RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 SLC9A2Q9UBY0 812 aa18.89■□□□□ 0.61
PDLIM2-217ENST00000491330 STXBP3O00186 592 aa18.88■□□□□ 0.61
PDLIM2-217ENST00000491330 PRPF3O43395 683 aaKnown RBP18.88■□□□□ 0.61
PDLIM2-217ENST00000491330 KCNA2P16389 499 aa18.88■□□□□ 0.61
PDLIM2-217ENST00000491330 ADD1P35611 737 aaKnown RBP18.88■□□□□ 0.61
PDLIM2-217ENST00000491330 ZNF200P98182 395 aaPredicted RBP18.88■□□□□ 0.61
PDLIM2-217ENST00000491330 PPFIA1Q13136 1202 aa18.88■□□□□ 0.61
PDLIM2-217ENST00000491330 SEMA3FQ13275 785 aa18.88■□□□□ 0.61
PDLIM2-217ENST00000491330 REXO1Q8N1G1 1221 aaKnown RBP18.88■□□□□ 0.61
PDLIM2-217ENST00000491330 DHX38Q92620 1227 aaKnown RBP18.88■□□□□ 0.61
PDLIM2-217ENST00000491330 KCNH7Q9NS40 1196 aa18.88■□□□□ 0.61
PDLIM2-217ENST00000491330 ESYT2A0FGR8 921 aa18.87■□□□□ 0.61
PDLIM2-217ENST00000491330 M0QZ92 97 aa18.87■□□□□ 0.61
PDLIM2-217ENST00000491330 TREHO43280 583 aa18.87■□□□□ 0.61
PDLIM2-217ENST00000491330 NFASCO94856 1347 aa18.87■□□□□ 0.61
PDLIM2-217ENST00000491330 CA3P07451 260 aa18.87■□□□□ 0.61
PDLIM2-217ENST00000491330 SLC26A2P50443 739 aa18.87■□□□□ 0.61
PDLIM2-217ENST00000491330 KIAA1217Q5T5P2 1943 aa18.87■□□□□ 0.61
PDLIM2-217ENST00000491330 FAM160B1Q5W0V3 765 aa18.87■□□□□ 0.61
PDLIM2-217ENST00000491330 DNAH12Q6ZR08 3092 aa18.87■□□□□ 0.61
PDLIM2-217ENST00000491330 RUFY3Q7L099 469 aa18.87■□□□□ 0.61
PDLIM2-217ENST00000491330 PPM1EQ8WY54 764 aa18.87■□□□□ 0.61
PDLIM2-217ENST00000491330 APBB2Q92870 758 aa18.87■□□□□ 0.61
PDLIM2-217ENST00000491330 RNF26Q9BY78 433 aaPredicted RBP18.87■□□□□ 0.61
PDLIM2-217ENST00000491330 C22orf23Q9BZE7 217 aa18.87■□□□□ 0.61
PDLIM2-217ENST00000491330 YBX2Q9Y2T7 364 aaKnown RBP18.87■□□□□ 0.61
PDLIM2-217ENST00000491330 NBNO60934 754 aa18.86■□□□□ 0.61
PDLIM2-217ENST00000491330 ATP9AO75110 1047 aa18.86■□□□□ 0.61
PDLIM2-217ENST00000491330 CDC27P30260 824 aa18.86■□□□□ 0.61
PDLIM2-217ENST00000491330 SREBF1P36956 1147 aa18.86■□□□□ 0.61
PDLIM2-217ENST00000491330 WDR5P61964 334 aaKnown RBP18.86■□□□□ 0.61
PDLIM2-217ENST00000491330 NIPA1Q7RTP0 329 aa18.86■□□□□ 0.61
PDLIM2-217ENST00000491330 CTAGE1Q96RT6 745 aa18.86■□□□□ 0.61
PDLIM2-217ENST00000491330 RAD9AQ99638 391 aa18.86■□□□□ 0.61
PDLIM2-217ENST00000491330 TRPC6Q9Y210 931 aa18.86■□□□□ 0.61
PDLIM2-217ENST00000491330 BACH1O14867 736 aa18.85■□□□□ 0.61
PDLIM2-217ENST00000491330 CPA1P15085 419 aa18.85■□□□□ 0.61
PDLIM2-217ENST00000491330 SETQ01105 290 aaPredicted RBP18.85■□□□□ 0.61
PDLIM2-217ENST00000491330 SSRP1Q08945 709 aaKnown RBP18.85■□□□□ 0.61
PDLIM2-217ENST00000491330 FUT2Q10981 343 aa18.85■□□□□ 0.61
PDLIM2-217ENST00000491330 COL9A3Q14050 684 aaPredicted RBP18.85■□□□□ 0.61
PDLIM2-217ENST00000491330 TRIM71Q2Q1W2 868 aaKnown RBP18.85■□□□□ 0.61
PDLIM2-217ENST00000491330 IER5Q5VY09 327 aa18.85■□□□□ 0.61
PDLIM2-217ENST00000491330 JAKMIP3Q5VZ66 844 aa18.85■□□□□ 0.61
PDLIM2-217ENST00000491330 PLA2G4DQ86XP0 818 aa18.85■□□□□ 0.61
PDLIM2-217ENST00000491330 TRIM50Q86XT4 487 aa18.85■□□□□ 0.61
PDLIM2-217ENST00000491330 SLC26A6Q9BXS9 759 aa18.85■□□□□ 0.61
PDLIM2-217ENST00000491330 TM6SF1Q9BZW5 370 aa18.85■□□□□ 0.61
PDLIM2-217ENST00000491330 ZMYND12Q9H0C1 365 aa18.85■□□□□ 0.61
PDLIM2-217ENST00000491330 BCAS3Q9H6U6 928 aa18.85■□□□□ 0.61
PDLIM2-217ENST00000491330 TBC1D22BQ9NU19 505 aa18.85■□□□□ 0.61
PDLIM2-217ENST00000491330 INSL6Q9Y581 213 aa18.85■□□□□ 0.61
PDLIM2-217ENST00000491330 GSTTP1A0A1W2PQM5 241 aa18.84■□□□□ 0.61
PDLIM2-217ENST00000491330 MEIS1O00470 390 aa18.84■□□□□ 0.61
PDLIM2-217ENST00000491330 CDKL5O76039 1030 aa18.84■□□□□ 0.61
PDLIM2-217ENST00000491330 CTSHP09668 335 aa18.84■□□□□ 0.61
PDLIM2-217ENST00000491330 IFNAR1P17181 557 aa18.84■□□□□ 0.61
PDLIM2-217ENST00000491330 XBP1P17861 261 aa18.84■□□□□ 0.61
PDLIM2-217ENST00000491330 MARK3P27448 753 aa18.84■□□□□ 0.61
PDLIM2-217ENST00000491330 HOXC8P31273 242 aa18.84■□□□□ 0.61
PDLIM2-217ENST00000491330 STAT5BP51692 787 aa18.84■□□□□ 0.61
PDLIM2-217ENST00000491330 NLRP5P59047 1200 aa18.84■□□□□ 0.61
PDLIM2-217ENST00000491330 GRIK4Q16099 956 aa18.84■□□□□ 0.61
PDLIM2-217ENST00000491330 PLPPR4Q7Z2D5 763 aa18.84■□□□□ 0.61
PDLIM2-217ENST00000491330 DBF4BQ8NFT6 615 aa18.84■□□□□ 0.61
PDLIM2-217ENST00000491330 LMBR1Q8WVP7 490 aa18.84■□□□□ 0.61
PDLIM2-217ENST00000491330 AGXT2Q9BYV1 514 aa18.84■□□□□ 0.61
PDLIM2-217ENST00000491330 ZSWIM6Q9HCJ5 1215 aa18.84■□□□□ 0.61
PDLIM2-217ENST00000491330 SH3GLB2Q9NR46 395 aa18.84■□□□□ 0.61
PDLIM2-217ENST00000491330 FAM217BQ9NTX9 383 aaPredicted RBP18.84■□□□□ 0.61
PDLIM2-217ENST00000491330 TUBE1Q9UJT0 475 aa18.84■□□□□ 0.61
PDLIM2-217ENST00000491330 MYOGP15173 224 aa18.83■□□□□ 0.6
PDLIM2-217ENST00000491330 SKIV2LQ15477 1246 aaKnown RBP18.83■□□□□ 0.6
PDLIM2-217ENST00000491330 AAK1Q2M2I8 961 aa18.83■□□□□ 0.6
PDLIM2-217ENST00000491330 MIS18BP1Q6P0N0 1132 aa18.83■□□□□ 0.6
PDLIM2-217ENST00000491330 FAM43BQ6ZT52 329 aaPredicted RBP18.83■□□□□ 0.6
PDLIM2-217ENST00000491330 FAM177A1Q8N128 213 aaPredicted RBP18.83■□□□□ 0.6
PDLIM2-217ENST00000491330 ARNTL2Q8WYA1 636 aa18.83■□□□□ 0.6
PDLIM2-217ENST00000491330 ZNF274Q96GC6 653 aaPredicted RBP18.83■□□□□ 0.6
PDLIM2-217ENST00000491330 ZNF577Q9BSK1 485 aa18.83■□□□□ 0.6
PDLIM2-217ENST00000491330 AGO4Q9HCK5 861 aaKnown RBP18.83■□□□□ 0.6
PDLIM2-217ENST00000491330 PDRG1Q9NUG6 133 aa18.83■□□□□ 0.6
PDLIM2-217ENST00000491330 NID2Q14112 1375 aa18.82■□□□□ 0.6
PDLIM2-217ENST00000491330 GJB5O95377 273 aa18.82■□□□□ 0.6
PDLIM2-217ENST00000491330 CYP3A4P08684 503 aa18.82■□□□□ 0.6
PDLIM2-217ENST00000491330 PDIA3P30101 505 aaKnown RBP18.82■□□□□ 0.6
PDLIM2-217ENST00000491330 ANAPC15P60006 121 aa18.82■□□□□ 0.6
PDLIM2-217ENST00000491330 ACTR2P61160 394 aa18.82■□□□□ 0.6
PDLIM2-217ENST00000491330 IGBP1P78318 339 aa18.82■□□□□ 0.6
PDLIM2-217ENST00000491330 CCT2P78371 535 aaKnown RBP18.82■□□□□ 0.6
PDLIM2-217ENST00000491330 ANKRD1Q15327 319 aa18.82■□□□□ 0.6
PDLIM2-217ENST00000491330 PLEKHG4Q58EX7 1191 aa18.82■□□□□ 0.6
PDLIM2-217ENST00000491330 RPAINQ86UA6 219 aa18.82■□□□□ 0.6
PDLIM2-217ENST00000491330 CKAP2LQ8IYA6 745 aa18.82■□□□□ 0.6
PDLIM2-217ENST00000491330 MYOCDQ8IZQ8 938 aa18.82■□□□□ 0.6
PDLIM2-217ENST00000491330 MICALL1Q8N3F8 863 aa18.82■□□□□ 0.6
PDLIM2-217ENST00000491330 PHKBQ93100 1093 aa18.82■□□□□ 0.6
PDLIM2-217ENST00000491330 VWCEQ96DN2 955 aa18.82■□□□□ 0.6
PDLIM2-217ENST00000491330 PGBD1Q96JS3 809 aa18.82■□□□□ 0.6
PDLIM2-217ENST00000491330 IFIH1Q9BYX4 1025 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms