RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 ICAM3P32942 547 aa10.85□□□□□ -0.67
SSBP1-212ENST00000489378 SLC16A2P36021 539 aa10.85□□□□□ -0.67
SSBP1-212ENST00000489378 RPS6P62753 249 aaKnown RBP10.85□□□□□ -0.67
SSBP1-212ENST00000489378 COASYQ13057 564 aa10.85□□□□□ -0.67
SSBP1-212ENST00000489378 PTPN21Q16825 1174 aa10.85□□□□□ -0.67
SSBP1-212ENST00000489378 KIAA0753Q2KHM9 967 aa10.85□□□□□ -0.67
SSBP1-212ENST00000489378 TTBK2Q6IQ55 1244 aa10.85□□□□□ -0.67
SSBP1-212ENST00000489378 GIMAP6Q6P9H5 292 aa10.85□□□□□ -0.67
SSBP1-212ENST00000489378 RNF207Q6ZRF8 634 aa10.85□□□□□ -0.67
SSBP1-212ENST00000489378 ADGRD2Q7Z7M1 963 aa10.85□□□□□ -0.67
SSBP1-212ENST00000489378 CLASRPQ8N2M8 674 aaKnown RBP10.85□□□□□ -0.67
SSBP1-212ENST00000489378 TMEM105Q8N8V8 129 aa10.85□□□□□ -0.67
SSBP1-212ENST00000489378 SEPT8Q92599 483 aa10.85□□□□□ -0.67
SSBP1-212ENST00000489378 NKD2Q969F2 451 aaPredicted RBP10.85□□□□□ -0.67
SSBP1-212ENST00000489378 IL17RAQ96F46 866 aa10.85□□□□□ -0.67
SSBP1-212ENST00000489378 HAUS7Q99871 368 aa10.85□□□□□ -0.67
SSBP1-212ENST00000489378 MTMR7Q9Y216 660 aa10.85□□□□□ -0.67
SSBP1-212ENST00000489378 SPTBN2O15020 2390 aa10.85□□□□□ -0.67
SSBP1-212ENST00000489378 GLP2RO95838 553 aa10.84□□□□□ -0.67
SSBP1-212ENST00000489378 MMP1P03956 469 aa10.84□□□□□ -0.67
SSBP1-212ENST00000489378 DNAJB1P25685 340 aa10.84□□□□□ -0.67
SSBP1-212ENST00000489378 TFAP4Q01664 338 aa10.84□□□□□ -0.67
SSBP1-212ENST00000489378 DGKDQ16760 1214 aa10.84□□□□□ -0.67
SSBP1-212ENST00000489378 SEPT14Q6ZU15 432 aa10.84□□□□□ -0.67
SSBP1-212ENST00000489378 TTC13Q8NBP0 860 aa10.84□□□□□ -0.67
SSBP1-212ENST00000489378 RMDN1Q96DB5 314 aa10.84□□□□□ -0.67
SSBP1-212ENST00000489378 RIPOR3Q96MK2 946 aa10.84□□□□□ -0.67
SSBP1-212ENST00000489378 PHF7Q9BWX1 381 aaPredicted RBP10.84□□□□□ -0.67
SSBP1-212ENST00000489378 ZNF287Q9HBT7 754 aa10.84□□□□□ -0.67
SSBP1-212ENST00000489378 NPDC1Q9NQX5 325 aaPredicted RBP10.84□□□□□ -0.67
SSBP1-212ENST00000489378 BARX2Q9UMQ3 279 aaPredicted RBP10.84□□□□□ -0.67
SSBP1-212ENST00000489378 ZFHX4Q86UP3 3567 aa10.84□□□□□ -0.67
SSBP1-212ENST00000489378 MYO10Q9HD67 2058 aa10.84□□□□□ -0.67
SSBP1-212ENST00000489378 NMT2O60551 498 aa10.84□□□□□ -0.67
SSBP1-212ENST00000489378 F2P00734 622 aa10.84□□□□□ -0.67
SSBP1-212ENST00000489378 ATP5JP18859 108 aa10.84□□□□□ -0.67
SSBP1-212ENST00000489378 TDO2P48775 406 aa10.84□□□□□ -0.67
SSBP1-212ENST00000489378 CCDC96Q2M329 555 aa10.84□□□□□ -0.67
SSBP1-212ENST00000489378 ZKSCAN2Q63HK3 967 aa10.84□□□□□ -0.67
SSBP1-212ENST00000489378 SERINC5Q86VE9 423 aa10.84□□□□□ -0.67
SSBP1-212ENST00000489378 EFHBQ8N7U6 833 aa10.84□□□□□ -0.67
SSBP1-212ENST00000489378 DNERQ8NFT8 737 aa10.84□□□□□ -0.67
SSBP1-212ENST00000489378 MPHOSPH6Q99547 160 aaKnown RBP10.84□□□□□ -0.67
SSBP1-212ENST00000489378 KIAA1217Q5T5P2 1943 aa10.83□□□□□ -0.68
SSBP1-212ENST00000489378 MYH7BA7E2Y1 1941 aa10.83□□□□□ -0.68
SSBP1-212ENST00000489378 CTSHP09668 335 aa10.83□□□□□ -0.68
SSBP1-212ENST00000489378 NRIP1P48552 1158 aa10.83□□□□□ -0.68
SSBP1-212ENST00000489378 SYDE2Q5VT97 1194 aa10.83□□□□□ -0.68
SSBP1-212ENST00000489378 ZSCAN25Q6NSZ9 544 aa10.83□□□□□ -0.68
SSBP1-212ENST00000489378 DGLUCYQ7Z3D6 616 aa10.83□□□□□ -0.68
SSBP1-212ENST00000489378 ITPRIPQ8IWB1 547 aa10.83□□□□□ -0.68
SSBP1-212ENST00000489378 DHX37Q8IY37 1157 aaKnown RBP10.83□□□□□ -0.68
SSBP1-212ENST00000489378 CLP1Q92989 425 aaKnown RBP10.83□□□□□ -0.68
SSBP1-212ENST00000489378 OSBP2Q969R2 916 aa10.83□□□□□ -0.68
SSBP1-212ENST00000489378 CNTNAP3BQ96NU0 1288 aa10.83□□□□□ -0.68
SSBP1-212ENST00000489378 KATNAL1Q9BW62 490 aa10.83□□□□□ -0.68
SSBP1-212ENST00000489378 CNTNAP3Q9BZ76 1288 aa10.83□□□□□ -0.68
SSBP1-212ENST00000489378 RC3H2Q9HBD1 1191 aaKnown RBP10.83□□□□□ -0.68
SSBP1-212ENST00000489378 STX8Q9UNK0 236 aa10.83□□□□□ -0.68
SSBP1-212ENST00000489378 PLAGL2Q9UPG8 496 aa10.83□□□□□ -0.68
SSBP1-212ENST00000489378 ADGRA3Q8IWK6 1321 aa10.82□□□□□ -0.68
SSBP1-212ENST00000489378 BAHCC1Q9P281 2608 aa10.82□□□□□ -0.68
SSBP1-212ENST00000489378 RLBP1P12271 317 aa10.82□□□□□ -0.68
SSBP1-212ENST00000489378 RBM10P98175 930 aaKnown RBP10.82□□□□□ -0.68
SSBP1-212ENST00000489378 HSP90AB4PQ58FF6 505 aa10.82□□□□□ -0.68
SSBP1-212ENST00000489378 BTNL9Q6UXG8 535 aa10.82□□□□□ -0.68
SSBP1-212ENST00000489378 RBM23Q86U06 439 aaKnown RBP10.82□□□□□ -0.68
SSBP1-212ENST00000489378 KIF1BPQ96EK5 621 aa10.82□□□□□ -0.68
SSBP1-212ENST00000489378 IL17RBQ9NRM6 502 aa10.82□□□□□ -0.68
SSBP1-212ENST00000489378 RWDD3Q9Y3V2 267 aa10.82□□□□□ -0.68
SSBP1-212ENST00000489378 PCDHGC5Q9Y5F6 944 aa10.82□□□□□ -0.68
SSBP1-212ENST00000489378 MAP1BP46821 2468 aaKnown RBP10.81□□□□□ -0.68
SSBP1-212ENST00000489378 CHD6Q8TD26 2715 aa10.81□□□□□ -0.68
SSBP1-212ENST00000489378 APPP05067 770 aa10.81□□□□□ -0.68
SSBP1-212ENST00000489378 ITGB1P05556 798 aa10.81□□□□□ -0.68
SSBP1-212ENST00000489378 ZBTB33Q86T24 672 aa10.81□□□□□ -0.68
SSBP1-212ENST00000489378 PPTC7Q8NI37 304 aa10.81□□□□□ -0.68
SSBP1-212ENST00000489378 SUSD6Q92537 303 aa10.81□□□□□ -0.68
SSBP1-212ENST00000489378 EMID1Q96A84 441 aaPredicted RBP10.81□□□□□ -0.68
SSBP1-212ENST00000489378 GPCPD1Q9NPB8 672 aa10.81□□□□□ -0.68
SSBP1-212ENST00000489378 DDX41Q9UJV9 622 aaKnown RBP10.81□□□□□ -0.68
SSBP1-212ENST00000489378 FRMPD2Q68DX3 1309 aaPredicted RBP10.81□□□□□ -0.68
SSBP1-212ENST00000489378 CFAP47Q6ZTR5 3102 aa10.8□□□□□ -0.68
SSBP1-212ENST00000489378 KIAA1671Q9BY89 1806 aa10.8□□□□□ -0.68
SSBP1-212ENST00000489378 CHD8Q9HCK8 2581 aa10.8□□□□□ -0.68
SSBP1-212ENST00000489378 B4DLN1 442 aa10.8□□□□□ -0.68
SSBP1-212ENST00000489378 GPAA1O43292 621 aa10.8□□□□□ -0.68
SSBP1-212ENST00000489378 ATF7P17544 494 aaPredicted RBP10.8□□□□□ -0.68
SSBP1-212ENST00000489378 SP100P23497 879 aaPredicted RBP10.8□□□□□ -0.68
SSBP1-212ENST00000489378 MRPL12P52815 198 aaKnown RBP10.8□□□□□ -0.68
SSBP1-212ENST00000489378 BTG3Q14201 252 aaPredicted RBP10.8□□□□□ -0.68
SSBP1-212ENST00000489378 MCTP2Q6DN12 878 aa10.8□□□□□ -0.68
SSBP1-212ENST00000489378 NUDT18Q6ZVK8 323 aa10.8□□□□□ -0.68
SSBP1-212ENST00000489378 IFNL3Q8IZI9 196 aa10.8□□□□□ -0.68
SSBP1-212ENST00000489378 KREMEN2Q8NCW0 462 aa10.8□□□□□ -0.68
SSBP1-212ENST00000489378 VN1R2Q8NFZ6 395 aa10.8□□□□□ -0.68
SSBP1-212ENST00000489378 SPPL3Q8TCT6 385 aa10.8□□□□□ -0.68
SSBP1-212ENST00000489378 DCAF4Q8WV16 495 aa10.8□□□□□ -0.68
SSBP1-212ENST00000489378 TBC1D5Q92609 795 aa10.8□□□□□ -0.68
SSBP1-212ENST00000489378 ATP6V0A1Q93050 837 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms