RNA–Protein interactions for RNA: ENST00000490388.2

VAV3-206, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene VAV3, Length 2,271 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-206ENST00000490388 EMILIN3Q9NT22 766 aa11.29□□□□□ -0.6
VAV3-206ENST00000490388 SWAP70Q9UH65 585 aa11.29□□□□□ -0.6
VAV3-206ENST00000490388 PCDHA2Q9Y5H9 948 aa11.29□□□□□ -0.6
VAV3-206ENST00000490388 A0A087X0T9 212 aa11.29□□□□□ -0.6
VAV3-206ENST00000490388 GRID2IPA4D2P6 1211 aa11.29□□□□□ -0.6
VAV3-206ENST00000490388 BBOX1O75936 387 aa11.29□□□□□ -0.6
VAV3-206ENST00000490388 HEXIM1O94992 359 aaKnown RBP11.29□□□□□ -0.6
VAV3-206ENST00000490388 GLI1P08151 1106 aa11.29□□□□□ -0.6
VAV3-206ENST00000490388 FAM228BP0C875 321 aa11.29□□□□□ -0.6
VAV3-206ENST00000490388 EPB41P11171 864 aaKnown RBP11.29□□□□□ -0.6
VAV3-206ENST00000490388 CORO7P57737 925 aa11.29□□□□□ -0.6
VAV3-206ENST00000490388 GUCY2DQ02846 1103 aa11.29□□□□□ -0.6
VAV3-206ENST00000490388 PAK2Q13177 524 aa11.29□□□□□ -0.6
VAV3-206ENST00000490388 IFT81Q8WYA0 676 aa11.29□□□□□ -0.6
VAV3-206ENST00000490388 KCTD10Q9H3F6 313 aa11.29□□□□□ -0.6
VAV3-206ENST00000490388 EPB41L5Q9HCM4 733 aa11.29□□□□□ -0.6
VAV3-206ENST00000490388 DDX4Q9NQI0 724 aaKnown RBP11.29□□□□□ -0.6
VAV3-206ENST00000490388 PODXL2Q9NZ53 605 aa11.29□□□□□ -0.6
VAV3-206ENST00000490388 AIPL1Q9NZN9 384 aa11.29□□□□□ -0.6
VAV3-206ENST00000490388 ADAMTS1Q9UHI8 967 aa11.29□□□□□ -0.6
VAV3-206ENST00000490388 PCDHGC5Q9Y5F6 944 aa11.29□□□□□ -0.6
VAV3-206ENST00000490388 MYH7BA7E2Y1 1941 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 FOCADQ5VW36 1801 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 ANKRD65E5RJM6 399 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 CETN3O15182 167 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 CYP11B2P19099 503 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 CARSP49589 748 aaKnown RBP11.28□□□□□ -0.6
VAV3-206ENST00000490388 GNGT1P63211 74 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 MEI1Q5TIA1 1274 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 PPP4R3CPQ6ZMV5 832 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 GLT8D2Q9H1C3 349 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 GDF3Q9NR23 364 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 NFU1Q9UMS0 254 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 PACSIN2Q9UNF0 486 aaPredicted RBP11.28□□□□□ -0.6
VAV3-206ENST00000490388 ATF5Q9Y2D1 282 aaPredicted RBP11.28□□□□□ -0.6
VAV3-206ENST00000490388 ESYT3A0FGR9 886 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 USP17L15C9J2P7 530 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 USP17L13C9JLJ4 530 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 USP17L11C9JVI0 530 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 USP17L18D6R9N7 530 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 USP17L22D6RA61 530 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 USP17L17D6RBQ6 530 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 USP17L19D6RCP7 530 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 USP17L20D6RJB6 530 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 SLC26A4O43511 780 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 RAD21O60216 631 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 SHMT1P34896 483 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 USP17L24Q0WX57 530 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 KCNH2Q12809 1159 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 EDRF1Q3B7T1 1238 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 TTMPQ5BVD1 217 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 USP17L6PQ6QN14 398 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 TAF4BQ92750 862 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 ARL8AQ96BM9 186 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 CCDC43Q96MW1 224 aaKnown RBP11.28□□□□□ -0.6
VAV3-206ENST00000490388 ZIM3Q96PE6 472 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 KRT12Q99456 494 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 PACSIN1Q9BY11 444 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 GANQ9H2C0 597 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 USP40Q9NVE5 1235 aa11.28□□□□□ -0.6
VAV3-206ENST00000490388 AFF2P51816 1311 aa11.27□□□□□ -0.61
VAV3-206ENST00000490388 MYO3BQ8WXR4 1341 aa11.27□□□□□ -0.61
VAV3-206ENST00000490388 SHTN1A0MZ66 631 aa11.27□□□□□ -0.61
VAV3-206ENST00000490388 RIMBP2O15034 1052 aa11.27□□□□□ -0.61
VAV3-206ENST00000490388 EIF3HO15372 352 aaKnown RBP eCLIP11.27□□□□□ -0.61
VAV3-206ENST00000490388 SERPINB2P05120 415 aa11.27□□□□□ -0.61
VAV3-206ENST00000490388 NR2F2P24468 414 aa11.27□□□□□ -0.61
VAV3-206ENST00000490388 STAT3P40763 770 aa11.27□□□□□ -0.61
VAV3-206ENST00000490388 CCT5P48643 541 aa11.27□□□□□ -0.61
VAV3-206ENST00000490388 RNASE9P60153 205 aaKnown RBP11.27□□□□□ -0.61
VAV3-206ENST00000490388 CFAP58Q5T655 872 aa11.27□□□□□ -0.61
VAV3-206ENST00000490388 ZC3H3Q8IXZ2 948 aaKnown RBP11.27□□□□□ -0.61
VAV3-206ENST00000490388 BCAS4Q8TDM0 211 aa11.27□□□□□ -0.61
VAV3-206ENST00000490388 PPM1EQ8WY54 764 aa11.27□□□□□ -0.61
VAV3-206ENST00000490388 FAM107BQ9H098 131 aa11.27□□□□□ -0.61
VAV3-206ENST00000490388 KCNMB3Q9NPA1 279 aa11.27□□□□□ -0.61
VAV3-206ENST00000490388 HDAC9Q9UKV0 1011 aa11.27□□□□□ -0.61
VAV3-206ENST00000490388 TAF1LQ8IZX4 1826 aa11.27□□□□□ -0.61
VAV3-206ENST00000490388 PITPNM2Q9BZ72 1349 aa11.27□□□□□ -0.61
VAV3-206ENST00000490388 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.26□□□□□ -0.61
VAV3-206ENST00000490388 POTEFA5A3E0 1075 aa11.26□□□□□ -0.61
VAV3-206ENST00000490388 ZSCAN5CA6NGD5 496 aaPredicted RBP11.26□□□□□ -0.61
VAV3-206ENST00000490388 MED24O75448 989 aa11.26□□□□□ -0.61
VAV3-206ENST00000490388 HLA-DOAP06340 250 aa11.26□□□□□ -0.61
VAV3-206ENST00000490388 FAM153BP0C7A2 387 aa11.26□□□□□ -0.61
VAV3-206ENST00000490388 POTEIP0CG38 1075 aa11.26□□□□□ -0.61
VAV3-206ENST00000490388 USP11P51784 963 aa11.26□□□□□ -0.61
VAV3-206ENST00000490388 SLC12A3P55017 1021 aa11.26□□□□□ -0.61
VAV3-206ENST00000490388 TNNC1P63316 161 aa11.26□□□□□ -0.61
VAV3-206ENST00000490388 SF3B2Q13435 895 aaKnown RBP11.26□□□□□ -0.61
VAV3-206ENST00000490388 FAM153CQ494X1 144 aa11.26□□□□□ -0.61
VAV3-206ENST00000490388 POTEGQ6S5H5 508 aa11.26□□□□□ -0.61
VAV3-206ENST00000490388 POTEEQ6S8J3 1075 aa11.26□□□□□ -0.61
VAV3-206ENST00000490388 SLFN12Q8IYM2 578 aa11.26□□□□□ -0.61
VAV3-206ENST00000490388 INPP4AQ96PE3 977 aaPredicted RBP11.26□□□□□ -0.61
VAV3-206ENST00000490388 SPAG5Q96R06 1193 aa11.26□□□□□ -0.61
VAV3-206ENST00000490388 ANO3Q9BYT9 981 aa11.26□□□□□ -0.61
VAV3-206ENST00000490388 DHX36Q9H2U1 1008 aaKnown RBP11.26□□□□□ -0.61
VAV3-206ENST00000490388 FAM153AQ9UHL3 310 aa11.26□□□□□ -0.61
VAV3-206ENST00000490388 PCDHA1Q9Y5I3 950 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms