RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 FBXO16Q8IX29 292 aaPredicted RBP12.9□□□□□ -0.34
CMSS1-205ENST00000489081 GRAMD1CQ8IYS0 662 aa12.9□□□□□ -0.34
CMSS1-205ENST00000489081 MSL3Q8N5Y2 521 aaKnown RBP12.9□□□□□ -0.34
CMSS1-205ENST00000489081 CCDC34Q96HJ3 373 aa12.9□□□□□ -0.34
CMSS1-205ENST00000489081 MTRQ99707 1265 aa12.9□□□□□ -0.34
CMSS1-205ENST00000489081 HSD17B14Q9BPX1 270 aa12.9□□□□□ -0.34
CMSS1-205ENST00000489081 KATNBL1Q9H079 304 aa12.9□□□□□ -0.34
CMSS1-205ENST00000489081 NT5C3AQ9H0P0 336 aa12.9□□□□□ -0.34
CMSS1-205ENST00000489081 TUFT1Q9NNX1 390 aa12.9□□□□□ -0.34
CMSS1-205ENST00000489081 BLOC1S4Q9NUP1 217 aa12.9□□□□□ -0.34
CMSS1-205ENST00000489081 RGL1Q9NZL6 768 aa12.9□□□□□ -0.34
CMSS1-205ENST00000489081 TCEAL9Q9UHQ7 104 aa12.9□□□□□ -0.34
CMSS1-205ENST00000489081 HOOK1Q9UJC3 728 aaKnown RBP12.9□□□□□ -0.34
CMSS1-205ENST00000489081 SYNGAP1Q96PV0 1343 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 THSD7BQ9C0I4 1608 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 LRRC37A2A6NM11 1700 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 WDR64B1ANS9 1081 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 TRPA1O75762 1119 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 SLITRK3O94933 977 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 ARIH2O95376 493 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 SNAI1O95863 264 aaPredicted RBP12.89□□□□□ -0.35
CMSS1-205ENST00000489081 PRR29P0C7W0 189 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 MUTP22033 750 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 UBA1P22314 1058 aaKnown RBP12.89□□□□□ -0.35
CMSS1-205ENST00000489081 SFNP31947 248 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 RGS2P41220 211 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 PSMC4P43686 418 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 JAK3P52333 1124 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 SP3Q02447 781 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 PNOCQ13519 176 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 ZNF746Q6NUN9 644 aaPredicted RBP12.89□□□□□ -0.35
CMSS1-205ENST00000489081 CCDC62Q6P9F0 684 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 KCNV1Q6PIU1 500 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 LRSAM1Q6UWE0 723 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 KCNK18Q7Z418 384 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 GIMAP8Q8ND71 665 aaPredicted RBP12.89□□□□□ -0.35
CMSS1-205ENST00000489081 RDM1Q8NG50 284 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 NEK9Q8TD19 979 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 RAD54LQ92698 747 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 ERCC4Q92889 916 aaPredicted RBP12.89□□□□□ -0.35
CMSS1-205ENST00000489081 DYDC2Q96IM9 177 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 TRIM47Q96LD4 638 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 APBA2Q99767 749 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 TINF2Q9BSI4 451 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 FUCA2Q9BTY2 467 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 ARHGAP39Q9C0H5 1083 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 BCAS3Q9H6U6 928 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 MAGEF1Q9HAY2 307 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 JPH1Q9HDC5 661 aaPredicted RBP12.89□□□□□ -0.35
CMSS1-205ENST00000489081 VTA1Q9NP79 307 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 KBTBD4Q9NVX7 518 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 KIAA1468Q9P260 1216 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 SLC9A2Q9UBY0 812 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 KIAA1024Q9UPX6 916 aa12.89□□□□□ -0.35
CMSS1-205ENST00000489081 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.88□□□□□ -0.35
CMSS1-205ENST00000489081 RBM47A0AV96 593 aaKnown RBP12.88□□□□□ -0.35
CMSS1-205ENST00000489081 POTEFA5A3E0 1075 aa12.88□□□□□ -0.35
CMSS1-205ENST00000489081 P4HBP07237 508 aaKnown RBP12.88□□□□□ -0.35
CMSS1-205ENST00000489081 AFMP43652 599 aa12.88□□□□□ -0.35
CMSS1-205ENST00000489081 CYP4A11Q02928 519 aa12.88□□□□□ -0.35
CMSS1-205ENST00000489081 NEDD9Q14511 834 aa12.88□□□□□ -0.35
CMSS1-205ENST00000489081 TAPT1Q6NXT6 567 aa12.88□□□□□ -0.35
CMSS1-205ENST00000489081 POTEGQ6S5H5 508 aa12.88□□□□□ -0.35
CMSS1-205ENST00000489081 SMAP1Q8IYB5 467 aaPredicted RBP12.88□□□□□ -0.35
CMSS1-205ENST00000489081 KCTD17Q8N5Z5 321 aa12.88□□□□□ -0.35
CMSS1-205ENST00000489081 SCFD2Q8WU76 684 aa12.88□□□□□ -0.35
CMSS1-205ENST00000489081 LARP4BQ92615 738 aaKnown RBP12.88□□□□□ -0.35
CMSS1-205ENST00000489081 STAMQ92783 540 aa12.88□□□□□ -0.35
CMSS1-205ENST00000489081 PDGFCQ9NRA1 345 aa12.88□□□□□ -0.35
CMSS1-205ENST00000489081 TUBE1Q9UJT0 475 aa12.88□□□□□ -0.35
CMSS1-205ENST00000489081 DDX41Q9UJV9 622 aaKnown RBP12.88□□□□□ -0.35
CMSS1-205ENST00000489081 PCDHA5Q9Y5H7 936 aa12.88□□□□□ -0.35
CMSS1-205ENST00000489081 GTPBP6O43824 516 aaPredicted RBP12.87□□□□□ -0.35
CMSS1-205ENST00000489081 FARP2O94887 1054 aaPredicted RBP12.87□□□□□ -0.35
CMSS1-205ENST00000489081 IGHA2P01877 340 aa12.87□□□□□ -0.35
CMSS1-205ENST00000489081 CYP2B6P20813 491 aa12.87□□□□□ -0.35
CMSS1-205ENST00000489081 SARSP49591 514 aaKnown RBP12.87□□□□□ -0.35
CMSS1-205ENST00000489081 ACTR2P61160 394 aa12.87□□□□□ -0.35
CMSS1-205ENST00000489081 CAP1Q01518 475 aa12.87□□□□□ -0.35
CMSS1-205ENST00000489081 DPYDQ12882 1025 aa12.87□□□□□ -0.35
CMSS1-205ENST00000489081 CTTNQ14247 550 aaKnown RBP12.87□□□□□ -0.35
CMSS1-205ENST00000489081 MCM6Q14566 821 aa12.87□□□□□ -0.35
CMSS1-205ENST00000489081 TTLL4Q14679 1199 aa12.87□□□□□ -0.35
CMSS1-205ENST00000489081 CCL14Q16627 93 aa12.87□□□□□ -0.35
CMSS1-205ENST00000489081 LY6KQ17RY6 165 aa12.87□□□□□ -0.35
CMSS1-205ENST00000489081 OLFML2BQ68BL8 750 aa12.87□□□□□ -0.35
CMSS1-205ENST00000489081 METTL7BQ6UX53 244 aa12.87□□□□□ -0.35
CMSS1-205ENST00000489081 CYFIP1Q7L576 1253 aa12.87□□□□□ -0.35
CMSS1-205ENST00000489081 TPH2Q8IWU9 490 aa12.87□□□□□ -0.35
CMSS1-205ENST00000489081 SPATA20Q8TB22 786 aa12.87□□□□□ -0.35
CMSS1-205ENST00000489081 ABHD16BQ9H3Z7 469 aa12.87□□□□□ -0.35
CMSS1-205ENST00000489081 FLRT1Q9NZU1 646 aa12.87□□□□□ -0.35
CMSS1-205ENST00000489081 WRAP73Q9P2S5 460 aaPredicted RBP12.87□□□□□ -0.35
CMSS1-205ENST00000489081 DNM3Q9UQ16 869 aa12.87□□□□□ -0.35
CMSS1-205ENST00000489081 TELO2Q9Y4R8 837 aa12.87□□□□□ -0.35
CMSS1-205ENST00000489081 SAMM50Q9Y512 469 aa12.87□□□□□ -0.35
CMSS1-205ENST00000489081 PCDHA10Q9Y5I2 948 aa12.87□□□□□ -0.35
CMSS1-205ENST00000489081 ZNFX1Q9P2E3 1918 aaKnown RBP12.87□□□□□ -0.35
CMSS1-205ENST00000489081 E9PMD0 336 aa12.86□□□□□ -0.35
CMSS1-205ENST00000489081 GPR25O00155 361 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms