RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-223ENST00000490833 TNFAIP1Q13829 316 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 SLC15A2Q16348 729 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 PPP2R5EQ16537 467 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 NFIL3Q16649 462 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 HSP90B2PQ58FF3 399 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 FAM26FQ5R3K3 315 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 CCDC122Q5T0U0 273 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 ANKRD40Q6AI12 368 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 WDR93Q6P2C0 686 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 RSRC2Q7L4I2 434 aaKnown RBP7.01□□□□□ -1.29
FN1-223ENST00000490833 CACNA2D4Q7Z3S7 1137 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 USP37Q86T82 979 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 FAM83AQ86UY5 434 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 C2CD5Q86YS7 1000 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 MTMR14Q8NCE2 650 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 AGBL3Q8NEM8 1001 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 FAM151AQ8WW52 585 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 ZNF622Q969S3 477 aaKnown RBP eCLIP7.01□□□□□ -1.29
FN1-223ENST00000490833 CNOT6LQ96LI5 555 aaKnown RBP7.01□□□□□ -1.29
FN1-223ENST00000490833 MED15Q96RN5 788 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 PSMD1Q99460 953 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 DEFB129Q9H1M3 183 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 TMEM60Q9H2L4 133 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 VIPAS39Q9H9C1 493 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 TUFT1Q9NNX1 390 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 KCNMB3Q9NPA1 279 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 KCNQ5Q9NR82 932 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 PANK4Q9NVE7 773 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 FEM1BQ9UK73 627 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 PCDHB3Q9Y5E6 796 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 SBF2Q86WG5 1849 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 SNED1Q8TER0 1413 aa7.01□□□□□ -1.29
FN1-223ENST00000490833 UBR3Q6ZT12 1888 aa7□□□□□ -1.29
FN1-223ENST00000490833 ECM29Q5VYK3 1845 aa7□□□□□ -1.29
FN1-223ENST00000490833 A0A087WWV3 80 aa7□□□□□ -1.29
FN1-223ENST00000490833 TTC26A0AVF1 554 aa7□□□□□ -1.29
FN1-223ENST00000490833 SOWAHDA6NJG2 315 aa7□□□□□ -1.29
FN1-223ENST00000490833 F5H6K3 240 aa7□□□□□ -1.29
FN1-223ENST00000490833 CES2O00748 559 aa7□□□□□ -1.29
FN1-223ENST00000490833 AKR1B10O60218 316 aa7□□□□□ -1.29
FN1-223ENST00000490833 LCA5LO95447 670 aa7□□□□□ -1.29
FN1-223ENST00000490833 SERPING1P05155 500 aa7□□□□□ -1.29
FN1-223ENST00000490833 MMP10P09238 476 aa7□□□□□ -1.29
FN1-223ENST00000490833 PLA2G4BP0C869 781 aa7□□□□□ -1.29
FN1-223ENST00000490833 MAPTP10636 758 aaKnown RBP7□□□□□ -1.29
FN1-223ENST00000490833 EEF2P13639 858 aaKnown RBP7□□□□□ -1.29
FN1-223ENST00000490833 IDEP14735 1019 aa7□□□□□ -1.29
FN1-223ENST00000490833 SREBF1P36956 1147 aa7□□□□□ -1.29
FN1-223ENST00000490833 FXR1P51114 621 aaKnown RBP eCLIP7□□□□□ -1.29
FN1-223ENST00000490833 STAT2P52630 851 aa7□□□□□ -1.29
FN1-223ENST00000490833 VAV2P52735 878 aa7□□□□□ -1.29
FN1-223ENST00000490833 KLRC3Q07444 240 aa7□□□□□ -1.29
FN1-223ENST00000490833 EHHADHQ08426 723 aa7□□□□□ -1.29
FN1-223ENST00000490833 IKQ13123 557 aaPredicted RBP7□□□□□ -1.29
FN1-223ENST00000490833 RASA3Q14644 834 aa7□□□□□ -1.29
FN1-223ENST00000490833 ELF2Q15723 593 aa7□□□□□ -1.29
FN1-223ENST00000490833 ERCC6LQ2NKX8 1250 aa7□□□□□ -1.29
FN1-223ENST00000490833 CCDC40Q4G0X9 1142 aa7□□□□□ -1.29
FN1-223ENST00000490833 HERC4Q5GLZ8 1057 aaPredicted RBP7□□□□□ -1.29
FN1-223ENST00000490833 DACT2Q5SW24 774 aa7□□□□□ -1.29
FN1-223ENST00000490833 SYDE2Q5VT97 1194 aa7□□□□□ -1.29
FN1-223ENST00000490833 PAPD7Q5XG87 772 aaKnown RBP7□□□□□ -1.29
FN1-223ENST00000490833 XRRA1Q6P2D8 792 aa7□□□□□ -1.29
FN1-223ENST00000490833 TOGARAM2Q6ZUX3 1019 aa7□□□□□ -1.29
FN1-223ENST00000490833 NIPA1Q7RTP0 329 aa7□□□□□ -1.29
FN1-223ENST00000490833 IRF2BP1Q8IU81 584 aa7□□□□□ -1.29
FN1-223ENST00000490833 SYT2Q8N9I0 419 aaPredicted RBP7□□□□□ -1.29
FN1-223ENST00000490833 SLC44A5Q8NCS7 719 aa7□□□□□ -1.29
FN1-223ENST00000490833 TMEM174Q8WUU8 243 aa7□□□□□ -1.29
FN1-223ENST00000490833 LPAR1Q92633 364 aa7□□□□□ -1.29
FN1-223ENST00000490833 SECISBP2LQ93073 1101 aaKnown RBP7□□□□□ -1.29
FN1-223ENST00000490833 KIFC2Q96AC6 838 aa7□□□□□ -1.29
FN1-223ENST00000490833 FAM81BQ96LP2 452 aa7□□□□□ -1.29
FN1-223ENST00000490833 NACC1Q96RE7 527 aa7□□□□□ -1.29
FN1-223ENST00000490833 MKNK1Q9BUB5 465 aa7□□□□□ -1.29
FN1-223ENST00000490833 CARD6Q9BX69 1037 aa7□□□□□ -1.29
FN1-223ENST00000490833 UBA5Q9GZZ9 404 aa7□□□□□ -1.29
FN1-223ENST00000490833 NHEJ1Q9H9Q4 299 aaPredicted RBP7□□□□□ -1.29
FN1-223ENST00000490833 GPCPD1Q9NPB8 672 aa7□□□□□ -1.29
FN1-223ENST00000490833 MED4Q9NPJ6 270 aa7□□□□□ -1.29
FN1-223ENST00000490833 LZTFL1Q9NQ48 299 aa7□□□□□ -1.29
FN1-223ENST00000490833 PLCB1Q9NQ66 1216 aa7□□□□□ -1.29
FN1-223ENST00000490833 NPDC1Q9NQX5 325 aaPredicted RBP7□□□□□ -1.29
FN1-223ENST00000490833 STK32BQ9NY57 414 aa7□□□□□ -1.29
FN1-223ENST00000490833 FAM53CQ9NYF3 392 aa7□□□□□ -1.29
FN1-223ENST00000490833 TAB2Q9NYJ8 693 aa7□□□□□ -1.29
FN1-223ENST00000490833 CEP72Q9P209 647 aa7□□□□□ -1.29
FN1-223ENST00000490833 TCEAL9Q9UHQ7 104 aa7□□□□□ -1.29
FN1-223ENST00000490833 RAB21Q9UL25 225 aa7□□□□□ -1.29
FN1-223ENST00000490833 JAG2Q9Y219 1238 aa7□□□□□ -1.29
FN1-223ENST00000490833 TRAF3IP3Q9Y228 551 aa7□□□□□ -1.29
FN1-223ENST00000490833 GDAQ9Y2T3 454 aa7□□□□□ -1.29
FN1-223ENST00000490833 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7□□□□□ -1.29
FN1-223ENST00000490833 LRRC37AA6NMS7 1700 aa7□□□□□ -1.29
FN1-223ENST00000490833 CASZ1Q86V15 1759 aa7□□□□□ -1.29
FN1-223ENST00000490833 FRMD3A2A2Y4 597 aa6.99□□□□□ -1.29
FN1-223ENST00000490833 BTNL10A8MVZ5 291 aa6.99□□□□□ -1.29
FN1-223ENST00000490833 GCOM1H8Y6P7 765 aaPredicted RBP6.99□□□□□ -1.29
FN1-223ENST00000490833 TRAF5O00463 557 aa6.99□□□□□ -1.29
FN1-223ENST00000490833 EIF3DO15371 548 aaKnown RBP eCLIP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms