RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 C7orf61Q8IZ16 206 aa16.29■□□□□ 0.2
SRGAP3-208ENST00000490348 SEPT1Q8WYJ6 367 aa16.29■□□□□ 0.2
SRGAP3-208ENST00000490348 TBC1D22BQ9NU19 505 aa16.29■□□□□ 0.2
SRGAP3-208ENST00000490348 SYT1P21579 422 aa16.28■□□□□ 0.2
SRGAP3-208ENST00000490348 PSEN2P49810 448 aa16.28■□□□□ 0.2
SRGAP3-208ENST00000490348 NBR1Q14596 966 aa16.28■□□□□ 0.2
SRGAP3-208ENST00000490348 MFSD10Q14728 455 aa16.28■□□□□ 0.2
SRGAP3-208ENST00000490348 KIAA0753Q2KHM9 967 aa16.28■□□□□ 0.2
SRGAP3-208ENST00000490348 UTP14CQ5TAP6 766 aaKnown RBP16.28■□□□□ 0.2
SRGAP3-208ENST00000490348 MCTP1Q6DN14 999 aa16.28■□□□□ 0.2
SRGAP3-208ENST00000490348 B3GNT9Q6UX72 402 aa16.28■□□□□ 0.2
SRGAP3-208ENST00000490348 ABHD15Q6UXT9 468 aa16.28■□□□□ 0.2
SRGAP3-208ENST00000490348 FAM126BQ8IXS8 530 aa16.28■□□□□ 0.2
SRGAP3-208ENST00000490348 RIT2Q99578 217 aa16.28■□□□□ 0.2
SRGAP3-208ENST00000490348 IGKV6D-21A0A0A0MT36 114 aa16.27■□□□□ 0.2
SRGAP3-208ENST00000490348 H3BRB1 525 aa16.27■□□□□ 0.2
SRGAP3-208ENST00000490348 LGR5O75473 907 aa16.27■□□□□ 0.2
SRGAP3-208ENST00000490348 ATP2B1P20020 1258 aa16.27■□□□□ 0.2
SRGAP3-208ENST00000490348 CHMP4BP1P59074 171 aa16.27■□□□□ 0.2
SRGAP3-208ENST00000490348 FAAP100Q0VG06 881 aa16.27■□□□□ 0.2
SRGAP3-208ENST00000490348 GNL2Q13823 731 aaKnown RBP16.27■□□□□ 0.2
SRGAP3-208ENST00000490348 HIC1Q14526 733 aa16.27■□□□□ 0.2
SRGAP3-208ENST00000490348 LRCH2Q5VUJ6 765 aa16.27■□□□□ 0.2
SRGAP3-208ENST00000490348 NFRKBQ6P4R8 1299 aa16.27■□□□□ 0.2
SRGAP3-208ENST00000490348 TOX2Q96NM4 488 aa16.27■□□□□ 0.2
SRGAP3-208ENST00000490348 CTAGE1Q96RT6 745 aa16.27■□□□□ 0.2
SRGAP3-208ENST00000490348 TRPV6Q9H1D0 765 aa16.27■□□□□ 0.2
SRGAP3-208ENST00000490348 TMEM60Q9H2L4 133 aa16.27■□□□□ 0.2
SRGAP3-208ENST00000490348 UNC45AQ9H3U1 944 aa16.27■□□□□ 0.2
SRGAP3-208ENST00000490348 TUT1Q9H6E5 874 aaKnown RBP16.27■□□□□ 0.2
SRGAP3-208ENST00000490348 VAV3Q9UKW4 847 aa16.27■□□□□ 0.2
SRGAP3-208ENST00000490348 EMSYQ7Z589 1322 aa16.27■□□□□ 0.19
SRGAP3-208ENST00000490348 B4GALT4O60513 344 aa16.26■□□□□ 0.19
SRGAP3-208ENST00000490348 GAS7O60861 476 aa16.26■□□□□ 0.19
SRGAP3-208ENST00000490348 CD4P01730 458 aa16.26■□□□□ 0.19
SRGAP3-208ENST00000490348 ZNF746Q6NUN9 644 aaPredicted RBP16.26■□□□□ 0.19
SRGAP3-208ENST00000490348 SH3RF1Q7Z6J0 888 aa16.26■□□□□ 0.19
SRGAP3-208ENST00000490348 SPRYD3Q8NCJ5 442 aa16.26■□□□□ 0.19
SRGAP3-208ENST00000490348 MTMR9Q96QG7 549 aa16.26■□□□□ 0.19
SRGAP3-208ENST00000490348 NAP1L4Q99733 375 aaKnown RBP16.26■□□□□ 0.19
SRGAP3-208ENST00000490348 RNPEPQ9H4A4 650 aa16.26■□□□□ 0.19
SRGAP3-208ENST00000490348 PDLIM7Q9NR12 457 aa16.26■□□□□ 0.19
SRGAP3-208ENST00000490348 TRMT13Q9NUP7 481 aaKnown RBP16.26■□□□□ 0.19
SRGAP3-208ENST00000490348 TRIM43BA6NCK2 446 aa16.26■□□□□ 0.19
SRGAP3-208ENST00000490348 NEMFO60524 1076 aa16.26■□□□□ 0.19
SRGAP3-208ENST00000490348 SUPT20HL2P0C7V6 817 aa16.26■□□□□ 0.19
SRGAP3-208ENST00000490348 PDCP20941 246 aa16.26■□□□□ 0.19
SRGAP3-208ENST00000490348 MCM7P33993 719 aa16.26■□□□□ 0.19
SRGAP3-208ENST00000490348 KRT76Q01546 638 aa16.26■□□□□ 0.19
SRGAP3-208ENST00000490348 ZNF174Q15697 407 aa16.26■□□□□ 0.19
SRGAP3-208ENST00000490348 SESTD1Q86VW0 696 aa16.26■□□□□ 0.19
SRGAP3-208ENST00000490348 CCDC60Q8IWA6 550 aaPredicted RBP16.26■□□□□ 0.19
SRGAP3-208ENST00000490348 TRIM43Q96BQ3 446 aaPredicted RBP16.26■□□□□ 0.19
SRGAP3-208ENST00000490348 FAM20AQ96MK3 541 aa16.26■□□□□ 0.19
SRGAP3-208ENST00000490348 KATNAL1Q9BW62 490 aa16.26■□□□□ 0.19
SRGAP3-208ENST00000490348 TEKT3Q9BXF9 490 aa16.26■□□□□ 0.19
SRGAP3-208ENST00000490348 HDAC6Q9UBN7 1215 aa16.26■□□□□ 0.19
SRGAP3-208ENST00000490348 MTMR6Q9Y217 621 aa16.26■□□□□ 0.19
SRGAP3-208ENST00000490348 VPS37CA5D8V6 355 aaPredicted RBP16.25■□□□□ 0.19
SRGAP3-208ENST00000490348 H0YGN5 161 aa16.25■□□□□ 0.19
SRGAP3-208ENST00000490348 TBX3O15119 743 aa16.25■□□□□ 0.19
SRGAP3-208ENST00000490348 CHMP2AO43633 222 aa16.25■□□□□ 0.19
SRGAP3-208ENST00000490348 SYN1P17600 705 aa16.25■□□□□ 0.19
SRGAP3-208ENST00000490348 ITGB8P26012 769 aa16.25■□□□□ 0.19
SRGAP3-208ENST00000490348 HOXC8P31273 242 aa16.25■□□□□ 0.19
SRGAP3-208ENST00000490348 TRAPPC10P48553 1259 aa16.25■□□□□ 0.19
SRGAP3-208ENST00000490348 SPIRE1Q08AE8 756 aa16.25■□□□□ 0.19
SRGAP3-208ENST00000490348 FAM47CQ5HY64 1035 aa16.25■□□□□ 0.19
SRGAP3-208ENST00000490348 TTC38Q5R3I4 469 aa16.25■□□□□ 0.19
SRGAP3-208ENST00000490348 GDF6Q6KF10 455 aaPredicted RBP16.25■□□□□ 0.19
SRGAP3-208ENST00000490348 FERMT3Q86UX7 667 aa16.25■□□□□ 0.19
SRGAP3-208ENST00000490348 SMAP1Q8IYB5 467 aaPredicted RBP16.25■□□□□ 0.19
SRGAP3-208ENST00000490348 ZMYND8Q9ULU4 1186 aaPredicted RBP16.25■□□□□ 0.19
SRGAP3-208ENST00000490348 PCDHB6Q9Y5E3 794 aa16.25■□□□□ 0.19
SRGAP3-208ENST00000490348 MROH7Q68CQ1 1323 aa16.24■□□□□ 0.19
SRGAP3-208ENST00000490348 EML1O00423 815 aa16.24■□□□□ 0.19
SRGAP3-208ENST00000490348 CLTBP09497 229 aa16.24■□□□□ 0.19
SRGAP3-208ENST00000490348 ATP4AP20648 1035 aa16.24■□□□□ 0.19
SRGAP3-208ENST00000490348 MARK3P27448 753 aa16.24■□□□□ 0.19
SRGAP3-208ENST00000490348 PPP2R5CQ13362 524 aa16.24■□□□□ 0.19
SRGAP3-208ENST00000490348 CALCRLQ16602 461 aa16.24■□□□□ 0.19
SRGAP3-208ENST00000490348 C4orf32Q8N8J7 132 aa16.24■□□□□ 0.19
SRGAP3-208ENST00000490348 AFAP1L1Q8TED9 768 aa16.24■□□□□ 0.19
SRGAP3-208ENST00000490348 GLG1Q92896 1179 aa16.24■□□□□ 0.19
SRGAP3-208ENST00000490348 SEZ6LQ9BYH1 1024 aa16.24■□□□□ 0.19
SRGAP3-208ENST00000490348 SMARCAD1Q9H4L7 1026 aa16.24■□□□□ 0.19
SRGAP3-208ENST00000490348 DISC1Q9NRI5 854 aa16.24■□□□□ 0.19
SRGAP3-208ENST00000490348 GTF2IRD1Q9UHL9 959 aa16.24■□□□□ 0.19
SRGAP3-208ENST00000490348 TBX21Q9UL17 535 aa16.24■□□□□ 0.19
SRGAP3-208ENST00000490348 PCDHA10Q9Y5I2 948 aa16.24■□□□□ 0.19
SRGAP3-208ENST00000490348 DCDC2CA8MYV0 355 aa16.23■□□□□ 0.19
SRGAP3-208ENST00000490348 WDR64B1ANS9 1081 aa16.23■□□□□ 0.19
SRGAP3-208ENST00000490348 SMIM10L2AP0DMW4 78 aa16.23■□□□□ 0.19
SRGAP3-208ENST00000490348 SMIM10L2BP0DMW5 78 aa16.23■□□□□ 0.19
SRGAP3-208ENST00000490348 STAT5BP51692 787 aa16.23■□□□□ 0.19
SRGAP3-208ENST00000490348 ZNF200P98182 395 aaPredicted RBP16.23■□□□□ 0.19
SRGAP3-208ENST00000490348 UGCGQ16739 394 aa16.23■□□□□ 0.19
SRGAP3-208ENST00000490348 SWSAP1Q6NVH7 229 aa16.23■□□□□ 0.19
SRGAP3-208ENST00000490348 MIS18BP1Q6P0N0 1132 aa16.23■□□□□ 0.19
SRGAP3-208ENST00000490348 PLPPR4Q7Z2D5 763 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms