RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 ANO3Q9BYT9 981 aa20.6■□□□□ 0.89
HMGN1-219ENST00000491183 EHMT1Q9H9B1 1298 aa20.6■□□□□ 0.89
HMGN1-219ENST00000491183 ZNF215Q9UL58 517 aaPredicted RBP20.6■□□□□ 0.89
HMGN1-219ENST00000491183 NID2Q14112 1375 aa20.59■□□□□ 0.89
HMGN1-219ENST00000491183 CCDC196A0A1B0GTZ2 297 aa20.59■□□□□ 0.89
HMGN1-219ENST00000491183 RSPH10B2B2RC85 870 aa20.59■□□□□ 0.89
HMGN1-219ENST00000491183 CA3P07451 260 aa20.59■□□□□ 0.89
HMGN1-219ENST00000491183 RSPH10BP0C881 870 aa20.59■□□□□ 0.89
HMGN1-219ENST00000491183 PSMA5P28066 241 aa20.59■□□□□ 0.89
HMGN1-219ENST00000491183 NTRK3Q16288 839 aa20.59■□□□□ 0.89
HMGN1-219ENST00000491183 PKN1Q16512 942 aa20.59■□□□□ 0.89
HMGN1-219ENST00000491183 TMCO2Q7Z6W1 182 aaPredicted RBP20.59■□□□□ 0.89
HMGN1-219ENST00000491183 OSBPL7Q9BZF2 842 aa20.59■□□□□ 0.89
HMGN1-219ENST00000491183 KCNH7Q9NS40 1196 aa20.59■□□□□ 0.89
HMGN1-219ENST00000491183 UNC80Q8N2C7 3258 aa20.58■□□□□ 0.89
HMGN1-219ENST00000491183 KAT6AQ92794 2004 aa20.58■□□□□ 0.89
HMGN1-219ENST00000491183 PRPF3O43395 683 aaKnown RBP20.58■□□□□ 0.89
HMGN1-219ENST00000491183 EPB41L2O43491 1005 aaKnown RBP20.58■□□□□ 0.89
HMGN1-219ENST00000491183 ARHGEF15O94989 841 aa20.58■□□□□ 0.89
HMGN1-219ENST00000491183 ARP10275 920 aa20.58■□□□□ 0.89
HMGN1-219ENST00000491183 SCG2P13521 617 aa20.58■□□□□ 0.89
HMGN1-219ENST00000491183 EVCP57679 992 aa20.58■□□□□ 0.89
HMGN1-219ENST00000491183 DEFB103AP81534 67 aa20.58■□□□□ 0.89
HMGN1-219ENST00000491183 LMBR1Q8WVP7 490 aa20.58■□□□□ 0.89
HMGN1-219ENST00000491183 ZSWIM6Q9HCJ5 1215 aa20.58■□□□□ 0.89
HMGN1-219ENST00000491183 ABHD14A-ACY1A0A1B0GW23 586 aa20.57■□□□□ 0.88
HMGN1-219ENST00000491183 LGR5O75473 907 aa20.57■□□□□ 0.88
HMGN1-219ENST00000491183 GNAT1P11488 350 aa20.57■□□□□ 0.88
HMGN1-219ENST00000491183 PDIA3P30101 505 aaKnown RBP20.57■□□□□ 0.88
HMGN1-219ENST00000491183 SREBF1P36956 1147 aa20.57■□□□□ 0.88
HMGN1-219ENST00000491183 KCNJ6P48051 423 aa20.57■□□□□ 0.88
HMGN1-219ENST00000491183 ARHGAP4P98171 946 aa20.57■□□□□ 0.88
HMGN1-219ENST00000491183 AP3B2Q13367 1082 aa20.57■□□□□ 0.88
HMGN1-219ENST00000491183 RUFY3Q7L099 469 aa20.57■□□□□ 0.88
HMGN1-219ENST00000491183 DBF4BQ8NFT6 615 aa20.57■□□□□ 0.88
HMGN1-219ENST00000491183 PHKBQ93100 1093 aa20.57■□□□□ 0.88
HMGN1-219ENST00000491183 PCYT2Q99447 389 aa20.57■□□□□ 0.88
HMGN1-219ENST00000491183 GLT8D2Q9H1C3 349 aa20.57■□□□□ 0.88
HMGN1-219ENST00000491183 A0A0C4DFX4 3053 aa20.57■□□□□ 0.88
HMGN1-219ENST00000491183 NRCAMQ92823 1304 aa20.56■□□□□ 0.88
HMGN1-219ENST00000491183 PRUNE2Q8WUY3 3088 aa20.56■□□□□ 0.88
HMGN1-219ENST00000491183 MEIS1O00470 390 aa20.56■□□□□ 0.88
HMGN1-219ENST00000491183 TAP1Q03518 808 aa20.56■□□□□ 0.88
HMGN1-219ENST00000491183 MKRN4PQ13434 485 aaPredicted RBP20.56■□□□□ 0.88
HMGN1-219ENST00000491183 TOB2Q14106 344 aaPredicted RBP20.56■□□□□ 0.88
HMGN1-219ENST00000491183 IKBKEQ14164 716 aa20.56■□□□□ 0.88
HMGN1-219ENST00000491183 CEP55Q53EZ4 464 aa20.56■□□□□ 0.88
HMGN1-219ENST00000491183 JAKMIP3Q5VZ66 844 aa20.56■□□□□ 0.88
HMGN1-219ENST00000491183 ZMYND12Q9H0C1 365 aa20.56■□□□□ 0.88
HMGN1-219ENST00000491183 SLC9A2Q9UBY0 812 aa20.56■□□□□ 0.88
HMGN1-219ENST00000491183 CHD7Q9P2D1 2997 aa20.55■□□□□ 0.88
HMGN1-219ENST00000491183 EMSYQ7Z589 1322 aa20.55■□□□□ 0.88
HMGN1-219ENST00000491183 ESYT2A0FGR8 921 aa20.55■□□□□ 0.88
HMGN1-219ENST00000491183 KIF28PB7ZC32 967 aa20.55■□□□□ 0.88
HMGN1-219ENST00000491183 RFXAPO00287 272 aa20.55■□□□□ 0.88
HMGN1-219ENST00000491183 PPFIA3O75145 1194 aa20.55■□□□□ 0.88
HMGN1-219ENST00000491183 IGFBP4P22692 258 aa20.55■□□□□ 0.88
HMGN1-219ENST00000491183 MARK3P27448 753 aa20.55■□□□□ 0.88
HMGN1-219ENST00000491183 ITGB3BPQ13352 177 aaPredicted RBP20.55■□□□□ 0.88
HMGN1-219ENST00000491183 PLEKHG4Q58EX7 1191 aa20.55■□□□□ 0.88
HMGN1-219ENST00000491183 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.55■□□□□ 0.884e-8■□□□□ 11
HMGN1-219ENST00000491183 CRYGNQ8WXF5 182 aa20.55■□□□□ 0.88
HMGN1-219ENST00000491183 PPM1EQ8WY54 764 aa20.55■□□□□ 0.88
HMGN1-219ENST00000491183 SMARCAD1Q9H4L7 1026 aa20.55■□□□□ 0.88
HMGN1-219ENST00000491183 CERS4Q9HA82 394 aa20.55■□□□□ 0.88
HMGN1-219ENST00000491183 AGO4Q9HCK5 861 aaKnown RBP20.55■□□□□ 0.88
HMGN1-219ENST00000491183 JPH1Q9HDC5 661 aaPredicted RBP20.55■□□□□ 0.88
HMGN1-219ENST00000491183 PPP4R2Q9NY27 417 aa20.55■□□□□ 0.88
HMGN1-219ENST00000491183 ERAP1Q9NZ08 941 aa20.55■□□□□ 0.88
HMGN1-219ENST00000491183 NFASCO94856 1347 aa20.54■□□□□ 0.88
HMGN1-219ENST00000491183 LCHNA4D1U4 455 aa20.54■□□□□ 0.88
HMGN1-219ENST00000491183 TLL1O43897 1013 aa20.54■□□□□ 0.88
HMGN1-219ENST00000491183 CAND2O75155 1236 aa20.54■□□□□ 0.88
HMGN1-219ENST00000491183 CTSHP09668 335 aa20.54■□□□□ 0.88
HMGN1-219ENST00000491183 CCT2P78371 535 aaKnown RBP20.54■□□□□ 0.88
HMGN1-219ENST00000491183 FAM26DQ5JW98 314 aa20.54■□□□□ 0.88
HMGN1-219ENST00000491183 SPRED2Q7Z698 418 aa20.54■□□□□ 0.88
HMGN1-219ENST00000491183 GLG1Q92896 1179 aa20.54■□□□□ 0.88
HMGN1-219ENST00000491183 COL25A1Q9BXS0 654 aaPredicted RBP20.54■□□□□ 0.88
HMGN1-219ENST00000491183 NCOA5Q9HCD5 579 aaKnown RBP20.54■□□□□ 0.88
HMGN1-219ENST00000491183 PRDM6Q9NQX0 595 aa20.54■□□□□ 0.88
HMGN1-219ENST00000491183 EPOPA6NHQ4 379 aa20.53■□□□□ 0.88
HMGN1-219ENST00000491183 FAM86B1E9PN63 330 aa20.53■□□□□ 0.88
HMGN1-219ENST00000491183 EFCAB14O75071 495 aa20.53■□□□□ 0.88
HMGN1-219ENST00000491183 FAM86B2P0C5J1 330 aa20.53■□□□□ 0.88
HMGN1-219ENST00000491183 IFNAR1P17181 557 aa20.53■□□□□ 0.88
HMGN1-219ENST00000491183 ACTR2P61160 394 aa20.53■□□□□ 0.88
HMGN1-219ENST00000491183 PPFIA1Q13136 1202 aa20.53■□□□□ 0.88
HMGN1-219ENST00000491183 MARCH8Q5T0T0 291 aa20.53■□□□□ 0.88
HMGN1-219ENST00000491183 RUFY4Q6ZNE9 571 aa20.53■□□□□ 0.88
HMGN1-219ENST00000491183 NIPA1Q7RTP0 329 aa20.53■□□□□ 0.88
HMGN1-219ENST00000491183 SDF4Q9BRK5 362 aa20.53■□□□□ 0.88
HMGN1-219ENST00000491183 LARP6Q9BRS8 491 aaKnown RBP20.53■□□□□ 0.88
HMGN1-219ENST00000491183 SLC26A6Q9BXS9 759 aa20.53■□□□□ 0.88
HMGN1-219ENST00000491183 RNF26Q9BY78 433 aaPredicted RBP20.53■□□□□ 0.88
HMGN1-219ENST00000491183 C6orf50Q9HD87 102 aa20.53■□□□□ 0.88
HMGN1-219ENST00000491183 MICAL3Q7RTP6 2002 aa20.53■□□□□ 0.88
HMGN1-219ENST00000491183 IGLV3-22A0A075B6J6 115 aa20.52■□□□□ 0.88
HMGN1-219ENST00000491183 ATG7O95352 703 aa20.52■□□□□ 0.88
HMGN1-219ENST00000491183 GJB5O95377 273 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms