RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 TMEM60Q9H2L4 133 aa12.5□□□□□ -0.41
UBE4B-210ENST00000488228 SIP14410 1827 aa12.5□□□□□ -0.41
UBE4B-210ENST00000488228 GRIN2DO15399 1336 aa12.49□□□□□ -0.41
UBE4B-210ENST00000488228 GSTTP1A0A1W2PQM5 241 aa12.49□□□□□ -0.41
UBE4B-210ENST00000488228 PSMD10O75832 226 aa12.49□□□□□ -0.41
UBE4B-210ENST00000488228 F2P00734 622 aa12.49□□□□□ -0.41
UBE4B-210ENST00000488228 TRAPPC10P48553 1259 aa12.49□□□□□ -0.41
UBE4B-210ENST00000488228 CALCRLQ16602 461 aa12.49□□□□□ -0.41
UBE4B-210ENST00000488228 TRIM60Q495X7 471 aa12.49□□□□□ -0.41
UBE4B-210ENST00000488228 FAM173BQ6P4H8 233 aa12.49□□□□□ -0.41
UBE4B-210ENST00000488228 HAS1Q92839 578 aa12.49□□□□□ -0.41
UBE4B-210ENST00000488228 VTI1AQ96AJ9 217 aa12.49□□□□□ -0.41
UBE4B-210ENST00000488228 TEKT3Q9BXF9 490 aa12.49□□□□□ -0.41
UBE4B-210ENST00000488228 UNC45AQ9H3U1 944 aa12.49□□□□□ -0.41
UBE4B-210ENST00000488228 TBC1D22BQ9NU19 505 aa12.49□□□□□ -0.41
UBE4B-210ENST00000488228 PCDH10Q9P2E7 1040 aa12.49□□□□□ -0.41
UBE4B-210ENST00000488228 TCEAL9Q9UHQ7 104 aa12.49□□□□□ -0.41
UBE4B-210ENST00000488228 VAV3Q9UKW4 847 aa12.49□□□□□ -0.41
UBE4B-210ENST00000488228 PCDHB6Q9Y5E3 794 aa12.49□□□□□ -0.41
UBE4B-210ENST00000488228 LOXHD1Q8IVV2 1947 aa12.49□□□□□ -0.41
UBE4B-210ENST00000488228 EMSYQ7Z589 1322 aa12.48□□□□□ -0.41
UBE4B-210ENST00000488228 A0A0U1RQG5 324 aaPredicted RBP12.48□□□□□ -0.41
UBE4B-210ENST00000488228 MARK3P27448 753 aa12.48□□□□□ -0.41
UBE4B-210ENST00000488228 ANP32AP39687 249 aaKnown RBP12.48□□□□□ -0.41
UBE4B-210ENST00000488228 PSEN2P49810 448 aa12.48□□□□□ -0.41
UBE4B-210ENST00000488228 RTP1P59025 263 aa12.48□□□□□ -0.41
UBE4B-210ENST00000488228 KRT76Q01546 638 aa12.48□□□□□ -0.41
UBE4B-210ENST00000488228 MFSD10Q14728 455 aa12.48□□□□□ -0.41
UBE4B-210ENST00000488228 SNX17Q15036 470 aa12.48□□□□□ -0.41
UBE4B-210ENST00000488228 FAM47CQ5HY64 1035 aa12.48□□□□□ -0.41
UBE4B-210ENST00000488228 BRAPQ7Z569 592 aa12.48□□□□□ -0.41
UBE4B-210ENST00000488228 CCDC60Q8IWA6 550 aaPredicted RBP12.48□□□□□ -0.41
UBE4B-210ENST00000488228 PCYT2Q99447 389 aa12.48□□□□□ -0.41
UBE4B-210ENST00000488228 RIT2Q99578 217 aa12.48□□□□□ -0.41
UBE4B-210ENST00000488228 C16orf70Q9BSU1 422 aa12.48□□□□□ -0.41
UBE4B-210ENST00000488228 FTOQ9C0B1 505 aaKnown RBP eCLIP12.48□□□□□ -0.41
UBE4B-210ENST00000488228 ATP11BQ9Y2G3 1177 aa12.48□□□□□ -0.41
UBE4B-210ENST00000488228 EVPLQ92817 2033 aa12.48□□□□□ -0.41
UBE4B-210ENST00000488228 SCN5AQ14524 2016 aa12.47□□□□□ -0.41
UBE4B-210ENST00000488228 IGSF9BQ9UPX0 1349 aa12.47□□□□□ -0.41
UBE4B-210ENST00000488228 WDR64B1ANS9 1081 aa12.47□□□□□ -0.41
UBE4B-210ENST00000488228 TBX3O15119 743 aa12.47□□□□□ -0.41
UBE4B-210ENST00000488228 MARCH6O60337 910 aa12.47□□□□□ -0.41
UBE4B-210ENST00000488228 KPNA6O60684 536 aa12.47□□□□□ -0.41
UBE4B-210ENST00000488228 PQBP1O60828 265 aaKnown RBP12.47□□□□□ -0.41
UBE4B-210ENST00000488228 PPFIA4O75335 1185 aa12.47□□□□□ -0.41
UBE4B-210ENST00000488228 CABYRO75952 493 aa12.47□□□□□ -0.41
UBE4B-210ENST00000488228 OR52Z1P0C646 297 aa12.47□□□□□ -0.41
UBE4B-210ENST00000488228 SUPT20HL2P0C7V6 817 aa12.47□□□□□ -0.41
UBE4B-210ENST00000488228 RGS19P49795 217 aa12.47□□□□□ -0.41
UBE4B-210ENST00000488228 ITGA7Q13683 1181 aa12.47□□□□□ -0.41
UBE4B-210ENST00000488228 KIAA0753Q2KHM9 967 aa12.47□□□□□ -0.41
UBE4B-210ENST00000488228 NBPF20Q3BBV1 942 aa12.47□□□□□ -0.41
UBE4B-210ENST00000488228 RILPL1Q5EBL4 403 aa12.47□□□□□ -0.41
UBE4B-210ENST00000488228 ZNF746Q6NUN9 644 aaPredicted RBP12.47□□□□□ -0.41
UBE4B-210ENST00000488228 SLC39A5Q6ZMH5 540 aa12.47□□□□□ -0.41
UBE4B-210ENST00000488228 C7orf61Q8IZ16 206 aa12.47□□□□□ -0.41
UBE4B-210ENST00000488228 SEPT1Q8WYJ6 367 aa12.47□□□□□ -0.41
UBE4B-210ENST00000488228 MTMR9Q96QG7 549 aa12.47□□□□□ -0.41
UBE4B-210ENST00000488228 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.47□□□□□ -0.41
UBE4B-210ENST00000488228 SAMM50Q9Y512 469 aa12.47□□□□□ -0.41
UBE4B-210ENST00000488228 POTEMA6NI47 508 aa12.46□□□□□ -0.41
UBE4B-210ENST00000488228 HAS3O00219 553 aa12.46□□□□□ -0.41
UBE4B-210ENST00000488228 EML1O00423 815 aa12.46□□□□□ -0.41
UBE4B-210ENST00000488228 BACH1O14867 736 aa12.46□□□□□ -0.41
UBE4B-210ENST00000488228 LGR5O75473 907 aa12.46□□□□□ -0.41
UBE4B-210ENST00000488228 ZSCAN22P10073 491 aaPredicted RBP12.46□□□□□ -0.41
UBE4B-210ENST00000488228 TXKP42681 527 aa12.46□□□□□ -0.41
UBE4B-210ENST00000488228 SPIRE1Q08AE8 756 aa12.46□□□□□ -0.41
UBE4B-210ENST00000488228 PPP2R5CQ13362 524 aa12.46□□□□□ -0.41
UBE4B-210ENST00000488228 ORC2Q13416 577 aaPredicted RBP12.46□□□□□ -0.41
UBE4B-210ENST00000488228 UGCGQ16739 394 aa12.46□□□□□ -0.41
UBE4B-210ENST00000488228 NCAPH2Q6IBW4 605 aa12.46□□□□□ -0.41
UBE4B-210ENST00000488228 MIS18BP1Q6P0N0 1132 aa12.46□□□□□ -0.41
UBE4B-210ENST00000488228 B3GNT9Q6UX72 402 aa12.46□□□□□ -0.41
UBE4B-210ENST00000488228 ABHD15Q6UXT9 468 aa12.46□□□□□ -0.41
UBE4B-210ENST00000488228 MIER3Q7Z3K6 550 aa12.46□□□□□ -0.41
UBE4B-210ENST00000488228 SMAP1Q8IYB5 467 aaPredicted RBP12.46□□□□□ -0.41
UBE4B-210ENST00000488228 SLFN12Q8IYM2 578 aa12.46□□□□□ -0.41
UBE4B-210ENST00000488228 GLG1Q92896 1179 aa12.46□□□□□ -0.41
UBE4B-210ENST00000488228 FAM20AQ96MK3 541 aa12.46□□□□□ -0.41
UBE4B-210ENST00000488228 HTATIP2Q9BUP3 242 aa12.46□□□□□ -0.41
UBE4B-210ENST00000488228 TSHZ2Q9NRE2 1034 aa12.46□□□□□ -0.41
UBE4B-210ENST00000488228 DISC1Q9NRI5 854 aa12.46□□□□□ -0.41
UBE4B-210ENST00000488228 ZNF215Q9UL58 517 aaPredicted RBP12.46□□□□□ -0.41
UBE4B-210ENST00000488228 H3BRB1 525 aa12.45□□□□□ -0.42
UBE4B-210ENST00000488228 ARVCFO00192 962 aa12.45□□□□□ -0.42
UBE4B-210ENST00000488228 ATG7O95352 703 aa12.45□□□□□ -0.42
UBE4B-210ENST00000488228 BAG4O95429 457 aaKnown RBP12.45□□□□□ -0.42
UBE4B-210ENST00000488228 F13A1P00488 732 aa12.45□□□□□ -0.42
UBE4B-210ENST00000488228 PSAPP07602 524 aa12.45□□□□□ -0.42
UBE4B-210ENST00000488228 SMIM10L2AP0DMW4 78 aa12.45□□□□□ -0.42
UBE4B-210ENST00000488228 SMIM10L2BP0DMW5 78 aa12.45□□□□□ -0.42
UBE4B-210ENST00000488228 JAK3P52333 1124 aa12.45□□□□□ -0.42
UBE4B-210ENST00000488228 TLE2Q04725 743 aa12.45□□□□□ -0.42
UBE4B-210ENST00000488228 PTGDRQ13258 359 aa12.45□□□□□ -0.42
UBE4B-210ENST00000488228 FAM126BQ8IXS8 530 aa12.45□□□□□ -0.42
UBE4B-210ENST00000488228 C4orf32Q8N8J7 132 aa12.45□□□□□ -0.42
UBE4B-210ENST00000488228 SLC43A3Q8NBI5 491 aa12.45□□□□□ -0.42
UBE4B-210ENST00000488228 KATNAL1Q9BW62 490 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms