RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 ZSCAN16Q9H4T2 348 aaPredicted RBP17.77■□□□□ 0.44
C9orf3-219ENST00000488186 MTMR6Q9Y217 621 aa17.77■□□□□ 0.44
C9orf3-219ENST00000488186 A0A0U1RQG5 324 aaPredicted RBP17.76■□□□□ 0.43
C9orf3-219ENST00000488186 BACH1O14867 736 aa17.76■□□□□ 0.43
C9orf3-219ENST00000488186 DHX15O43143 795 aaKnown RBP17.76■□□□□ 0.43
C9orf3-219ENST00000488186 CHMP2AO43633 222 aa17.76■□□□□ 0.43
C9orf3-219ENST00000488186 ZNF746Q6NUN9 644 aaPredicted RBP17.76■□□□□ 0.43
C9orf3-219ENST00000488186 SLC39A5Q6ZMH5 540 aa17.76■□□□□ 0.43
C9orf3-219ENST00000488186 SMAP1Q8IYB5 467 aaPredicted RBP17.76■□□□□ 0.43
C9orf3-219ENST00000488186 ETNPPLQ8TBG4 499 aa17.76■□□□□ 0.43
C9orf3-219ENST00000488186 DPF3Q92784 378 aa17.76■□□□□ 0.43
C9orf3-219ENST00000488186 GJA10Q969M2 543 aa17.76■□□□□ 0.43
C9orf3-219ENST00000488186 ZNF215Q9UL58 517 aaPredicted RBP17.76■□□□□ 0.43
C9orf3-219ENST00000488186 NR2E3Q9Y5X4 410 aa17.76■□□□□ 0.43
C9orf3-219ENST00000488186 GSTTP1A0A1W2PQM5 241 aa17.75■□□□□ 0.43
C9orf3-219ENST00000488186 LGALS2P05162 132 aa17.75■□□□□ 0.43
C9orf3-219ENST00000488186 PSAPP07602 524 aa17.75■□□□□ 0.43
C9orf3-219ENST00000488186 ZNF286BP0CG31 522 aa17.75■□□□□ 0.43
C9orf3-219ENST00000488186 TXKP42681 527 aa17.75■□□□□ 0.43
C9orf3-219ENST00000488186 PSMC6P62333 389 aa17.75■□□□□ 0.43
C9orf3-219ENST00000488186 ITGA7Q13683 1181 aa17.75■□□□□ 0.43
C9orf3-219ENST00000488186 FAM47CQ5HY64 1035 aa17.75■□□□□ 0.43
C9orf3-219ENST00000488186 FOXD4L5Q5VV16 416 aaPredicted RBP17.75■□□□□ 0.43
C9orf3-219ENST00000488186 FAM160B1Q5W0V3 765 aa17.75■□□□□ 0.43
C9orf3-219ENST00000488186 MIER3Q7Z3K6 550 aa17.75■□□□□ 0.43
C9orf3-219ENST00000488186 FOXD4L4Q8WXT5 416 aaPredicted RBP17.75■□□□□ 0.43
C9orf3-219ENST00000488186 SMARCAD1Q9H4L7 1026 aa17.75■□□□□ 0.43
C9orf3-219ENST00000488186 KCNMB3Q9NPA1 279 aa17.75■□□□□ 0.43
C9orf3-219ENST00000488186 PCDHA12Q9UN75 941 aa17.75■□□□□ 0.43
C9orf3-219ENST00000488186 PCDHA10Q9Y5I2 948 aa17.75■□□□□ 0.43
C9orf3-219ENST00000488186 WDR64B1ANS9 1081 aa17.74■□□□□ 0.43
C9orf3-219ENST00000488186 H3BRB1 525 aa17.74■□□□□ 0.43
C9orf3-219ENST00000488186 PSMD10O75832 226 aa17.74■□□□□ 0.43
C9orf3-219ENST00000488186 SFNP31947 248 aa17.74■□□□□ 0.43
C9orf3-219ENST00000488186 PSEN2P49810 448 aa17.74■□□□□ 0.43
C9orf3-219ENST00000488186 TOB1P50616 345 aaPredicted RBP17.74■□□□□ 0.43
C9orf3-219ENST00000488186 JAK3P52333 1124 aa17.74■□□□□ 0.43
C9orf3-219ENST00000488186 NBR1Q14596 966 aa17.74■□□□□ 0.43
C9orf3-219ENST00000488186 MFSD10Q14728 455 aa17.74■□□□□ 0.43
C9orf3-219ENST00000488186 C7orf31Q8N865 590 aa17.74■□□□□ 0.43
C9orf3-219ENST00000488186 TUT1Q9H6E5 874 aaKnown RBP17.74■□□□□ 0.43
C9orf3-219ENST00000488186 DISC1Q9NRI5 854 aa17.74■□□□□ 0.43
C9orf3-219ENST00000488186 CEP131Q9UPN4 1083 aa17.74■□□□□ 0.43
C9orf3-219ENST00000488186 ATP11BQ9Y2G3 1177 aa17.74■□□□□ 0.43
C9orf3-219ENST00000488186 PCDHB6Q9Y5E3 794 aa17.74■□□□□ 0.43
C9orf3-219ENST00000488186 ARVCFO00192 962 aa17.73■□□□□ 0.43
C9orf3-219ENST00000488186 WNT7AO00755 349 aa17.73■□□□□ 0.43
C9orf3-219ENST00000488186 EVI5O60447 810 aa17.73■□□□□ 0.43
C9orf3-219ENST00000488186 CCNE2O96020 404 aa17.73■□□□□ 0.43
C9orf3-219ENST00000488186 OR52Z1P0C646 297 aa17.73■□□□□ 0.43
C9orf3-219ENST00000488186 SUPT20HL2P0C7V6 817 aa17.73■□□□□ 0.43
C9orf3-219ENST00000488186 ZSCAN22P10073 491 aaPredicted RBP17.73■□□□□ 0.43
C9orf3-219ENST00000488186 HOXD8P13378 290 aaPredicted RBP17.73■□□□□ 0.43
C9orf3-219ENST00000488186 STAT5BP51692 787 aa17.73■□□□□ 0.43
C9orf3-219ENST00000488186 RESTQ13127 1097 aa17.73■□□□□ 0.43
C9orf3-219ENST00000488186 KIAA0753Q2KHM9 967 aa17.73■□□□□ 0.43
C9orf3-219ENST00000488186 TMEM266Q2M3C6 531 aa17.73■□□□□ 0.43
C9orf3-219ENST00000488186 NBPF20Q3BBV1 942 aa17.73■□□□□ 0.43
C9orf3-219ENST00000488186 PRPF38BQ5VTL8 546 aaKnown RBP17.73■□□□□ 0.43
C9orf3-219ENST00000488186 NCAPH2Q6IBW4 605 aa17.73■□□□□ 0.43
C9orf3-219ENST00000488186 SWSAP1Q6NVH7 229 aa17.73■□□□□ 0.43
C9orf3-219ENST00000488186 ABHD15Q6UXT9 468 aa17.73■□□□□ 0.43
C9orf3-219ENST00000488186 CKAP2LQ8IYA6 745 aa17.73■□□□□ 0.43
C9orf3-219ENST00000488186 HAS1Q92839 578 aa17.73■□□□□ 0.43
C9orf3-219ENST00000488186 TNPO1Q92973 898 aaKnown RBP17.73■□□□□ 0.43
C9orf3-219ENST00000488186 UNC45AQ9H3U1 944 aa17.73■□□□□ 0.43
C9orf3-219ENST00000488186 TTC12Q9H892 705 aaPredicted RBP17.73■□□□□ 0.43
C9orf3-219ENST00000488186 ERAP1Q9NZ08 941 aa17.73■□□□□ 0.43
C9orf3-219ENST00000488186 TELO2Q9Y4R8 837 aa17.73■□□□□ 0.43
C9orf3-219ENST00000488186 MROH7Q68CQ1 1323 aa17.72■□□□□ 0.43
C9orf3-219ENST00000488186 SCN10AQ9Y5Y9 1956 aa17.72■□□□□ 0.43
C9orf3-219ENST00000488186 DCDC2CA8MYV0 355 aa17.72■□□□□ 0.43
C9orf3-219ENST00000488186 TLR3O15455 904 aaKnown RBP17.72■□□□□ 0.43
C9orf3-219ENST00000488186 ATG7O95352 703 aa17.72■□□□□ 0.43
C9orf3-219ENST00000488186 RTP1P59025 263 aa17.72■□□□□ 0.43
C9orf3-219ENST00000488186 PTGDRQ13258 359 aa17.72■□□□□ 0.43
C9orf3-219ENST00000488186 LRRC26Q2I0M4 334 aa17.72■□□□□ 0.43
C9orf3-219ENST00000488186 RDM1Q8NG50 284 aa17.72■□□□□ 0.43
C9orf3-219ENST00000488186 TOX2Q96NM4 488 aa17.72■□□□□ 0.43
C9orf3-219ENST00000488186 C16orf70Q9BSU1 422 aa17.72■□□□□ 0.43
C9orf3-219ENST00000488186 TMEM60Q9H2L4 133 aa17.72■□□□□ 0.43
C9orf3-219ENST00000488186 ZNF302Q9NR11 478 aa17.72■□□□□ 0.43
C9orf3-219ENST00000488186 DOCK5Q9H7D0 1870 aa17.71■□□□□ 0.43
C9orf3-219ENST00000488186 LAD1O00515 517 aa17.71■□□□□ 0.43
C9orf3-219ENST00000488186 PQBP1O60828 265 aaKnown RBP17.71■□□□□ 0.43
C9orf3-219ENST00000488186 BMP15O95972 392 aa17.71■□□□□ 0.43
C9orf3-219ENST00000488186 F2P00734 622 aa17.71■□□□□ 0.43
C9orf3-219ENST00000488186 MARK3P27448 753 aa17.71■□□□□ 0.43
C9orf3-219ENST00000488186 TECP42680 631 aa17.71■□□□□ 0.43
C9orf3-219ENST00000488186 PDXDC2PQ6P474 469 aa17.71■□□□□ 0.43
C9orf3-219ENST00000488186 NFRKBQ6P4R8 1299 aa17.71■□□□□ 0.43
C9orf3-219ENST00000488186 PLPPR4Q7Z2D5 763 aa17.71■□□□□ 0.43
C9orf3-219ENST00000488186 ANKRD33Q7Z3H0 272 aa17.71■□□□□ 0.43
C9orf3-219ENST00000488186 TRIM50Q86XT4 487 aa17.71■□□□□ 0.43
C9orf3-219ENST00000488186 SLC43A3Q8NBI5 491 aa17.71■□□□□ 0.43
C9orf3-219ENST00000488186 KAT2BQ92831 832 aa17.71■□□□□ 0.43
C9orf3-219ENST00000488186 ZNF396Q96N95 335 aaPredicted RBP17.71■□□□□ 0.43
C9orf3-219ENST00000488186 MTMR9Q96QG7 549 aa17.71■□□□□ 0.43
C9orf3-219ENST00000488186 RAB34Q9BZG1 259 aa17.71■□□□□ 0.43
C9orf3-219ENST00000488186 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms