.62
HDAC7-225ENST00000491464 CCDC12Q8WUD4 166 aaPredicted RBP11.15□□□□□ -0.62
HDAC7-225ENST00000491464 SEPT8Q92599 483 aa11.15□□□□□ -0.62
HDAC7-225ENST00000491464 KCNB2Q92953 911 aa11.15□□□□□ -0.62
HDAC7-225ENST00000491464 MXRA8Q9BRK3 442 aa11.15□□□□□ -0.62
HDAC7-225ENST00000491464 SDF4Q9BRK5 362 aa11.15□□□□□ -0.62
HDAC7-225ENST00000491464 TSPYL2Q9H2G4 693 aaPredicted RBP11.15□□□□□ -0.62
HDAC7-225ENST00000491464 SMARCAD1Q9H4L7 1026 aa11.15□□□□□ -0.62
HDAC7-225ENST00000491464 AZI2Q9H6S1 392 aa11.15□□□□□ -0.62
HDAC7-225ENST00000491464 JPH1Q9HDC5 661 aaPredicted RBP11.15□□□□□ -0.62
HDAC7-225ENST00000491464 ERAP1Q9NZ08 941 aa11.15□□□□□ -0.62
HDAC7-225ENST00000491464 SNX14Q9Y5W7 946 aa11.15□□□□□ -0.62
HDAC7-225ENST00000491464 TTC28Q96AY4 2481 aa11.14□□□□□ -0.63
HDAC7-225ENST00000491464 AMHP03971 560 aa11.14□□□□□ -0.63
HDAC7-225ENST00000491464 SCG2P13521 617 aa11.14□□□□□ -0.63
HDAC7-225ENST00000491464 MARK3P27448 753 aa11.14□□□□□ -0.63
HDAC7-225ENST00000491464 CDC27P30260 824 aa11.14□□□□□ -0.63
HDAC7-225ENST00000491464 ADD1P35611 737 aaKnown RBP11.14□□□□□ -0.63
HDAC7-225ENST00000491464 DEFB103AP81534 67 aa11.14□□□□□ -0.63
HDAC7-225ENST00000491464 PPFIA1Q13136 1202 aa11.14□□□□□ -0.63
HDAC7-225ENST00000491464 MBTPS1Q14703 1052 aa11.14□□□□□ -0.63
HDAC7-225ENST00000491464 CCDC85BQ15834 202 aaPredicted RBP11.14□□□□□ -0.63
HDAC7-225ENST00000491464 PFKFB3Q16875 520 aaPredicted RBP11.14□□□□□ -0.63
HDAC7-225ENST00000491464 TYW1BQ6NUM6 668 aa11.14□□□□□ -0.63
HDAC7-225ENST00000491464 TAF2Q6P1X5 1199 aa11.14□□□□□ -0.63
HDAC7-225ENST00000491464 RSPH3Q86UC2 560 aa11.14□□□□□ -0.63
HDAC7-225ENST00000491464 LMBR1Q8WVP7 490 aa11.14□□□□□ -0.63
HDAC7-225ENST00000491464 ARNTL2Q8WYA1 636 aa11.14□□□□□ -0.63
HDAC7-225ENST00000491464 SYMPKQ92797 1274 aaKnown RBP11.14□□□□□ -0.63
HDAC7-225ENST00000491464 TNPO1Q92973 898 aaKnown RBP11.14□□□□□ -0.63
HDAC7-225ENST00000491464 PGBD1Q96JS3 809 aa11.14□□□□□ -0.63
HDAC7-225ENST00000491464 COL25A1Q9BXS0 654 aaPredicted RBP11.14□□□□□ -0.63
HDAC7-225ENST00000491464 CERS4Q9HA82 394 aa11.14□□□□□ -0.63
HDAC7-225ENST00000491464 KCNH7Q9NS40 1196 aa11.14□□□□□ -0.63
HDAC7-225ENST00000491464 THEGQ9P2T0 379 aa11.14□□□□□ -0.63
HDAC7-225ENST00000491464 SLC9A2Q9UBY0 812 aa11.14□□□□□ -0.63
HDAC7-225ENST00000491464 PRRC2BQ5JSZ5 2229 aaKnown RBP11.14□□□□□ -0.63
HDAC7-225ENST00000491464 GSTTP1A0A1W2PQM5 241 aa11.13□□□□□ -0.63
HDAC7-225ENST00000491464 GJB5O95377 273 aa11.13□□□□□ -0.63
HDAC7-225ENST00000491464 RPS6KB1P23443 525 aa11.13□□□□□ -0.63
HDAC7-225ENST00000491464 SREBF1P36956 1147 aa11.13□□□□□ -0.63
HDAC7-225ENST00000491464 TAP1Q03518 808 aa11.13□□□□□ -0.63
HDAC7-225ENST00000491464 CEP55Q53EZ4 464 aa11.13□□□□□ -0.63
HDAC7-225ENST00000491464 TJAP1Q5JTD0 557 aa11.13□□□□□ -0.63
HDAC7-225ENST00000491464 MCTP2Q6DN12 878 aa11.13□□□□□ -0.63
HDAC7-225ENST00000491464 FAM117BQ6P1L5 589 aa11.13□□□□□ -0.63
HDAC7-225ENST00000491464 MYOCDQ8IZQ8 938 aa11.13□□□□□ -0.63
HDAC7-225ENST00000491464 IL27Q8NEV9 243 aa11.13□□□□□ -0.63
HDAC7-225ENST00000491464 DBF4BQ8NFT6 615 aa11.13□□□□□ -0.63
HDAC7-225ENST00000491464 RAD9AQ99638 391 aa11.13□□□□□ -0.63
HDAC7-225ENST00000491464 C6orf50Q9HD87 102 aa11.13□□□□□ -0.63
HDAC7-225ENST00000491464 FAM217BQ9NTX9 383 aaPredicted RBP11.13□□□□□ -0.63
HDAC7-225ENST00000491464 TUBE1Q9UJT0 475 aa11.13□□□□□ -0.63
HDAC7-225ENST00000491464 TELO2Q9Y4R8 837 aa11.13□□□□□ -0.63
HDAC7-225ENST00000491464 NFASCO94856 1347 aa11.12□□□□□ -0.63
HDAC7-225ENST00000491464 ESYT2A0FGR8 921 aa11.12□□□□□ -0.63
HDAC7-225ENST00000491464 EPB41L2O43491 1005 aaKnown RBP11.12□□□□□ -0.63
HDAC7-225ENST00000491464 RPLP2P05387 115 aaKnown RBP11.12□□□□□ -0.63
HDAC7-225ENST00000491464 GNA11P29992 359 aa11.12□□□□□ -0.63
HDAC7-225ENST00000491464 ADAM17P78536 824 aa11.12□□□□□ -0.63
HDAC7-225ENST00000491464 SKIV2LQ15477 1246 aaKnown RBP11.12□□□□□ -0.63
HDAC7-225ENST00000491464 GRIK4Q16099 956 aa11.12□□□□□ -0.63
HDAC7-225ENST00000491464 TCTN1Q2MV58 587 aa11.12□□□□□ -0.63
HDAC7-225ENST00000491464 PLEKHG4Q58EX7 1191 aa11.12□□□□□ -0.63
HDAC7-225ENST00000491464 JAKMIP3Q5VZ66 844 aa11.12□□□□□ -0.63
HDAC7-225ENST00000491464 NIPA1Q7RTP0 329 aa11.12□□□□□ -0.63
HDAC7-225ENST00000491464 TMCO2Q7Z6W1 182 aaPredicted RBP11.12□□□□□ -0.63
HDAC7-225ENST00000491464 REXO1Q8N1G1 1221 aaKnown RBP11.12□□□□□ -0.63
HDAC7-225ENST00000491464 FBXL16Q8N461 479 aa11.12□□□□□ -0.63
HDAC7-225ENST00000491464 CCDC148Q8NFR7 591 aa11.12□□□□□ -0.63
HDAC7-225ENST00000491464 BICD2Q8TD16 824 aa11.12□□□□□ -0.63
HDAC7-225ENST00000491464 ATXN2LQ8WWM7 1075 aaKnown RBP11.12□□□□□ -0.63
HDAC7-225ENST00000491464 APBB2Q92870 758 aa11.12□□□□□ -0.63
HDAC7-225ENST00000491464 TMEM260Q9NX78 707 aa11.12□□□□□ -0.63
HDAC7-225ENST00000491464 TCEAL9Q9UHQ7 104 aa11.12□□□□□ -0.63
HDAC7-225ENST00000491464 TRPC6Q9Y210 931 aa11.12□□□□□ -0.63
HDAC7-225ENST00000491464 INSL6Q9Y581 213 aa11.12□□□□□ -0.63
HDAC7-225ENST00000491464 NID2Q14112 1375 aa11.12□□□□□ -0.63
HDAC7-225ENST00000491464 NCOR1O75376 2440 aa11.11□□□□□ -0.63
HDAC7-225ENST00000491464 LCHNA4D1U4 455 aa11.11□□□□□ -0.63
HDAC7-225ENST00000491464 RRN3P2A6NIE6 340 aa11.11□□□□□ -0.63
HDAC7-225ENST00000491464 RFXAPO00287 272 aa11.11□□□□□ -0.63
HDAC7-225ENST00000491464 MEIS1O00470 390 aa11.11□□□□□ -0.63
HDAC7-225ENST00000491464 PRPF3O43395 683 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms