RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 FLT3P36888 993 aa10.71□□□□□ -0.69
ERCC3-208ENST00000491292 PPP1R2P41236 205 aa10.71□□□□□ -0.69
ERCC3-208ENST00000491292 TRIP13Q15645 432 aaPredicted RBP10.71□□□□□ -0.69
ERCC3-208ENST00000491292 UBE2SQ16763 222 aa10.71□□□□□ -0.69
ERCC3-208ENST00000491292 GNPTABQ3T906 1256 aa10.71□□□□□ -0.69
ERCC3-208ENST00000491292 FAM47EQ6ZV65 393 aa10.71□□□□□ -0.69
ERCC3-208ENST00000491292 GLG1Q92896 1179 aa10.71□□□□□ -0.69
ERCC3-208ENST00000491292 MIEF2Q96C03 454 aa10.71□□□□□ -0.69
ERCC3-208ENST00000491292 ERGIC2Q96RQ1 377 aa10.71□□□□□ -0.69
ERCC3-208ENST00000491292 TAOK3Q9H2K8 898 aa10.71□□□□□ -0.69
ERCC3-208ENST00000491292 CPSF2Q9P2I0 782 aaKnown RBP10.71□□□□□ -0.69
ERCC3-208ENST00000491292 ATP6V0A2Q9Y487 856 aa10.71□□□□□ -0.69
ERCC3-208ENST00000491292 TDP2O95551 362 aa10.71□□□□□ -0.69
ERCC3-208ENST00000491292 TNFAIP3P21580 790 aa10.71□□□□□ -0.69
ERCC3-208ENST00000491292 ERFP50548 548 aa10.71□□□□□ -0.69
ERCC3-208ENST00000491292 KCNQ4P56696 695 aa10.71□□□□□ -0.69
ERCC3-208ENST00000491292 ANKRD20A8PQ5CZ79 823 aa10.71□□□□□ -0.69
ERCC3-208ENST00000491292 PPP4R3AQ6IN85 833 aa10.71□□□□□ -0.69
ERCC3-208ENST00000491292 IQCKQ8N0W5 287 aa10.71□□□□□ -0.69
ERCC3-208ENST00000491292 LRRC47Q8N1G4 583 aaKnown RBP10.71□□□□□ -0.69
ERCC3-208ENST00000491292 CAVIN3Q969G5 261 aa10.71□□□□□ -0.69
ERCC3-208ENST00000491292 ZNF622Q969S3 477 aaKnown RBP eCLIP10.71□□□□□ -0.69
ERCC3-208ENST00000491292 ADAM33Q9BZ11 813 aa10.71□□□□□ -0.69
ERCC3-208ENST00000491292 ARMCX3Q9UH62 379 aaPredicted RBP10.71□□□□□ -0.69
ERCC3-208ENST00000491292 CAND2O75155 1236 aa10.71□□□□□ -0.7
ERCC3-208ENST00000491292 LRRN2O75325 713 aa10.71□□□□□ -0.7
ERCC3-208ENST00000491292 FGFR4P22455 802 aa10.71□□□□□ -0.7
ERCC3-208ENST00000491292 CYP4A11Q02928 519 aa10.71□□□□□ -0.7
ERCC3-208ENST00000491292 DIXDC1Q155Q3 683 aa10.71□□□□□ -0.7
ERCC3-208ENST00000491292 EXOC3L4Q17RC7 722 aa10.71□□□□□ -0.7
ERCC3-208ENST00000491292 INTS8Q75QN2 995 aaKnown RBP10.71□□□□□ -0.7
ERCC3-208ENST00000491292 RNF10Q8N5U6 811 aaKnown RBP10.71□□□□□ -0.7
ERCC3-208ENST00000491292 KIAA0895Q8NCT3 520 aa10.71□□□□□ -0.7
ERCC3-208ENST00000491292 RPGRQ92834 1020 aaKnown RBP10.71□□□□□ -0.7
ERCC3-208ENST00000491292 ZMYND12Q9H0C1 365 aa10.71□□□□□ -0.7
ERCC3-208ENST00000491292 KIF9Q9HAQ2 790 aa10.71□□□□□ -0.7
ERCC3-208ENST00000491292 TMOD4Q9NZQ9 345 aa10.71□□□□□ -0.7
ERCC3-208ENST00000491292 ASIC3Q9UHC3 531 aa10.71□□□□□ -0.7
ERCC3-208ENST00000491292 E9PMD0 336 aa10.7□□□□□ -0.7
ERCC3-208ENST00000491292 MECOMQ03112 1051 aa10.7□□□□□ -0.7
ERCC3-208ENST00000491292 CALCOCO2Q13137 446 aa10.7□□□□□ -0.7
ERCC3-208ENST00000491292 SNX1Q13596 522 aa10.7□□□□□ -0.7
ERCC3-208ENST00000491292 TAF11Q15544 211 aa10.7□□□□□ -0.7
ERCC3-208ENST00000491292 MIIPQ5JXC2 388 aa10.7□□□□□ -0.7
ERCC3-208ENST00000491292 MEX3CQ5U5Q3 659 aaKnown RBP10.7□□□□□ -0.7
ERCC3-208ENST00000491292 SMIM5Q71RC9 77 aa10.7□□□□□ -0.7
ERCC3-208ENST00000491292 LRRC34Q8IZ02 419 aa10.7□□□□□ -0.7
ERCC3-208ENST00000491292 XPO6Q96QU8 1125 aaKnown RBP10.7□□□□□ -0.7
ERCC3-208ENST00000491292 SPATS2LQ9NUQ6 558 aaKnown RBP10.7□□□□□ -0.7
ERCC3-208ENST00000491292 KLRC4O43908 158 aa10.7□□□□□ -0.7
ERCC3-208ENST00000491292 SLC9A1P19634 815 aa10.7□□□□□ -0.7
ERCC3-208ENST00000491292 STX2P32856 288 aa10.7□□□□□ -0.7
ERCC3-208ENST00000491292 ZNF844Q08AG5 666 aa10.7□□□□□ -0.7
ERCC3-208ENST00000491292 BIRC3Q13489 604 aa10.7□□□□□ -0.7
ERCC3-208ENST00000491292 CUL1Q13616 776 aa10.7□□□□□ -0.7
ERCC3-208ENST00000491292 PRCCQ92733 491 aaPredicted RBP10.7□□□□□ -0.7
ERCC3-208ENST00000491292 OSBPL7Q9BZF2 842 aa10.7□□□□□ -0.7
ERCC3-208ENST00000491292 RAB17Q9H0T7 212 aa10.7□□□□□ -0.7
ERCC3-208ENST00000491292 CCDC169A6NNP5 214 aa10.7□□□□□ -0.7
ERCC3-208ENST00000491292 SFI1A8K8P3 1242 aa10.7□□□□□ -0.7
ERCC3-208ENST00000491292 SPOPO43791 374 aa10.7□□□□□ -0.7
ERCC3-208ENST00000491292 EVI5O60447 810 aa10.7□□□□□ -0.7
ERCC3-208ENST00000491292 TBCAO75347 108 aaKnown RBP10.7□□□□□ -0.7
ERCC3-208ENST00000491292 HIBADHP31937 336 aaKnown RBP10.7□□□□□ -0.7
ERCC3-208ENST00000491292 KCNH2Q12809 1159 aa10.7□□□□□ -0.7
ERCC3-208ENST00000491292 PABPC4Q13310 644 aaKnown RBP eCLIP10.7□□□□□ -0.78e-8■■■■■ 36.2
ERCC3-208ENST00000491292 ITGB3BPQ13352 177 aaPredicted RBP10.7□□□□□ -0.7
ERCC3-208ENST00000491292 GJB7Q6PEY0 223 aa10.7□□□□□ -0.7
ERCC3-208ENST00000491292 METTL13Q8N6R0 699 aa10.7□□□□□ -0.7
ERCC3-208ENST00000491292 NEK9Q8TD19 979 aa10.7□□□□□ -0.7
ERCC3-208ENST00000491292 ANKS1AQ92625 1134 aa10.7□□□□□ -0.7
ERCC3-208ENST00000491292 DCP1AQ9NPI6 582 aaPredicted RBP10.7□□□□□ -0.7
ERCC3-208ENST00000491292 ZC3H4Q9UPT8 1303 aaKnown RBP10.7□□□□□ -0.7
ERCC3-208ENST00000491292 G3V3G9 751 aa10.69□□□□□ -0.7
ERCC3-208ENST00000491292 GCNT3O95395 438 aa10.69□□□□□ -0.7
ERCC3-208ENST00000491292 ANP32DO95626 131 aa10.69□□□□□ -0.7
ERCC3-208ENST00000491292 XRCC5P13010 732 aaKnown RBP10.69□□□□□ -0.7
ERCC3-208ENST00000491292 DR1Q01658 176 aa10.69□□□□□ -0.7
ERCC3-208ENST00000491292 PREPLQ4J6C6 727 aaPredicted RBP10.69□□□□□ -0.7
ERCC3-208ENST00000491292 DCAF8Q5TAQ9 597 aa10.69□□□□□ -0.7
ERCC3-208ENST00000491292 AP1ARQ63HQ0 302 aa10.69□□□□□ -0.7
ERCC3-208ENST00000491292 ZNF449Q6P9G9 518 aa10.69□□□□□ -0.7
ERCC3-208ENST00000491292 FBF1Q8TES7 1133 aa10.69□□□□□ -0.7
ERCC3-208ENST00000491292 ZBTB10Q96DT7 871 aa10.69□□□□□ -0.7
ERCC3-208ENST00000491292 LRRC27Q9C0I9 530 aa10.69□□□□□ -0.7
ERCC3-208ENST00000491292 KBTBD4Q9NVX7 518 aa10.69□□□□□ -0.7
ERCC3-208ENST00000491292 CEP72Q9P209 647 aa10.69□□□□□ -0.7
ERCC3-208ENST00000491292 CNOT8Q9UFF9 292 aaKnown RBP10.69□□□□□ -0.7
ERCC3-208ENST00000491292 PCDHA12Q9UN75 941 aa10.69□□□□□ -0.7
ERCC3-208ENST00000491292 CHD2O14647 1828 aaKnown RBP10.69□□□□□ -0.7
ERCC3-208ENST00000491292 CCT8L1PA6NM43 557 aa10.69□□□□□ -0.7
ERCC3-208ENST00000491292 HIP1RO75146 1068 aa10.69□□□□□ -0.7
ERCC3-208ENST00000491292 PTK2Q05397 1052 aa10.69□□□□□ -0.7
ERCC3-208ENST00000491292 MESDQ14696 234 aa10.69□□□□□ -0.7
ERCC3-208ENST00000491292 SLC18A3Q16572 532 aa10.69□□□□□ -0.7
ERCC3-208ENST00000491292 CAPRIN2Q6IMN6 1127 aaKnown RBP10.69□□□□□ -0.7
ERCC3-208ENST00000491292 TMED8Q6PL24 325 aaPredicted RBP10.69□□□□□ -0.7
ERCC3-208ENST00000491292 UNC13DQ70J99 1090 aa10.69□□□□□ -0.7
ERCC3-208ENST00000491292 PHLDB2Q86SQ0 1253 aa10.69□□□□□ -0.7
ERCC3-208ENST00000491292 SYCP3Q8IZU3 236 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms