RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 PSMD10O75832 226 aa12.31□□□□□ -0.44
VARS2-210ENST00000490699 RGS20O76081 388 aa12.31□□□□□ -0.44
VARS2-210ENST00000490699 PSAPP07602 524 aa12.31□□□□□ -0.44
VARS2-210ENST00000490699 CYBAP13498 195 aa12.31□□□□□ -0.44
VARS2-210ENST00000490699 KCNA2P16389 499 aa12.31□□□□□ -0.44
VARS2-210ENST00000490699 CPT1AP50416 773 aa12.31□□□□□ -0.44
VARS2-210ENST00000490699 SP4Q02446 784 aa12.31□□□□□ -0.44
VARS2-210ENST00000490699 CACNB2Q08289 660 aaPredicted RBP12.31□□□□□ -0.44
VARS2-210ENST00000490699 PPP2R5CQ13362 524 aa12.31□□□□□ -0.44
VARS2-210ENST00000490699 LY6KQ17RY6 165 aa12.31□□□□□ -0.44
VARS2-210ENST00000490699 PRAMEF19Q5SWL8 479 aa12.31□□□□□ -0.44
VARS2-210ENST00000490699 CELF3Q5SZQ8 465 aaKnown RBP12.31□□□□□ -0.44
VARS2-210ENST00000490699 FAM160B1Q5W0V3 765 aa12.31□□□□□ -0.44
VARS2-210ENST00000490699 ADALQ6DHV7 355 aa12.31□□□□□ -0.44
VARS2-210ENST00000490699 TAPT1Q6NXT6 567 aa12.31□□□□□ -0.44
VARS2-210ENST00000490699 CYFIP1Q7L576 1253 aa12.31□□□□□ -0.44
VARS2-210ENST00000490699 TMEM87AQ8NBN3 555 aa12.31□□□□□ -0.44
VARS2-210ENST00000490699 HAS1Q92839 578 aa12.31□□□□□ -0.44
VARS2-210ENST00000490699 CCDC43Q96MW1 224 aaKnown RBP12.31□□□□□ -0.44
VARS2-210ENST00000490699 SPATA33Q96N06 139 aa12.31□□□□□ -0.44
VARS2-210ENST00000490699 AZI2Q9H6S1 392 aa12.31□□□□□ -0.44
VARS2-210ENST00000490699 FBXO2Q9UK22 296 aaPredicted RBP12.31□□□□□ -0.44
VARS2-210ENST00000490699 Q9Y3F1 56 aa12.31□□□□□ -0.44
VARS2-210ENST00000490699 DDX49Q9Y6V7 483 aaKnown RBP12.31□□□□□ -0.44
VARS2-210ENST00000490699 BACH1O14867 736 aa12.3□□□□□ -0.44
VARS2-210ENST00000490699 DUSP11O75319 330 aaKnown RBP12.3□□□□□ -0.44
VARS2-210ENST00000490699 PRPF40AO75400 957 aaKnown RBP12.3□□□□□ -0.44
VARS2-210ENST00000490699 ZNF865P0CJ78 1059 aaPredicted RBP12.3□□□□□ -0.44
VARS2-210ENST00000490699 UBE2HP62256 183 aa12.3□□□□□ -0.44
VARS2-210ENST00000490699 TPRNQ4KMQ1 711 aa12.3□□□□□ -0.44
VARS2-210ENST00000490699 CCDC62Q6P9F0 684 aa12.3□□□□□ -0.44
VARS2-210ENST00000490699 TLK2Q86UE8 772 aa12.3□□□□□ -0.44
VARS2-210ENST00000490699 C4orf32Q8N8J7 132 aa12.3□□□□□ -0.44
VARS2-210ENST00000490699 SNX29Q8TEQ0 813 aa12.3□□□□□ -0.44
VARS2-210ENST00000490699 ATP6V0A1Q93050 837 aa12.3□□□□□ -0.44
VARS2-210ENST00000490699 EMID1Q96A84 441 aaPredicted RBP12.3□□□□□ -0.44
VARS2-210ENST00000490699 UIMC1Q96RL1 719 aa12.3□□□□□ -0.44
VARS2-210ENST00000490699 KATNBL1Q9H079 304 aa12.3□□□□□ -0.44
VARS2-210ENST00000490699 NT5C3AQ9H0P0 336 aa12.3□□□□□ -0.44
VARS2-210ENST00000490699 CSRNP2Q9H175 543 aa12.3□□□□□ -0.44
VARS2-210ENST00000490699 PDGFCQ9NRA1 345 aa12.3□□□□□ -0.44
VARS2-210ENST00000490699 DISC1Q9NRI5 854 aa12.3□□□□□ -0.44
VARS2-210ENST00000490699 PCDHA7Q9UN72 937 aa12.3□□□□□ -0.44
VARS2-210ENST00000490699 PCDHA10Q9Y5I2 948 aa12.3□□□□□ -0.44
VARS2-210ENST00000490699 A0A1W2PQ27 194 aa12.29□□□□□ -0.44
VARS2-210ENST00000490699 A0A1W2PQ64 194 aa12.29□□□□□ -0.44
VARS2-210ENST00000490699 A0A1W2PQD8 194 aa12.29□□□□□ -0.44
VARS2-210ENST00000490699 EDIL3O43854 480 aa12.29□□□□□ -0.44
VARS2-210ENST00000490699 ATP9AO75110 1047 aa12.29□□□□□ -0.44
VARS2-210ENST00000490699 FARP2O94887 1054 aaPredicted RBP12.29□□□□□ -0.44
VARS2-210ENST00000490699 SMPD1P17405 629 aa12.29□□□□□ -0.44
VARS2-210ENST00000490699 CCT6AP40227 531 aaKnown RBP12.29□□□□□ -0.44
VARS2-210ENST00000490699 ACTR2P61160 394 aa12.29□□□□□ -0.44
VARS2-210ENST00000490699 SEMA3FQ13275 785 aa12.29□□□□□ -0.44
VARS2-210ENST00000490699 ITGB3BPQ13352 177 aaPredicted RBP12.29□□□□□ -0.44
VARS2-210ENST00000490699 EPHA7Q15375 998 aa12.29□□□□□ -0.44
VARS2-210ENST00000490699 ZRSR1Q15695 479 aaKnown RBP12.29□□□□□ -0.44
VARS2-210ENST00000490699 CABP7Q86V35 215 aa12.29□□□□□ -0.44
VARS2-210ENST00000490699 KCTD17Q8N5Z5 321 aa12.29□□□□□ -0.44
VARS2-210ENST00000490699 IGSF22Q8N9C0 903 aa12.29□□□□□ -0.44
VARS2-210ENST00000490699 PPTC7Q8NI37 304 aa12.29□□□□□ -0.44
VARS2-210ENST00000490699 SEPT1Q8WYJ6 367 aa12.29□□□□□ -0.44
VARS2-210ENST00000490699 MRPS27Q92552 414 aaKnown RBP12.29□□□□□ -0.44
VARS2-210ENST00000490699 UNC45AQ9H3U1 944 aa12.29□□□□□ -0.44
VARS2-210ENST00000490699 DDX20Q9UHI6 824 aaKnown RBP12.29□□□□□ -0.44
VARS2-210ENST00000490699 VAV3Q9UKW4 847 aa12.29□□□□□ -0.44
VARS2-210ENST00000490699 ZNF215Q9UL58 517 aaPredicted RBP12.29□□□□□ -0.44
VARS2-210ENST00000490699 DYNC1LI2O43237 492 aaPredicted RBP12.28□□□□□ -0.44
VARS2-210ENST00000490699 ATMINO43313 823 aaPredicted RBP12.28□□□□□ -0.44
VARS2-210ENST00000490699 SORBS3O60504 671 aa12.28□□□□□ -0.44
VARS2-210ENST00000490699 KPNA6O60684 536 aa12.28□□□□□ -0.44
VARS2-210ENST00000490699 ARIH2O95376 493 aa12.28□□□□□ -0.44
VARS2-210ENST00000490699 MBD3O95983 291 aa12.28□□□□□ -0.44
VARS2-210ENST00000490699 C6orf222P0C671 652 aaPredicted RBP12.28□□□□□ -0.44
VARS2-210ENST00000490699 MUTP22033 750 aa12.28□□□□□ -0.44
VARS2-210ENST00000490699 CMA1P23946 247 aa12.28□□□□□ -0.44
VARS2-210ENST00000490699 CAP1Q01518 475 aa12.28□□□□□ -0.44
VARS2-210ENST00000490699 DGKDQ16760 1214 aa12.28□□□□□ -0.44
VARS2-210ENST00000490699 MAP3K21Q5TCX8 1036 aa12.28□□□□□ -0.44
VARS2-210ENST00000490699 RNF180Q86T96 592 aa12.28□□□□□ -0.44
VARS2-210ENST00000490699 CKAP2LQ8IYA6 745 aa12.28□□□□□ -0.44
VARS2-210ENST00000490699 FSIP1Q8NA03 581 aa12.28□□□□□ -0.44
VARS2-210ENST00000490699 SH3TC2Q8TF17 1288 aa12.28□□□□□ -0.44
VARS2-210ENST00000490699 GLG1Q92896 1179 aa12.28□□□□□ -0.44
VARS2-210ENST00000490699 GJA10Q969M2 543 aa12.28□□□□□ -0.44
VARS2-210ENST00000490699 CHAMP1Q96JM3 812 aa12.28□□□□□ -0.44
VARS2-210ENST00000490699 CLIC6Q96NY7 704 aa12.28□□□□□ -0.44
VARS2-210ENST00000490699 TUFT1Q9NNX1 390 aa12.28□□□□□ -0.44
VARS2-210ENST00000490699 XPNPEP3Q9NQH7 507 aa12.28□□□□□ -0.44
VARS2-210ENST00000490699 HOOK1Q9UJC3 728 aaKnown RBP12.28□□□□□ -0.44
VARS2-210ENST00000490699 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.27□□□□□ -0.45
VARS2-210ENST00000490699 DHX15O43143 795 aaKnown RBP12.27□□□□□ -0.45
VARS2-210ENST00000490699 IGHA2P01877 340 aa12.27□□□□□ -0.45
VARS2-210ENST00000490699 P4HBP07237 508 aaKnown RBP12.27□□□□□ -0.45
VARS2-210ENST00000490699 SUPT20HL2P0C7V6 817 aa12.27□□□□□ -0.45
VARS2-210ENST00000490699 CCND3P30281 292 aaPredicted RBP12.27□□□□□ -0.45
VARS2-210ENST00000490699 MCM4P33991 863 aa12.27□□□□□ -0.45
VARS2-210ENST00000490699 TCF7P36402 384 aaPredicted RBP12.27□□□□□ -0.45
VARS2-210ENST00000490699 QARSP47897 775 aaKnown RBP12.27□□□□□ -0.45
VARS2-210ENST00000490699 SLC26A2P50443 739 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms