RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 COQ6Q9Y2Z9 468 aa5.59□□□□□ -1.51
RFC4-213ENST00000489028 TCRBV16S1A1N1A0A5B0 115 aa5.58□□□□□ -1.52
RFC4-213ENST00000489028 ZNF561-AS1K7EIQ3 104 aa5.58□□□□□ -1.52
RFC4-213ENST00000489028 PPP1R12AO14974 1030 aaPredicted RBP5.58□□□□□ -1.52
RFC4-213ENST00000489028 EFCAB14O75071 495 aa5.58□□□□□ -1.52
RFC4-213ENST00000489028 FAHP16930 419 aa5.58□□□□□ -1.52
RFC4-213ENST00000489028 KRT15P19012 456 aa5.58□□□□□ -1.52
RFC4-213ENST00000489028 RPL13P26373 211 aaKnown RBP5.58□□□□□ -1.52
RFC4-213ENST00000489028 SARSP49591 514 aaKnown RBP5.58□□□□□ -1.52
RFC4-213ENST00000489028 DNM2P50570 870 aa5.58□□□□□ -1.52
RFC4-213ENST00000489028 GPR19Q15760 415 aa5.58□□□□□ -1.52
RFC4-213ENST00000489028 ZC3H7AQ8IWR0 971 aaKnown RBP5.58□□□□□ -1.52
RFC4-213ENST00000489028 SP8Q8IXZ3 490 aa5.58□□□□□ -1.52
RFC4-213ENST00000489028 ZDHHC14Q8IZN3 488 aa5.58□□□□□ -1.52
RFC4-213ENST00000489028 CISD2Q8N5K1 135 aaKnown RBP5.58□□□□□ -1.52
RFC4-213ENST00000489028 TTLL6Q8N841 843 aa5.58□□□□□ -1.52
RFC4-213ENST00000489028 RNPC3Q96LT9 517 aaKnown RBP5.58□□□□□ -1.52
RFC4-213ENST00000489028 CCDC163A0A0D9SF12 145 aa5.57□□□□□ -1.52
RFC4-213ENST00000489028 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.57□□□□□ -1.52
RFC4-213ENST00000489028 ESYT3A0FGR9 886 aa5.57□□□□□ -1.52
RFC4-213ENST00000489028 FAM90A27PA6NNH2 459 aa5.57□□□□□ -1.52
RFC4-213ENST00000489028 SMARCA5O60264 1052 aaPredicted RBP5.57□□□□□ -1.52
RFC4-213ENST00000489028 KCNC1P48547 511 aa5.57□□□□□ -1.52
RFC4-213ENST00000489028 MLLT6P55198 1093 aaPredicted RBP5.57□□□□□ -1.52
RFC4-213ENST00000489028 CD276Q5ZPR3 534 aa5.57□□□□□ -1.52
RFC4-213ENST00000489028 ZNF761Q86XN6 746 aaPredicted RBP5.57□□□□□ -1.52
RFC4-213ENST00000489028 MAGEB10Q96LZ2 347 aaPredicted RBP5.57□□□□□ -1.52
RFC4-213ENST00000489028 ADAM7Q9H2U9 754 aa5.57□□□□□ -1.52
RFC4-213ENST00000489028 TMEM260Q9NX78 707 aa5.57□□□□□ -1.52
RFC4-213ENST00000489028 DDX3XO00571 662 aaKnown RBP eCLIP5.56□□□□□ -1.52
RFC4-213ENST00000489028 PLD2O14939 933 aa5.56□□□□□ -1.52
RFC4-213ENST00000489028 NOBOXO60393 691 aa5.56□□□□□ -1.52
RFC4-213ENST00000489028 SASH1O94885 1247 aa5.56□□□□□ -1.52
RFC4-213ENST00000489028 ZNF28P17035 718 aa5.56□□□□□ -1.52
RFC4-213ENST00000489028 NAT1P18440 290 aa5.56□□□□□ -1.52
RFC4-213ENST00000489028 SEC23AQ15436 765 aa5.56□□□□□ -1.52
RFC4-213ENST00000489028 TM4SF20Q53R12 229 aa5.56□□□□□ -1.52
RFC4-213ENST00000489028 NT5DC1Q5TFE4 455 aa5.56□□□□□ -1.52
RFC4-213ENST00000489028 TTLL7Q6ZT98 887 aa5.56□□□□□ -1.52
RFC4-213ENST00000489028 DTX3Q8N9I9 347 aa5.56□□□□□ -1.52
RFC4-213ENST00000489028 ADAMTS17Q8TE56 1095 aa5.56□□□□□ -1.52
RFC4-213ENST00000489028 ZCCHC14Q8WYQ9 949 aaKnown RBP5.56□□□□□ -1.52
RFC4-213ENST00000489028 RAPGEFL1Q9UHV5 662 aa5.56□□□□□ -1.52
RFC4-213ENST00000489028 DNAJC8O75937 253 aaPredicted RBP5.55□□□□□ -1.52
RFC4-213ENST00000489028 COL6A1P12109 1028 aa5.55□□□□□ -1.52
RFC4-213ENST00000489028 PTPN1P18031 435 aaKnown RBP5.55□□□□□ -1.52
RFC4-213ENST00000489028 ST5P78524 1137 aa5.55□□□□□ -1.52
RFC4-213ENST00000489028 LACTBP83111 547 aaPredicted RBP5.55□□□□□ -1.52
RFC4-213ENST00000489028 CRY1Q16526 586 aa5.55□□□□□ -1.52
RFC4-213ENST00000489028 FAM47CQ5HY64 1035 aa5.55□□□□□ -1.52
RFC4-213ENST00000489028 FIGNQ5HY92 759 aa5.55□□□□□ -1.52
RFC4-213ENST00000489028 BTBD8Q5XKL5 378 aa5.55□□□□□ -1.52
RFC4-213ENST00000489028 VASNQ6EMK4 673 aa5.55□□□□□ -1.52
RFC4-213ENST00000489028 OVCH1Q7RTY7 1134 aa5.55□□□□□ -1.52
RFC4-213ENST00000489028 JAZF1Q86VZ6 243 aa5.55□□□□□ -1.52
RFC4-213ENST00000489028 CLIC6Q96NY7 704 aa5.55□□□□□ -1.52
RFC4-213ENST00000489028 TMEM209Q96SK2 561 aa5.55□□□□□ -1.52
RFC4-213ENST00000489028 CELF4Q9BZC1 486 aaKnown RBP5.55□□□□□ -1.52
RFC4-213ENST00000489028 CROTQ9UKG9 612 aa5.55□□□□□ -1.52
RFC4-213ENST00000489028 NUB1Q9Y5A7 615 aa5.55□□□□□ -1.52
RFC4-213ENST00000489028 DUSP10Q9Y6W6 482 aa5.55□□□□□ -1.52
RFC4-213ENST00000489028 ZNF839A8K0R7 811 aa5.54□□□□□ -1.52
RFC4-213ENST00000489028 ASMTLO95671 621 aa5.54□□□□□ -1.52
RFC4-213ENST00000489028 C4BPAP04003 597 aaKnown RBP5.54□□□□□ -1.52
RFC4-213ENST00000489028 SDSP20132 328 aa5.54□□□□□ -1.52
RFC4-213ENST00000489028 PFKPQ01813 784 aa5.54□□□□□ -1.52
RFC4-213ENST00000489028 ZNF460Q14592 562 aa5.54□□□□□ -1.52
RFC4-213ENST00000489028 SKIDA1Q1XH10 827 aa5.54□□□□□ -1.52
RFC4-213ENST00000489028 TKFCQ3LXA3 575 aa5.54□□□□□ -1.52
RFC4-213ENST00000489028 FNDC3BQ53EP0 1204 aaKnown RBP5.54□□□□□ -1.52
RFC4-213ENST00000489028 CPZQ66K79 652 aa5.54□□□□□ -1.52
RFC4-213ENST00000489028 MCTP2Q6DN12 878 aa5.54□□□□□ -1.52
RFC4-213ENST00000489028 LILRA6Q6PI73 481 aa5.54□□□□□ -1.52
RFC4-213ENST00000489028 HHIPL2Q6UWX4 724 aa5.54□□□□□ -1.52
RFC4-213ENST00000489028 NOSTRINQ8IVI9 506 aa5.54□□□□□ -1.52
RFC4-213ENST00000489028 IGSF22Q8N9C0 903 aa5.54□□□□□ -1.52
RFC4-213ENST00000489028 TXNDC5Q8NBS9 432 aaKnown RBP5.54□□□□□ -1.52
RFC4-213ENST00000489028 SLC39A2Q9NP94 309 aa5.54□□□□□ -1.52
RFC4-213ENST00000489028 RIC8BQ9NVN3 520 aa5.54□□□□□ -1.52
RFC4-213ENST00000489028 RTEL1Q9NZ71 1219 aa5.54□□□□□ -1.52
RFC4-213ENST00000489028 ATP23Q9Y6H3 246 aa5.54□□□□□ -1.52
RFC4-213ENST00000489028 PRICKLE3O43900 615 aaPredicted RBP5.53□□□□□ -1.52
RFC4-213ENST00000489028 IL18BPO95998 194 aa5.53□□□□□ -1.52
RFC4-213ENST00000489028 IL13P35225 146 aa5.53□□□□□ -1.52
RFC4-213ENST00000489028 GLRBP48167 497 aa5.53□□□□□ -1.52
RFC4-213ENST00000489028 CTSWP56202 376 aa5.53□□□□□ -1.52
RFC4-213ENST00000489028 DBPQ10586 325 aaPredicted RBP5.53□□□□□ -1.52
RFC4-213ENST00000489028 RGL3Q3MIN7 710 aa5.53□□□□□ -1.52
RFC4-213ENST00000489028 TMEM177Q53S58 311 aa5.53□□□□□ -1.52
RFC4-213ENST00000489028 LCE1DQ5T752 114 aa5.53□□□□□ -1.52
RFC4-213ENST00000489028 PRAMEF18Q5VWM3 479 aa5.53□□□□□ -1.52
RFC4-213ENST00000489028 NLGN4XQ8N0W4 816 aa5.53□□□□□ -1.52
RFC4-213ENST00000489028 DDX1Q92499 740 aaKnown RBP5.53□□□□□ -1.52
RFC4-213ENST00000489028 YTHDC1Q96MU7 727 aaKnown RBP5.53□□□□□ -1.52
RFC4-213ENST00000489028 DLL4Q9NR61 685 aa5.53□□□□□ -1.52
RFC4-213ENST00000489028 ZFP69BQ9UJL9 534 aa5.53□□□□□ -1.52
RFC4-213ENST00000489028 TNPO3Q9Y5L0 923 aaKnown RBP5.53□□□□□ -1.52
RFC4-213ENST00000489028 MRPL42Q9Y6G3 142 aaKnown RBP5.53□□□□□ -1.52
RFC4-213ENST00000489028 GSTA4O15217 222 aa5.52□□□□□ -1.53
RFC4-213ENST00000489028 CLASP2O75122 1294 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms