RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 MSANTD4Q8NCY6 345 aa16.54■□□□□ 0.24
COL9A1-208ENST00000489611 LENG9Q96B70 501 aa16.54■□□□□ 0.24
COL9A1-208ENST00000489611 MYOZ2Q9NPC6 264 aa16.54■□□□□ 0.24
COL9A1-208ENST00000489611 LUC7LQ9NQ29 371 aaKnown RBP16.54■□□□□ 0.24
COL9A1-208ENST00000489611 EMILIN3Q9NT22 766 aa16.54■□□□□ 0.24
COL9A1-208ENST00000489611 SSU72P8A0A1W2PR75 194 aa16.53■□□□□ 0.24
COL9A1-208ENST00000489611 WNT10BO00744 389 aa16.53■□□□□ 0.24
COL9A1-208ENST00000489611 MCM3P25205 808 aa16.53■□□□□ 0.24
COL9A1-208ENST00000489611 AMPD2Q01433 879 aa16.53■□□□□ 0.24
COL9A1-208ENST00000489611 CKAP4Q07065 602 aaKnown RBP16.53■□□□□ 0.24
COL9A1-208ENST00000489611 USH1GQ495M9 461 aa16.53■□□□□ 0.24
COL9A1-208ENST00000489611 SPDYE2Q495Y8 402 aa16.53■□□□□ 0.24
COL9A1-208ENST00000489611 UTP14CQ5TAP6 766 aaKnown RBP16.53■□□□□ 0.24
COL9A1-208ENST00000489611 PAPD7Q5XG87 772 aaKnown RBP16.53■□□□□ 0.24
COL9A1-208ENST00000489611 PURBQ96QR8 312 aaKnown RBP16.53■□□□□ 0.24
COL9A1-208ENST00000489611 GBP3Q9H0R5 595 aa16.53■□□□□ 0.24
COL9A1-208ENST00000489611 MMRN2Q9H8L6 949 aa16.53■□□□□ 0.24
COL9A1-208ENST00000489611 VEZTQ9HBM0 779 aa16.53■□□□□ 0.24
COL9A1-208ENST00000489611 CEP72Q9P209 647 aa16.53■□□□□ 0.24
COL9A1-208ENST00000489611 CETN3O15182 167 aa16.53■□□□□ 0.24
COL9A1-208ENST00000489611 MED24O75448 989 aa16.53■□□□□ 0.24
COL9A1-208ENST00000489611 PNMA6AP0CW24 399 aaPredicted RBP16.53■□□□□ 0.24
COL9A1-208ENST00000489611 LMNB1P20700 586 aa16.53■□□□□ 0.24
COL9A1-208ENST00000489611 ZNF76P36508 570 aa16.53■□□□□ 0.24
COL9A1-208ENST00000489611 MICALL2Q8IY33 904 aa16.53■□□□□ 0.24
COL9A1-208ENST00000489611 TRIM58Q8NG06 486 aa16.53■□□□□ 0.24
COL9A1-208ENST00000489611 EEF2KMTQ96G04 330 aa16.53■□□□□ 0.24
COL9A1-208ENST00000489611 ZBED3Q96IU2 234 aaPredicted RBP16.53■□□□□ 0.24
COL9A1-208ENST00000489611 PARD6BQ9BYG5 372 aa16.53■□□□□ 0.24
COL9A1-208ENST00000489611 KCTD10Q9H3F6 313 aa16.53■□□□□ 0.24
COL9A1-208ENST00000489611 TUFT1Q9NNX1 390 aa16.53■□□□□ 0.24
COL9A1-208ENST00000489611 RAB21Q9UL25 225 aa16.53■□□□□ 0.24
COL9A1-208ENST00000489611 SCAF8Q9UPN6 1271 aaKnown RBP16.53■□□□□ 0.24
COL9A1-208ENST00000489611 TRAF3IP3Q9Y228 551 aa16.53■□□□□ 0.24
COL9A1-208ENST00000489611 MRPL11Q9Y3B7 192 aaKnown RBP16.53■□□□□ 0.24
COL9A1-208ENST00000489611 FHOD1Q9Y613 1164 aa16.53■□□□□ 0.24
COL9A1-208ENST00000489611 SAR1BQ9Y6B6 198 aa16.53■□□□□ 0.24
COL9A1-208ENST00000489611 LOXHD1Q8IVV2 1947 aa16.52■□□□□ 0.24
COL9A1-208ENST00000489611 A0A0U1RQJ8 604 aa16.52■□□□□ 0.23
COL9A1-208ENST00000489611 GAP43P17677 238 aa16.52■□□□□ 0.23
COL9A1-208ENST00000489611 RPS12P25398 132 aaKnown RBP16.52■□□□□ 0.23
COL9A1-208ENST00000489611 NCAPH2Q6IBW4 605 aa16.52■□□□□ 0.23
COL9A1-208ENST00000489611 IQCEQ6IPM2 695 aa16.52■□□□□ 0.23
COL9A1-208ENST00000489611 CC2D1AQ6P1N0 951 aaPredicted RBP16.52■□□□□ 0.23
COL9A1-208ENST00000489611 TRAPPC11Q7Z392 1133 aa16.52■□□□□ 0.23
COL9A1-208ENST00000489611 SAMD7Q7Z3H4 446 aa16.52■□□□□ 0.23
COL9A1-208ENST00000489611 CACNA2D4Q7Z3S7 1137 aa16.52■□□□□ 0.23
COL9A1-208ENST00000489611 TRIM59Q8IWR1 403 aa16.52■□□□□ 0.23
COL9A1-208ENST00000489611 MSL3Q8N5Y2 521 aaKnown RBP16.52■□□□□ 0.23
COL9A1-208ENST00000489611 ATRIPQ8WXE1 791 aa16.52■□□□□ 0.23
COL9A1-208ENST00000489611 DEF6Q9H4E7 631 aa16.52■□□□□ 0.23
COL9A1-208ENST00000489611 A0A1W2PRG0 241 aa16.51■□□□□ 0.23
COL9A1-208ENST00000489611 FAM86B1E9PN63 330 aa16.51■□□□□ 0.23
COL9A1-208ENST00000489611 FAM86B2P0C5J1 330 aa16.51■□□□□ 0.23
COL9A1-208ENST00000489611 ZNF280AP59817 542 aaPredicted RBP16.51■□□□□ 0.23
COL9A1-208ENST00000489611 MAPK8IP2Q13387 824 aaPredicted RBP16.51■□□□□ 0.23
COL9A1-208ENST00000489611 SHROOM1Q2M3G4 852 aaPredicted RBP16.51■□□□□ 0.23
COL9A1-208ENST00000489611 SCFD1Q8WVM8 642 aa16.51■□□□□ 0.23
COL9A1-208ENST00000489611 TANGO6Q9C0B7 1094 aa16.51■□□□□ 0.23
COL9A1-208ENST00000489611 DEFB129Q9H1M3 183 aa16.51■□□□□ 0.23
COL9A1-208ENST00000489611 RANBP17Q9H2T7 1088 aaKnown RBP16.51■□□□□ 0.23
COL9A1-208ENST00000489611 FAM207AQ9NSI2 230 aaPredicted RBP16.51■□□□□ 0.23
COL9A1-208ENST00000489611 KCND2Q9NZV8 630 aa16.51■□□□□ 0.23
COL9A1-208ENST00000489611 CNOT7Q9UIV1 285 aaKnown RBP16.51■□□□□ 0.23
COL9A1-208ENST00000489611 ZBTB21Q9ULJ3 1066 aa16.51■□□□□ 0.23
COL9A1-208ENST00000489611 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.51■□□□□ 0.23
COL9A1-208ENST00000489611 GCOM1H8Y6P7 765 aaPredicted RBP16.51■□□□□ 0.23
COL9A1-208ENST00000489611 PDXKO00764 312 aa16.51■□□□□ 0.23
COL9A1-208ENST00000489611 OPLAHO14841 1288 aa16.51■□□□□ 0.23
COL9A1-208ENST00000489611 MSH4O15457 936 aa16.51■□□□□ 0.23
COL9A1-208ENST00000489611 CALUO43852 315 aaPredicted RBP16.51■□□□□ 0.23
COL9A1-208ENST00000489611 EYA4O95677 639 aa16.51■□□□□ 0.23
COL9A1-208ENST00000489611 POLR2MP0CAP2 368 aa16.51■□□□□ 0.23
COL9A1-208ENST00000489611 SPATA31C1P0DKV0 1188 aa16.51■□□□□ 0.23
COL9A1-208ENST00000489611 RPL13P26373 211 aaKnown RBP16.51■□□□□ 0.23
COL9A1-208ENST00000489611 KLK7P49862 253 aa16.51■□□□□ 0.23
COL9A1-208ENST00000489611 SETQ01105 290 aaPredicted RBP16.51■□□□□ 0.23
COL9A1-208ENST00000489611 GIT2Q14161 759 aa16.51■□□□□ 0.23
COL9A1-208ENST00000489611 LRRC41Q15345 812 aa16.51■□□□□ 0.23
COL9A1-208ENST00000489611 BMT2Q1RMZ1 405 aa16.51■□□□□ 0.23
COL9A1-208ENST00000489611 ARSHQ5FYA8 562 aa16.51■□□□□ 0.23
COL9A1-208ENST00000489611 FRMD5Q7Z6J6 570 aa16.51■□□□□ 0.23
COL9A1-208ENST00000489611 SECISBP2LQ93073 1101 aaKnown RBP16.51■□□□□ 0.23
COL9A1-208ENST00000489611 IFIH1Q9BYX4 1025 aaKnown RBP16.51■□□□□ 0.23
COL9A1-208ENST00000489611 VCPKMTQ9H867 229 aa16.51■□□□□ 0.23
COL9A1-208ENST00000489611 FEM1BQ9UK73 627 aa16.51■□□□□ 0.23
COL9A1-208ENST00000489611 VAV3Q9UKW4 847 aa16.51■□□□□ 0.23
COL9A1-208ENST00000489611 CNTNAP1P78357 1384 aa16.5■□□□□ 0.23
COL9A1-208ENST00000489611 POTEFA5A3E0 1075 aa16.5■□□□□ 0.23
COL9A1-208ENST00000489611 POTEIP0CG38 1075 aa16.5■□□□□ 0.23
COL9A1-208ENST00000489611 PRLRP16471 622 aa16.5■□□□□ 0.23
COL9A1-208ENST00000489611 ZSCAN20P17040 1043 aaPredicted RBP16.5■□□□□ 0.23
COL9A1-208ENST00000489611 PPP2R5CQ13362 524 aa16.5■□□□□ 0.23
COL9A1-208ENST00000489611 ADAM9Q13443 819 aa16.5■□□□□ 0.23
COL9A1-208ENST00000489611 KNOP1Q1ED39 458 aaKnown RBP16.5■□□□□ 0.23
COL9A1-208ENST00000489611 TBC1D10BQ4KMP7 808 aaPredicted RBP16.5■□□□□ 0.23
COL9A1-208ENST00000489611 PDXDC1Q6P996 788 aa16.5■□□□□ 0.23
COL9A1-208ENST00000489611 POTEGQ6S5H5 508 aa16.5■□□□□ 0.23
COL9A1-208ENST00000489611 POTEEQ6S8J3 1075 aa16.5■□□□□ 0.23
COL9A1-208ENST00000489611 CDAN1Q8IWY9 1227 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms