RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 ERICH6Q7L0X2 663 aa9.18□□□□□ -0.94
EXOSC3-206ENST00000489414 OTOP3Q7RTS5 596 aa9.18□□□□□ -0.94
EXOSC3-206ENST00000489414 ATG9AQ7Z3C6 839 aa9.18□□□□□ -0.94
EXOSC3-206ENST00000489414 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.18□□□□□ -0.94
EXOSC3-206ENST00000489414 CRELD1Q96HD1 420 aa9.18□□□□□ -0.94
EXOSC3-206ENST00000489414 GTF2IRD1Q9UHL9 959 aa9.18□□□□□ -0.94
EXOSC3-206ENST00000489414 SDK1Q7Z5N4 2213 aa9.17□□□□□ -0.94
EXOSC3-206ENST00000489414 A6NJR5 290 aa9.17□□□□□ -0.94
EXOSC3-206ENST00000489414 F5H6K3 240 aa9.17□□□□□ -0.94
EXOSC3-206ENST00000489414 MAFO75444 373 aaPredicted RBP9.17□□□□□ -0.94
EXOSC3-206ENST00000489414 ZNF806P0C7X5 589 aa9.17□□□□□ -0.94
EXOSC3-206ENST00000489414 CEACAM1P13688 526 aa9.17□□□□□ -0.94
EXOSC3-206ENST00000489414 VASPP50552 380 aaPredicted RBP9.17□□□□□ -0.94
EXOSC3-206ENST00000489414 ERVFC1P60507 584 aa9.17□□□□□ -0.94
EXOSC3-206ENST00000489414 SCAPQ12770 1279 aa9.17□□□□□ -0.94
EXOSC3-206ENST00000489414 KRTAP21-3Q3LHN1 58 aa9.17□□□□□ -0.94
EXOSC3-206ENST00000489414 BRDTQ58F21 947 aaPredicted RBP9.17□□□□□ -0.94
EXOSC3-206ENST00000489414 COLEC12Q5KU26 742 aa9.17□□□□□ -0.94
EXOSC3-206ENST00000489414 PDE12Q6L8Q7 609 aaKnown RBP9.17□□□□□ -0.94
EXOSC3-206ENST00000489414 EEPD1Q7L9B9 569 aa9.17□□□□□ -0.94
EXOSC3-206ENST00000489414 KAZALD1Q96I82 304 aa9.17□□□□□ -0.94
EXOSC3-206ENST00000489414 EHD4Q9H223 541 aa9.17□□□□□ -0.94
EXOSC3-206ENST00000489414 BCAS3Q9H6U6 928 aa9.17□□□□□ -0.94
EXOSC3-206ENST00000489414 AAASQ9NRG9 546 aa9.17□□□□□ -0.94
EXOSC3-206ENST00000489414 SAP30BPQ9UHR5 308 aaKnown RBP9.17□□□□□ -0.94
EXOSC3-206ENST00000489414 SERPINB13Q9UIV8 391 aa9.17□□□□□ -0.94
EXOSC3-206ENST00000489414 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.17□□□□□ -0.94
EXOSC3-206ENST00000489414 FRMPD2Q68DX3 1309 aaPredicted RBP9.16□□□□□ -0.94
EXOSC3-206ENST00000489414 CAPN8A6NHC0 703 aa9.16□□□□□ -0.94
EXOSC3-206ENST00000489414 RSPH10B2B2RC85 870 aa9.16□□□□□ -0.94
EXOSC3-206ENST00000489414 USP17L12C9JPN9 530 aa9.16□□□□□ -0.94
EXOSC3-206ENST00000489414 USP17L21D6R901 530 aa9.16□□□□□ -0.94
EXOSC3-206ENST00000489414 GRM8O00222 908 aa9.16□□□□□ -0.94
EXOSC3-206ENST00000489414 ATP2A1O14983 1001 aa9.16□□□□□ -0.94
EXOSC3-206ENST00000489414 TREHO43280 583 aa9.16□□□□□ -0.94
EXOSC3-206ENST00000489414 LILRB3O75022 631 aa9.16□□□□□ -0.94
EXOSC3-206ENST00000489414 DGKIO75912 1065 aa9.16□□□□□ -0.94
EXOSC3-206ENST00000489414 RSPH10BP0C881 870 aa9.16□□□□□ -0.94
EXOSC3-206ENST00000489414 SHMT1P34896 483 aa9.16□□□□□ -0.94
EXOSC3-206ENST00000489414 CHMP4BP1P59074 171 aa9.16□□□□□ -0.94
EXOSC3-206ENST00000489414 SIM2Q14190 667 aaPredicted RBP9.16□□□□□ -0.94
EXOSC3-206ENST00000489414 ATAT1Q5SQI0 421 aa9.16□□□□□ -0.94
EXOSC3-206ENST00000489414 C8orf58Q8NAV2 365 aa9.16□□□□□ -0.94
EXOSC3-206ENST00000489414 OR6J1Q8NGC5 347 aa9.16□□□□□ -0.94
EXOSC3-206ENST00000489414 WHAMMQ8TF30 809 aa9.16□□□□□ -0.94
EXOSC3-206ENST00000489414 RSAD2Q8WXG1 361 aa9.16□□□□□ -0.94
EXOSC3-206ENST00000489414 GPR20Q99678 358 aa9.16□□□□□ -0.94
EXOSC3-206ENST00000489414 DDX23Q9BUQ8 820 aaKnown RBP9.16□□□□□ -0.94
EXOSC3-206ENST00000489414 CHMP4AQ9BY43 222 aa9.16□□□□□ -0.94
EXOSC3-206ENST00000489414 OSBPL7Q9BZF2 842 aa9.16□□□□□ -0.94
EXOSC3-206ENST00000489414 VCPKMTQ9H867 229 aa9.16□□□□□ -0.94
EXOSC3-206ENST00000489414 VTA1Q9NP79 307 aa9.16□□□□□ -0.94
EXOSC3-206ENST00000489414 RAXQ9Y2V3 346 aa9.16□□□□□ -0.94
EXOSC3-206ENST00000489414 RAD50Q92878 1312 aa9.15□□□□□ -0.94
EXOSC3-206ENST00000489414 KANSL1LA0AUZ9 987 aa9.15□□□□□ -0.94
EXOSC3-206ENST00000489414 PPFIA3O75145 1194 aa9.15□□□□□ -0.94
EXOSC3-206ENST00000489414 NRLP54845 237 aa9.15□□□□□ -0.94
EXOSC3-206ENST00000489414 NONOQ15233 471 aaKnown RBP eCLIP9.15□□□□□ -0.94
EXOSC3-206ENST00000489414 SLC44A3Q8N4M1 653 aa9.15□□□□□ -0.94
EXOSC3-206ENST00000489414 KLHDC4Q8TBB5 520 aa9.15□□□□□ -0.94
EXOSC3-206ENST00000489414 APBB2Q92870 758 aa9.15□□□□□ -0.94
EXOSC3-206ENST00000489414 OSBPL6Q9BZF3 934 aa9.15□□□□□ -0.94
EXOSC3-206ENST00000489414 WDR11Q9BZH6 1224 aa9.15□□□□□ -0.94
EXOSC3-206ENST00000489414 AATFQ9NY61 560 aaKnown RBP eCLIP9.15□□□□□ -0.94
EXOSC3-206ENST00000489414 MTF2Q9Y483 593 aaPredicted RBP9.15□□□□□ -0.94
EXOSC3-206ENST00000489414 HCFC2Q9Y5Z7 792 aa9.15□□□□□ -0.94
EXOSC3-206ENST00000489414 SETD2Q9BYW2 2564 aaPredicted RBP9.14□□□□□ -0.95
EXOSC3-206ENST00000489414 LCTP09848 1927 aa9.14□□□□□ -0.95
EXOSC3-206ENST00000489414 CCER2I3L3R5 266 aa9.14□□□□□ -0.95
EXOSC3-206ENST00000489414 ZNF853P0CG23 659 aa9.14□□□□□ -0.95
EXOSC3-206ENST00000489414 PDAP1Q13442 181 aaKnown RBP9.14□□□□□ -0.95
EXOSC3-206ENST00000489414 RARS2Q5T160 578 aaKnown RBP9.14□□□□□ -0.95
EXOSC3-206ENST00000489414 RNF43Q68DV7 783 aa9.14□□□□□ -0.95
EXOSC3-206ENST00000489414 CCDC149Q6ZUS6 474 aa9.14□□□□□ -0.95
EXOSC3-206ENST00000489414 SIAH1Q8IUQ4 282 aa9.14□□□□□ -0.95
EXOSC3-206ENST00000489414 CMTR2Q8IYT2 770 aaKnown RBP9.14□□□□□ -0.95
EXOSC3-206ENST00000489414 AFG1LQ8WV93 481 aa9.14□□□□□ -0.95
EXOSC3-206ENST00000489414 SHDQ96IW2 340 aa9.14□□□□□ -0.95
EXOSC3-206ENST00000489414 KLHL5Q96PQ7 755 aa9.14□□□□□ -0.95
EXOSC3-206ENST00000489414 FBXO40Q9UH90 709 aa9.14□□□□□ -0.95
EXOSC3-206ENST00000489414 TMX2Q9Y320 296 aa9.14□□□□□ -0.95
EXOSC3-206ENST00000489414 CACNA1EQ15878 2313 aa9.14□□□□□ -0.95
EXOSC3-206ENST00000489414 SPAG17Q6Q759 2223 aa9.13□□□□□ -0.95
EXOSC3-206ENST00000489414 DOCK8Q8NF50 2099 aa9.13□□□□□ -0.95
EXOSC3-206ENST00000489414 HIDE1A8MVS5 230 aa9.13□□□□□ -0.95
EXOSC3-206ENST00000489414 CSRP1P21291 193 aaKnown RBP9.13□□□□□ -0.95
EXOSC3-206ENST00000489414 RABL6Q3YEC7 729 aaPredicted RBP9.13□□□□□ -0.95
EXOSC3-206ENST00000489414 BEND3Q5T5X7 828 aa9.13□□□□□ -0.95
EXOSC3-206ENST00000489414 PLPP4Q5VZY2 271 aa9.13□□□□□ -0.95
EXOSC3-206ENST00000489414 CCDC102BQ68D86 513 aa9.13□□□□□ -0.95
EXOSC3-206ENST00000489414 RASGRP2Q7LDG7 609 aa9.13□□□□□ -0.95
EXOSC3-206ENST00000489414 FAM160A2Q8N612 972 aaPredicted RBP9.13□□□□□ -0.95
EXOSC3-206ENST00000489414 CHST13Q8NET6 341 aa9.13□□□□□ -0.95
EXOSC3-206ENST00000489414 FEZF2Q8TBJ5 459 aa9.13□□□□□ -0.95
EXOSC3-206ENST00000489414 MORC4Q8TE76 937 aa9.13□□□□□ -0.95
EXOSC3-206ENST00000489414 SPIRE2Q8WWL2 714 aa9.13□□□□□ -0.95
EXOSC3-206ENST00000489414 KAT2BQ92831 832 aa9.13□□□□□ -0.95
EXOSC3-206ENST00000489414 SUCLG2Q96I99 432 aa9.13□□□□□ -0.95
EXOSC3-206ENST00000489414 CCDC86Q9H6F5 360 aaKnown RBP9.13□□□□□ -0.95
EXOSC3-206ENST00000489414 SLC2A4RGQ9NR83 387 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms