RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 MTMR1Q13613 665 aa22.53■■□□□ 1.2
NECAB3-213ENST00000488489 MOGSQ13724 837 aa22.53■■□□□ 1.2
NECAB3-213ENST00000488489 TPD52L1Q16890 204 aaPredicted RBP22.53■■□□□ 1.2
NECAB3-213ENST00000488489 ARMC9Q7Z3E5 817 aa22.53■■□□□ 1.2
NECAB3-213ENST00000488489 TEKT3Q9BXF9 490 aa22.53■■□□□ 1.2
NECAB3-213ENST00000488489 RAD51AP2Q09MP3 1159 aa22.52■■□□□ 1.2
NECAB3-213ENST00000488489 TTI2Q6NXR4 508 aa22.52■■□□□ 1.2
NECAB3-213ENST00000488489 SYT2Q8N9I0 419 aaPredicted RBP22.52■■□□□ 1.2
NECAB3-213ENST00000488489 GLIS3Q8NEA6 775 aa22.52■■□□□ 1.2
NECAB3-213ENST00000488489 DHTKD1Q96HY7 919 aaPredicted RBP22.52■■□□□ 1.2
NECAB3-213ENST00000488489 DDX39AO00148 427 aaKnown RBP22.52■■□□□ 1.2
NECAB3-213ENST00000488489 GJA5P36382 358 aa22.52■■□□□ 1.2
NECAB3-213ENST00000488489 COBLL1Q53SF7 1204 aa22.52■■□□□ 1.2
NECAB3-213ENST00000488489 VSIG10LQ86VR7 867 aa22.52■■□□□ 1.2
NECAB3-213ENST00000488489 IRF2BP1Q8IU81 584 aa22.52■■□□□ 1.2
NECAB3-213ENST00000488489 TPH2Q8IWU9 490 aa22.52■■□□□ 1.2
NECAB3-213ENST00000488489 TUFT1Q9NNX1 390 aa22.52■■□□□ 1.2
NECAB3-213ENST00000488489 BMP2KQ9NSY1 1161 aaPredicted RBP22.52■■□□□ 1.2
NECAB3-213ENST00000488489 WRAP73Q9P2S5 460 aaPredicted RBP22.52■■□□□ 1.2
NECAB3-213ENST00000488489 ZBTB39O15060 712 aa22.51■■□□□ 1.19
NECAB3-213ENST00000488489 NR3C2P08235 984 aa22.51■■□□□ 1.19
NECAB3-213ENST00000488489 COASYQ13057 564 aa22.51■■□□□ 1.19
NECAB3-213ENST00000488489 NR1I3Q14994 352 aa22.51■■□□□ 1.19
NECAB3-213ENST00000488489 VSTM4Q8IW00 320 aa22.51■■□□□ 1.19
NECAB3-213ENST00000488489 LRRC8AQ8IWT6 810 aa22.51■■□□□ 1.19
NECAB3-213ENST00000488489 PIGOQ8TEQ8 1089 aa22.51■■□□□ 1.19
NECAB3-213ENST00000488489 ASCC2Q9H1I8 757 aaPredicted RBP22.51■■□□□ 1.19
NECAB3-213ENST00000488489 PANK4Q9NVE7 773 aa22.51■■□□□ 1.19
NECAB3-213ENST00000488489 IMPACTQ9P2X3 320 aa22.51■■□□□ 1.19
NECAB3-213ENST00000488489 A0A0G2JMZ2 1700 aa22.51■■□□□ 1.19
NECAB3-213ENST00000488489 A0A1B0GTH6 734 aa22.51■■□□□ 1.19
NECAB3-213ENST00000488489 RIOK3O14730 519 aaKnown RBP22.51■■□□□ 1.19
NECAB3-213ENST00000488489 ATP9AO75110 1047 aa22.51■■□□□ 1.19
NECAB3-213ENST00000488489 P2RX5Q93086 422 aa22.51■■□□□ 1.19
NECAB3-213ENST00000488489 DUSP9Q99956 384 aaKnown RBP22.51■■□□□ 1.19
NECAB3-213ENST00000488489 GTPBP4Q9BZE4 634 aaKnown RBP22.51■■□□□ 1.19
NECAB3-213ENST00000488489 BHMT2Q9H2M3 363 aa22.51■■□□□ 1.19
NECAB3-213ENST00000488489 ZNF408Q9H9D4 720 aa22.51■■□□□ 1.19
NECAB3-213ENST00000488489 CCNE1P24864 410 aa22.5■■□□□ 1.19
NECAB3-213ENST00000488489 EPHA7Q15375 998 aa22.5■■□□□ 1.19
NECAB3-213ENST00000488489 ANKRD40Q6AI12 368 aa22.5■■□□□ 1.19
NECAB3-213ENST00000488489 AGTPBP1Q9UPW5 1226 aa22.5■■□□□ 1.19
NECAB3-213ENST00000488489 LCTP09848 1927 aa22.5■■□□□ 1.19
NECAB3-213ENST00000488489 TESPA1A2RU30 521 aaPredicted RBP22.49■■□□□ 1.19
NECAB3-213ENST00000488489 IRX3P78415 501 aaPredicted RBP22.49■■□□□ 1.19
NECAB3-213ENST00000488489 NSUN6Q8TEA1 469 aaKnown RBP22.49■■□□□ 1.19
NECAB3-213ENST00000488489 FGFBP2Q9BYJ0 223 aa22.49■■□□□ 1.19
NECAB3-213ENST00000488489 SEMA6BQ9H3T3 888 aa22.49■■□□□ 1.19
NECAB3-213ENST00000488489 ADD3Q9UEY8 706 aaKnown RBP22.49■■□□□ 1.19
NECAB3-213ENST00000488489 PCDHA2Q9Y5H9 948 aa22.49■■□□□ 1.19
NECAB3-213ENST00000488489 TEX33O43247 280 aa22.49■■□□□ 1.19
NECAB3-213ENST00000488489 EYA4O95677 639 aa22.49■■□□□ 1.19
NECAB3-213ENST00000488489 HERVK_113P62684 666 aa22.49■■□□□ 1.19
NECAB3-213ENST00000488489 PSMD2Q13200 908 aa22.49■■□□□ 1.19
NECAB3-213ENST00000488489 GIT2Q14161 759 aa22.49■■□□□ 1.19
NECAB3-213ENST00000488489 LRRC41Q15345 812 aa22.49■■□□□ 1.19
NECAB3-213ENST00000488489 MB21D1Q8N884 522 aa22.49■■□□□ 1.19
NECAB3-213ENST00000488489 CHST13Q8NET6 341 aa22.49■■□□□ 1.19
NECAB3-213ENST00000488489 EEF2KMTQ96G04 330 aa22.49■■□□□ 1.19
NECAB3-213ENST00000488489 FRMD3A2A2Y4 597 aa22.48■■□□□ 1.19
NECAB3-213ENST00000488489 LRRC10BA6NIK2 292 aa22.48■■□□□ 1.19
NECAB3-213ENST00000488489 RGS20O76081 388 aa22.48■■□□□ 1.19
NECAB3-213ENST00000488489 KRT31Q15323 416 aa22.48■■□□□ 1.19
NECAB3-213ENST00000488489 TCP11X2Q5H9J9 407 aa22.48■■□□□ 1.19
NECAB3-213ENST00000488489 TRIM47Q96LD4 638 aa22.48■■□□□ 1.19
NECAB3-213ENST00000488489 RUSC1Q9BVN2 902 aa22.48■■□□□ 1.19
NECAB3-213ENST00000488489 SRRTQ9BXP5 876 aaKnown RBP22.48■■□□□ 1.19
NECAB3-213ENST00000488489 SPATC1LQ9H0A9 340 aa22.48■■□□□ 1.19
NECAB3-213ENST00000488489 R3HDMLQ9H3Y0 253 aa22.48■■□□□ 1.19
NECAB3-213ENST00000488489 TBC1D7Q9P0N9 293 aa22.48■■□□□ 1.19
NECAB3-213ENST00000488489 LIMA1Q9UHB6 759 aaKnown RBP22.48■■□□□ 1.19
NECAB3-213ENST00000488489 CNMDO75829 334 aa22.48■■□□□ 1.19
NECAB3-213ENST00000488489 CCND2P30279 289 aa22.48■■□□□ 1.19
NECAB3-213ENST00000488489 CENPPQ6IPU0 288 aa22.48■■□□□ 1.19
NECAB3-213ENST00000488489 GPAT2Q6NUI2 795 aa22.48■■□□□ 1.19
NECAB3-213ENST00000488489 ARMCX5Q6P1M9 558 aa22.48■■□□□ 1.19
NECAB3-213ENST00000488489 XRRA1Q6P2D8 792 aa22.48■■□□□ 1.19
NECAB3-213ENST00000488489 RIOX2Q8IUF8 465 aa22.48■■□□□ 1.19
NECAB3-213ENST00000488489 SMAP1Q8IYB5 467 aaPredicted RBP22.48■■□□□ 1.19
NECAB3-213ENST00000488489 GUF1Q8N442 669 aaKnown RBP22.48■■□□□ 1.19
NECAB3-213ENST00000488489 KCTD17Q8N5Z5 321 aa22.48■■□□□ 1.19
NECAB3-213ENST00000488489 BANK1Q8NDB2 785 aa22.48■■□□□ 1.19
NECAB3-213ENST00000488489 ARID3AQ99856 593 aa22.48■■□□□ 1.19
NECAB3-213ENST00000488489 ASTN1O14525 1302 aa22.47■■□□□ 1.19
NECAB3-213ENST00000488489 KCNJ18B7U540 433 aa22.47■■□□□ 1.19
NECAB3-213ENST00000488489 CTIFO43310 598 aaKnown RBP22.47■■□□□ 1.19
NECAB3-213ENST00000488489 KRT18P05783 430 aaKnown RBP22.47■■□□□ 1.19
NECAB3-213ENST00000488489 PPP1R2P41236 205 aa22.47■■□□□ 1.19
NECAB3-213ENST00000488489 KCNJ12Q14500 433 aa22.47■■□□□ 1.19
NECAB3-213ENST00000488489 FAM26FQ5R3K3 315 aa22.47■■□□□ 1.19
NECAB3-213ENST00000488489 CCDC65Q8IXS2 484 aa22.47■■□□□ 1.19
NECAB3-213ENST00000488489 PKNOX2Q96KN3 472 aa22.47■■□□□ 1.19
NECAB3-213ENST00000488489 REEP2Q9BRK0 252 aa22.47■■□□□ 1.19
NECAB3-213ENST00000488489 LXNQ9BS40 222 aa22.47■■□□□ 1.19
NECAB3-213ENST00000488489 PAGR1Q9BTK6 254 aa22.47■■□□□ 1.19
NECAB3-213ENST00000488489 RRAGCQ9HB90 399 aa22.47■■□□□ 1.19
NECAB3-213ENST00000488489 CNTN2Q02246 1040 aa22.46■■□□□ 1.19
NECAB3-213ENST00000488489 HERC4Q5GLZ8 1057 aaPredicted RBP22.46■■□□□ 1.19
NECAB3-213ENST00000488489 MIER3Q7Z3K6 550 aa22.46■■□□□ 1.19
NECAB3-213ENST00000488489 CSGALNACT2Q8N6G5 542 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms